No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs376524352 |
chr1:161695560-161695561 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Active TSS Bivalent Enhancer Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs570646816 |
chr1:161695571-161695572 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Active TSS Bivalent Enhancer Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs539222646 |
chr1:161695588-161695589 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Active TSS Bivalent Enhancer Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs56368909 |
chr1:161695602-161695603 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Enhancers Bivalent Enhancer
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs373956497 |
chr1:161695612-161695613 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Enhancers Bivalent Enhancer
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs141567912 |
chr1:161695623-161695624 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Enhancers Bivalent Enhancer
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs576557871 |
chr1:161695632-161695633 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Enhancers Bivalent Enhancer
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs7520519 |
chr1:161695639-161695640 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Enhancers Bivalent Enhancer
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
9 |
rs35126350 |
chr1:161695666-161695667 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Enhancers Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs555783403 |
chr1:161695678-161695679 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Enhancers Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs376420928 |
chr1:161695713-161695714 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Enhancers Bivalent Enhancer
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs139796104 |
chr1:161695723-161695724 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Enhancers Bivalent Enhancer
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs371919304 |
chr1:161695751-161695752 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Enhancers Bivalent Enhancer
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs546900428 |
chr1:161695775-161695776 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Enhancers Bivalent Enhancer
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs548692484 |
chr1:161695778-161695779 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Enhancers Bivalent Enhancer
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs200243110 |
chr1:161695786-161695787 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Enhancers Bivalent Enhancer
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs3738330 |
chr1:161695837-161695838 |
Bivalent/Poised TSS Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs372463922 |
chr1:161695853-161695854 |
Bivalent/Poised TSS Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs375748940 |
chr1:161695886-161695887 |
Bivalent/Poised TSS Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs377445918 |
chr1:161695899-161695900 |
Bivalent/Poised TSS Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs568436929 |
chr1:161695903-161695904 |
Bivalent/Poised TSS Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs376538728 |
chr1:161695942-161695943 |
Bivalent/Poised TSS Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Enhancers
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs536465503 |
chr1:161695943-161695944 |
Bivalent/Poised TSS Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Enhancers
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs138973877 |
chr1:161695949-161695950 |
Bivalent/Poised TSS Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Enhancers
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs560704170 |
chr1:161696005-161696006 |
Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs533584562 |
chr1:161696006-161696007 |
Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs1417582 |
chr1:161696088-161696089 |
Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS
|
Chromatin interactive region
|
5 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
28 |
rs562291750 |
chr1:161696107-161696108 |
Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs372640903 |
chr1:161696136-161696137 |
Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs5778228 |
chr1:161696150-161696151 |
Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs531294203 |
chr1:161696173-161696174 |
Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs182416412 |
chr1:161696203-161696204 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs561323347 |
chr1:161696260-161696261 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs559172201 |
chr1:161696318-161696319 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs527262696 |
chr1:161696349-161696350 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs573068237 |
chr1:161696369-161696370 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs114727710 |
chr1:161696381-161696382 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs375372824 |
chr1:161696389-161696390 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs117649845 |
chr1:161696390-161696391 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs539623074 |
chr1:161696464-161696465 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs549706716 |
chr1:161696466-161696467 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs371131821 |
chr1:161696489-161696490 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs374770887 |
chr1:161696495-161696496 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs570198587 |
chr1:161696509-161696510 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs202042884 |
chr1:161696531-161696532 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs555871257 |
chr1:161696586-161696587 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs200268538 |
chr1:161696648-161696649 |
Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs200633919 |
chr1:161696663-161696664 |
Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs112940407 |
chr1:161696669-161696670 |
Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs369928909 |
chr1:161696683-161696684 |
Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|