Variant report

Variant	esv3337355
Chromosome Location	chr10:16207353-16220232
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 191 )
Associated
traits (count: 47 )

Variant overlapped rSNPs/rCNVs (count:191 , 50 per page) page: 1 2 3 4

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs368642631	chr10:16217417-16217418	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs549933294	chr10:16217467-16217468	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs561644474	chr10:16217470-16217471	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs4575155	chr10:16217471-16217472	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
5	rs547387572	chr10:16217485-16217486	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs71265216	chr10:16217490-16217491	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs565798005	chr10:16217505-16217506	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs539725038	chr10:16217515-16217516	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs551286260	chr10:16217523-16217524	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs113629092	chr10:16217547-16217548	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs552466728	chr10:16217549-16217550	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs7910600	chr10:16217554-16217555	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
13	rs555471333	chr10:16217561-16217562	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs71250484	chr10:16217577-16217578	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs573820168	chr10:16217586-16217587	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs552956353	chr10:16217610-16217611	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs76231330	chr10:16217633-16217634	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs534668025	chr10:16217634-16217635	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs372093391	chr10:16217658-16217659	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs74874375	chr10:16217661-16217662	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs79519127	chr10:16217667-16217668	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs201268581	chr10:16217670-16217671	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs578183319	chr10:16217678-16217679	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs545722216	chr10:16217688-16217689	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs7910976	chr10:16217700-16217701	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs188210004	chr10:16217728-16217729	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs543263664	chr10:16217732-16217733	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs561731285	chr10:16217778-16217779	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs529008256	chr10:16217798-16217799	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs191918499	chr10:16217802-16217803	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs34495086	chr10:16217806-16217807	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs183772303	chr10:16217810-16217811	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs369862579	chr10:16217847-16217848	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs533070571	chr10:16217876-16217877	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs188298265	chr10:16217892-16217893	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs11253836	chr10:16217895-16217896	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
37	rs536823983	chr10:16217902-16217903	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs145789066	chr10:16217903-16217904	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs181801654	chr10:16217940-16217941	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs184997846	chr10:16217948-16217949	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs553080631	chr10:16217959-16217960	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs190498281	chr10:16217965-16217966	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs113953852	chr10:16217981-16217982	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs538941089	chr10:16217982-16217983	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs557658801	chr10:16218004-16218005	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs181772904	chr10:16218006-16218007	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs186937786	chr10:16218008-16218009	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs191398798	chr10:16218021-16218022	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs573652474	chr10:16218027-16218028	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs541162018	chr10:16218035-16218036	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:47)

Disease	PMID	Source
Breast cancer	22032731	CNVD
Medulloblastoma	16783165	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Phyllodes tumor	17334353	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Gastric cancer	17908304	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Medulloblastoma	21979893	CNVD
Melanoma	18172304	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Ewing''s sarcoma	17952124	CNVD
Oral cancer	21386901	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	20724749	CNVD
Renal cell carcinoma	18765545	CNVD
Autism	22495311	CNVD
Neurodevelopmental disorder	22521361	CNVD
DiGeorge-Velo cardiofacial	22470819	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Breast cancer	21364760	CNVD
Esophageal cancer	21851588	CNVD
Adrenocortical carcinoma	18281524	CNVD
Digeorge syndrome	17576883	CNVD
Lung cancer	16773561	CNVD
Velocardiofacial syndrome	17576883	CNVD
Intracranial aneurysm	16715129	CNVD
Breast cancer	22048815	CNVD
Myelofibrosis	22110671	CNVD
Cutaneous T-cell lymphoma	21881587	CNVD
Hepatocellular carcinoma	16750200	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Thymic lymphomas tumor	22700994	CNVD

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:16217400-16239000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr10:16220200-16223800	Weak transcription	NHDF-Ad	bronchial

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