Variant report
Variant | esv3343415 |
---|---|
Chromosome Location | chr19:28315698-28581894 |
allele | n/a |
Outlinks | Ensembl   UCSC |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr19:28314200-28319200 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
2 | chr19:28318400-28319600 | ZNF genes & repeats | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
3 | chr19:28318600-28319200 | ZNF genes & repeats | Aorta | Aorta |
4 | chr19:28319200-28320000 | Enhancers | Primary hematopoietic stem cells short term culture | blood |
5 | chr19:28320000-28320200 | ZNF genes & repeats | iPS DF 6.9 Cell Line | embryonic stem cell |
6 | chr19:28321800-28322200 | ZNF genes & repeats | HUES64 Cell Line | embryonic stem cell |
7 | chr19:28323800-28324000 | Enhancers | Right Atrium | heart |
8 | chr19:28323800-28324400 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
9 | chr19:28323800-28324600 | Enhancers | NHEK | skin |
10 | chr19:28329000-28329600 | Enhancers | Dnd41 | blood |
11 | chr19:28329400-28332200 | ZNF genes & repeats | HUES48 Cell Line | embryonic stem cell |
12 | chr19:28329600-28330400 | ZNF genes & repeats | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
13 | chr19:28329600-28331200 | Weak transcription | Dnd41 | blood |
14 | chr19:28331200-28331600 | Enhancers | Dnd41 | blood |
15 | chr19:28339000-28344000 | ZNF genes & repeats | ES-UCSF4 Cell Line | embryonic stem cell |
16 | chr19:28339200-28340200 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
17 | chr19:28339400-28340000 | ZNF genes & repeats | HepG2 | liver |
18 | chr19:28341400-28342800 | ZNF genes & repeats | Colonic Mucosa | Colon |
19 | chr19:28341400-28342800 | ZNF genes & repeats | Skeletal Muscle Male | skeletal muscle |
20 | chr19:28341800-28342800 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
21 | chr19:28342000-28343000 | ZNF genes & repeats | Gastric | stomach |
22 | chr19:28342000-28343000 | ZNF genes & repeats | Dnd41 | blood |
23 | chr19:28342200-28342800 | ZNF genes & repeats | Spleen | Spleen |
24 | chr19:28342200-28343000 | ZNF genes & repeats | Duodenum Mucosa | Duodenum |
25 | chr19:28342400-28343000 | ZNF genes & repeats | Adipose Nuclei | Adipose |
26 | chr19:28344000-28344400 | ZNF genes & repeats | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
27 | chr19:28349400-28352600 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
28 | chr19:28350000-28353200 | ZNF genes & repeats | Adipose Nuclei | Adipose |
29 | chr19:28350200-28353200 | ZNF genes & repeats | Duodenum Smooth Muscle | Duodenum |
30 | chr19:28356800-28357800 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
31 | chr19:28358600-28359600 | Enhancers | HSMMtube | muscle |
32 | chr19:28363200-28363800 | ZNF genes & repeats | Pancreas | Pancrea |
33 | chr19:28367600-28368600 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
34 | chr19:28368000-28373800 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
35 | chr19:28374600-28376200 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
36 | chr19:28375600-28377000 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
37 | chr19:28376200-28376400 | Flanking Active TSS | ES-WA7 Cell Line | embryonic stem cell |
38 | chr19:28376400-28376800 | Enhancers | ES-WA7 Cell Line | embryonic stem cell |
39 | chr19:28377600-28378000 | Enhancers | HSMMtube | muscle |
40 | chr19:28378600-28378800 | ZNF genes & repeats | iPS-20b Cell Line | embryonic stem cell |
41 | chr19:28378600-28379400 | Active TSS | Fetal Heart | heart |
42 | chr19:28378800-28379200 | ZNF genes & repeats | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
43 | chr19:28379400-28379800 | Enhancers | Foreskin Melanocyte Primary Cells skin01 | Skin |
44 | chr19:28379400-28381000 | Weak transcription | Fetal Heart | heart |
45 | chr19:28380200-28389200 | ZNF genes & repeats | ES-UCSF4 Cell Line | embryonic stem cell |
46 | chr19:28381000-28381400 | Active TSS | Fetal Heart | heart |
47 | chr19:28384800-28385600 | Enhancers | Foreskin Melanocyte Primary Cells skin01 | Skin |
48 | chr19:28385200-28385400 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
49 | chr19:28385600-28386600 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
50 | chr19:28387200-28387400 | Bivalent/Poised TSS | Foreskin Melanocyte Primary Cells skin01 | Skin |