Variant report

Variant esv3339215
Chromosome Location chr2:99550420-99554818
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:409 , 50 per page) page: 1 2 3 4 5 6 7 ... 9
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:99538000-99550800 Weak transcription Gastric stomach
2 chr2:99538400-99551400 Weak transcription Esophagus oesophagus
3 chr2:99543800-99551200 Weak transcription HMEC breast
4 chr2:99543800-99551400 Weak transcription Pancreas Pancrea
5 chr2:99548600-99551200 Weak transcription Pancreatic Islets Pancreatic Islet
6 chr2:99549400-99553800 Active TSS Brain Anterior Caudate brain
7 chr2:99550000-99553800 Active TSS Brain Angular Gyrus brain
8 chr2:99550200-99550600 Bivalent/Poised TSS Brain Inferior Temporal Lobe brain
9 chr2:99550400-99551400 Weak transcription Cortex derived primary cultured neurospheres brain
10 chr2:99550600-99551400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
11 chr2:99550800-99551000 Enhancers Gastric stomach
12 chr2:99550800-99553200 Active TSS Brain Inferior Temporal Lobe brain
13 chr2:99551200-99551400 Enhancers HMEC breast
14 chr2:99551200-99553800 Active TSS Brain Dorsolateral Prefrontal Cortex brain
15 chr2:99551200-99554000 Active TSS Pancreatic Islets Pancreatic Islet
16 chr2:99551400-99551600 Enhancers Breast Myoepithelial Primary Cells Breast
17 chr2:99551400-99551600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr2:99551400-99551600 Enhancers Pancreas Pancrea
19 chr2:99551400-99551800 Bivalent/Poised TSS Brain Cingulate Gyrus brain
20 chr2:99551400-99552000 Enhancers Esophagus oesophagus
21 chr2:99551400-99552000 Bivalent Enhancer Fetal Brain Female brain
22 chr2:99551400-99552000 Bivalent Enhancer Fetal Muscle Leg muscle
23 chr2:99551400-99552200 Flanking Active TSS Cortex derived primary cultured neurospheres brain
24 chr2:99551400-99552200 Flanking Active TSS HMEC breast
25 chr2:99551400-99553800 Bivalent/Poised TSS Brain Hippocampus Middle brain
26 chr2:99551600-99551800 Bivalent Enhancer ES-I3 Cell Line embryonic stem cell
27 chr2:99551600-99551800 Bivalent Enhancer HUES48 Cell Line embryonic stem cell
28 chr2:99551600-99551800 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
29 chr2:99551600-99551800 Bivalent Enhancer iPS-18 Cell Line embryonic stem cell
30 chr2:99551600-99551800 Bivalent Enhancer iPS-20b Cell Line embryonic stem cell
31 chr2:99551600-99551800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr2:99551600-99551800 Bivalent Enhancer Primary T killer memory cells from peripheral blood blood
33 chr2:99551600-99551800 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
34 chr2:99551600-99551800 Bivalent Enhancer Duodenum Smooth Muscle Duodenum
35 chr2:99551600-99551800 Enhancers Ovary ovary
36 chr2:99551600-99551800 Flanking Active TSS Pancreas Pancrea
37 chr2:99551600-99552000 Bivalent Enhancer H1 Cell Line embryonic stem cell
38 chr2:99551600-99552000 Bivalent Enhancer ES-UCSF4 Cell Line embryonic stem cell
39 chr2:99551600-99552000 Bivalent Enhancer Primary neutrophils fromperipheralblood blood
40 chr2:99551600-99552000 Bivalent/Poised TSS Primary hematopoietic stem cells blood
41 chr2:99551600-99552000 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin03 Skin
42 chr2:99551600-99552000 Bivalent Enhancer Liver Liver
43 chr2:99551600-99552000 Bivalent Enhancer Fetal Muscle Trunk muscle
44 chr2:99551600-99552000 Bivalent Enhancer HepG2 liver
45 chr2:99551600-99552200 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
46 chr2:99551600-99552200 Bivalent Enhancer Primary T helper naive cells from peripheral blood blood
47 chr2:99551600-99552200 Bivalent/Poised TSS Muscle Satellite Cultured Cells --
48 chr2:99551600-99552200 Flanking Bivalent TSS/Enh Fetal Kidney kidney
49 chr2:99551600-99552200 Flanking Bivalent TSS/Enh Skeletal Muscle Female skeletal muscle
50 chr2:99551600-99552200 Flanking Bivalent TSS/Enh Stomach Smooth Muscle stomach

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