The 2.0 version of rSNPBase

Variant report

Variant esv3342479
Chromosome Location chr6:15393497-15393774
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:15365000-15402800 Weak transcription Dnd41 blood
2 chr6:15385200-15398400 Weak transcription Primary T regulatory cells fromperipheralblood blood
3 chr6:15387800-15399200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr6:15388000-15399200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr6:15389400-15393800 Enhancers iPS-15b Cell Line embryonic stem cell
6 chr6:15389800-15397600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
7 chr6:15390200-15397400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr6:15390600-15397200 Weak transcription Primary T killer memory cells from peripheral blood blood
9 chr6:15390600-15397600 Weak transcription Primary T helper cells fromperipheralblood blood
10 chr6:15390600-15399800 Weak transcription Muscle Satellite Cultured Cells --
11 chr6:15390800-15398000 Weak transcription Primary T helper naive cells fromperipheralblood blood
12 chr6:15390800-15399000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
13 chr6:15390800-15399200 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr6:15390800-15399200 Weak transcription Sigmoid Colon Sigmoid Colon
15 chr6:15390800-15399200 Weak transcription A549 lung
16 chr6:15390800-15399400 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr6:15390800-15400000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr6:15390800-15400200 Weak transcription Aorta Aorta
19 chr6:15391000-15394400 Weak transcription Fetal Intestine Small intestine
20 chr6:15391000-15396000 Weak transcription Liver Liver
21 chr6:15391000-15396800 Weak transcription Small Intestine intestine
22 chr6:15391000-15399000 Weak transcription Primary neutrophils fromperipheralblood blood
23 chr6:15391000-15399000 Weak transcription Duodenum Mucosa Duodenum
24 chr6:15391000-15399200 Weak transcription HepG2 liver
25 chr6:15391000-15400000 Weak transcription Thymus Thymus
26 chr6:15391400-15393600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr6:15391600-15400200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr6:15391800-15397600 Weak transcription K562 blood
29 chr6:15391800-15398400 Weak transcription Monocytes-CD14+_RO01746 blood
30 chr6:15391800-15398800 Weak transcription Colon Smooth Muscle Colon
31 chr6:15391800-15399200 Weak transcription Stomach Mucosa stomach
32 chr6:15391800-15400200 Weak transcription Fetal Muscle Trunk muscle
33 chr6:15392000-15400200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr6:15392200-15394800 Weak transcription HUES48 Cell Line embryonic stem cell
35 chr6:15392200-15398000 Weak transcription Brain Angular Gyrus brain
36 chr6:15392200-15398400 Weak transcription Primary monocytes fromperipheralblood blood
37 chr6:15392200-15398800 Weak transcription Adipose Nuclei Adipose
38 chr6:15392200-15399000 Weak transcription Primary T cells fromperipheralblood blood
39 chr6:15392200-15399200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
40 chr6:15392200-15399200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr6:15392200-15400000 Weak transcription NHLF lung
42 chr6:15392400-15393600 Weak transcription Primary T cells from cord blood blood
43 chr6:15392400-15397000 Weak transcription ES-WA7 Cell Line embryonic stem cell
44 chr6:15392400-15399000 Weak transcription NHEK skin
45 chr6:15392400-15399200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr6:15392400-15400000 Weak transcription HMEC breast
47 chr6:15392600-15397600 Weak transcription Primary T helper cells PMA-I stimulated --
48 chr6:15392800-15394400 Weak transcription Fetal Thymus thymus
49 chr6:15392800-15396000 Weak transcription H9 Cell Line embryonic stem cell
50 chr6:15392800-15396200 Weak transcription HUES64 Cell Line embryonic stem cell

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Last update: Aug 31, 2015