Variant report

Variant	esv3342461
Chromosome Location	chr10:1480986-1482435
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 88 )
Associated
traits (count: 57 )

Variant overlapped rSNPs/rCNVs (count:88 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs12761479	chr10:1480991-1480992	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs12778352	chr10:1480992-1480993	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs561364014	chr10:1480993-1480994	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs71500103	chr10:1481006-1481007	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs78355249	chr10:1481021-1481022	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs75013465	chr10:1481031-1481032	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs77292047	chr10:1481038-1481039	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs74577225	chr10:1481039-1481040	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs11250511	chr10:1481047-1481048	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs10903447	chr10:1481103-1481104	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs113601884	chr10:1481108-1481109	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs2820648	chr10:1481142-1481143	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs530300307	chr10:1481174-1481175	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs547006709	chr10:1481175-1481176	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs567127086	chr10:1481176-1481177	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs531996981	chr10:1481273-1481274	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs371680916	chr10:1481278-1481279	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs374916230	chr10:1481362-1481363	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs11250512	chr10:1481403-1481404	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs201583600	chr10:1481404-1481405	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs369373793	chr10:1481407-1481408	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs568617523	chr10:1481409-1481410	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs11250513	chr10:1481410-1481411	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs58286784	chr10:1481411-1481412	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs11250514	chr10:1481437-1481438	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs11250515	chr10:1481439-1481440	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs373426302	chr10:1481485-1481486	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs2805552	chr10:1481494-1481495	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs113665510	chr10:1481520-1481521	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs377429301	chr10:1481536-1481537	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs537598717	chr10:1481545-1481546	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs200348915	chr10:1481597-1481598	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs554636478	chr10:1481604-1481605	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs56690474	chr10:1481621-1481622	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs59311419	chr10:1481627-1481628	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs568193789	chr10:1481653-1481654	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs533965723	chr10:1481661-1481662	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs59532029	chr10:1481676-1481677	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs553801862	chr10:1481677-1481678	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs59739460	chr10:1481683-1481684	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs11250516	chr10:1481711-1481712	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs377363163	chr10:1481718-1481719	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs11250517	chr10:1481719-1481720	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
44	rs11250518	chr10:1481721-1481722	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs79086657	chr10:1481728-1481729	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs57634584	chr10:1481737-1481738	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs58697730	chr10:1481739-1481740	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs61135792	chr10:1481743-1481744	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs375115824	chr10:1481746-1481747	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs61055215	chr10:1481757-1481758	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:57)

Disease	PMID	Source
Myelofibrosis	22110671	CNVD
Breast cancer	20409316	CNVD
Gastric adenocarcinoma	19115996	CNVD
Pilocytic astrocytoma	18622384	CNVD
Pilomyxoid astrocytoma	18622384	CNVD
Breast cancer	17133270	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Cancer	21129771	CNVD
Sudden cardiac death	19188705	CNVD
Digeorge syndrome	22283845	CNVD
Colorectal cancer	20709793	CNVD
Wilms tumour	19047088	CNVD
Hepatocellular carcinoma	16750200	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	21183584	CNVD
Barakat syndrome	22470819	CNVD
Melanoma	18172304	CNVD
Ovarian cancer	21720365	CNVD
Autism	18414403	CNVD
Malignant melanoma	18718029	CNVD
Breast cancer	22032731	CNVD
Medulloblastoma	16783165	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Phyllodes tumor	17334353	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Gastric cancer	17908304	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Medulloblastoma	21979893	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Melanoma	17363583	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Ewing''s sarcoma	17952124	CNVD
Oral cancer	21386901	CNVD
Breast cancer	21785460	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Breast cancer	21509527	CNVD
Prostate cancer	18632612	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21858162	CNVD
Breast cancer	21364760	CNVD
Acute lymphoblastic leukemia	20724749	CNVD
Autism	22495311	CNVD
Autism	22543975	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Cancer	20164919	CNVD

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:1475800-1482200	Weak transcription	Gastric	stomach
2	chr10:1478000-1484200	Weak transcription	HUES64 Cell Line	embryonic stem cell
3	chr10:1480400-1482800	Weak transcription	Dnd41	blood
4	chr10:1482200-1483200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
5	chr10:1482200-1483400	Enhancers	Gastric	stomach
6	chr10:1482400-1483200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
7	chr10:1482400-1483200	Enhancers	Liver	Liver

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