Variant report

Variant esv3343415
Chromosome Location chr19:28315698-28581894
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:378 , 50 per page) page: 1 2 3 4 5 6 7 8
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:28314200-28319200 Weak transcription Primary hematopoietic stem cells short term culture blood
2 chr19:28318400-28319600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
3 chr19:28318600-28319200 ZNF genes & repeats Aorta Aorta
4 chr19:28319200-28320000 Enhancers Primary hematopoietic stem cells short term culture blood
5 chr19:28320000-28320200 ZNF genes & repeats iPS DF 6.9 Cell Line embryonic stem cell
6 chr19:28321800-28322200 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
7 chr19:28323800-28324000 Enhancers Right Atrium heart
8 chr19:28323800-28324400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr19:28323800-28324600 Enhancers NHEK skin
10 chr19:28329000-28329600 Enhancers Dnd41 blood
11 chr19:28329400-28332200 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
12 chr19:28329600-28330400 ZNF genes & repeats H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
13 chr19:28329600-28331200 Weak transcription Dnd41 blood
14 chr19:28331200-28331600 Enhancers Dnd41 blood
15 chr19:28339000-28344000 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
16 chr19:28339200-28340200 Enhancers Breast Myoepithelial Primary Cells Breast
17 chr19:28339400-28340000 ZNF genes & repeats HepG2 liver
18 chr19:28341400-28342800 ZNF genes & repeats Colonic Mucosa Colon
19 chr19:28341400-28342800 ZNF genes & repeats Skeletal Muscle Male skeletal muscle
20 chr19:28341800-28342800 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
21 chr19:28342000-28343000 ZNF genes & repeats Gastric stomach
22 chr19:28342000-28343000 ZNF genes & repeats Dnd41 blood
23 chr19:28342200-28342800 ZNF genes & repeats Spleen Spleen
24 chr19:28342200-28343000 ZNF genes & repeats Duodenum Mucosa Duodenum
25 chr19:28342400-28343000 ZNF genes & repeats Adipose Nuclei Adipose
26 chr19:28344000-28344400 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr19:28349400-28352600 Enhancers Breast Myoepithelial Primary Cells Breast
28 chr19:28350000-28353200 ZNF genes & repeats Adipose Nuclei Adipose
29 chr19:28350200-28353200 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
30 chr19:28356800-28357800 Enhancers Breast Myoepithelial Primary Cells Breast
31 chr19:28358600-28359600 Enhancers HSMMtube muscle
32 chr19:28363200-28363800 ZNF genes & repeats Pancreas Pancrea
33 chr19:28367600-28368600 Enhancers ES-I3 Cell Line embryonic stem cell
34 chr19:28368000-28373800 Weak transcription Pancreatic Islets Pancreatic Islet
35 chr19:28374600-28376200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
36 chr19:28375600-28377000 Enhancers ES-I3 Cell Line embryonic stem cell
37 chr19:28376200-28376400 Flanking Active TSS ES-WA7 Cell Line embryonic stem cell
38 chr19:28376400-28376800 Enhancers ES-WA7 Cell Line embryonic stem cell
39 chr19:28377600-28378000 Enhancers HSMMtube muscle
40 chr19:28378600-28378800 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
41 chr19:28378600-28379400 Active TSS Fetal Heart heart
42 chr19:28378800-28379200 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
43 chr19:28379400-28379800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
44 chr19:28379400-28381000 Weak transcription Fetal Heart heart
45 chr19:28380200-28389200 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
46 chr19:28381000-28381400 Active TSS Fetal Heart heart
47 chr19:28384800-28385600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
48 chr19:28385200-28385400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
49 chr19:28385600-28386600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
50 chr19:28387200-28387400 Bivalent/Poised TSS Foreskin Melanocyte Primary Cells skin01 Skin

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