Variant report

Variant	esv3338994
Chromosome Location	chr11:26573767-26574558
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 48 )
Associated
traits (count: 53 )

Variant overlapped rSNPs/rCNVs (count:48 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs151058143	chr11:26573812-26573813	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs367624	chr11:26573820-26573821	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
3	rs140097189	chr11:26573825-26573826	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs533730720	chr11:26573844-26573845	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs147940930	chr11:26573845-26573846	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs535847923	chr11:26573861-26573862	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs113697171	chr11:26573862-26573863	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs76470730	chr11:26573870-26573871	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs143553031	chr11:26573877-26573878	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs365243	chr11:26573887-26573888	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs567859208	chr11:26573896-26573897	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs187952865	chr11:26573982-26573983	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs556461372	chr11:26573984-26573985	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs568958135	chr11:26573992-26573993	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs146794243	chr11:26573993-26573994	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs569078635	chr11:26574005-26574006	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs141065100	chr11:26574048-26574049	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs190637229	chr11:26574057-26574058	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs548240872	chr11:26574101-26574102	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs374868	chr11:26574114-26574115	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
21	rs535953481	chr11:26574123-26574124	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs544423247	chr11:26574142-26574143	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs9734458	chr11:26574160-26574161	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
24	rs533482479	chr11:26574164-26574165	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs370647	chr11:26574185-26574186	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
26	rs35082898	chr11:26574236-26574237	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs401988	chr11:26574280-26574281	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs11324993	chr11:26574286-26574287	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs386751920	chr11:26574292-26574293	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs57507187	chr11:26574293-26574294	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs183267308	chr11:26574367-26574368	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs567979038	chr11:26574402-26574403	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs3108885	chr11:26574406-26574407	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
34	rs3105883	chr11:26574410-26574411	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
35	rs571708822	chr11:26574424-26574425	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs187544069	chr11:26574430-26574431	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs3105884	chr11:26574448-26574449	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
38	rs566220908	chr11:26574469-26574470	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs138812353	chr11:26574472-26574473	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs551985229	chr11:26574476-26574477	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs111419094	chr11:26574488-26574489	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs192278567	chr11:26574500-26574501	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs139708871	chr11:26574527-26574528	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs3105885	chr11:26574543-26574544	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs148509724	chr11:26574549-26574550	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs145559609	chr11:26574550-26574551	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs55886170	chr11:26574554-26574555	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs573901332	chr11:26574556-26574557	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:53)

Disease	PMID	Source
Burkitt''s lymphoma	19759907	CNVD
Breast cancer	17603634	CNVD
Medulloblastoma	21979893	CNVD
Thyroid cancer	19087340	CNVD
Melanoma	18172304	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Wilms tumour	21544195	CNVD
Parathyroid adenoma	22454399	CNVD
Chordoma	21602918	CNVD
Breast cancer	21949216	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	19222835	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Beckwith-Wiedemann syndrome	21518781	CNVD
Wilms tumour	21518781	CNVD
Hepatoblastoma	21518781	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Gastric cancer	17908304	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Multiple myeloma	20724749	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Autism	22495311	CNVD
Prostate cancer	18632612	CNVD
Lung cancer	18438408	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Non-small cell lung cancer	21385341	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	21785460	CNVD
Medulloblastoma	16783165	CNVD
small cell lung cancer	20016488	CNVD
Congenital diaphragmatic hernia	21525063	CNVD
Renal cell carcinoma	18194544	CNVD
Potocki-Shaffer syndrome	19222835	CNVD
WAGR syndrome	19222835	CNVD
Chordoma	18071362	CNVD
Autism	22102821	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Breast cancer	21364760	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Neuroticism	17667963	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:26565000-26599200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin

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