No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs577800297 |
chr1:247273885-247273886 |
Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs201871095 |
chr1:247273890-247273891 |
Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs74163730 |
chr1:247273897-247273898 |
Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs533816806 |
chr1:247273902-247273903 |
Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs139504369 |
chr1:247273920-247273921 |
Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs375111634 |
chr1:247273976-247273977 |
Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs116304437 |
chr1:247274016-247274017 |
Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Weak transcription
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs373161230 |
chr1:247274024-247274025 |
Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Weak transcription
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs539567869 |
chr1:247274054-247274055 |
Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Weak transcription
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs114913481 |
chr1:247274055-247274056 |
Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Weak transcription
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs576015586 |
chr1:247274067-247274068 |
Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Weak transcription
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs541812750 |
chr1:247274104-247274105 |
Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Weak transcription
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs369902233 |
chr1:247274133-247274134 |
Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Weak transcription
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs542484228 |
chr1:247274158-247274159 |
Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Weak transcription
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs575095580 |
chr1:247274191-247274192 |
Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Weak transcription
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs540511950 |
chr1:247274193-247274194 |
Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Weak transcription
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs138275002 |
chr1:247274200-247274201 |
Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Enhancers Flanking Active TSS Active TSS Weak transcription
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs74152930 |
chr1:247274215-247274216 |
Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Weak transcription Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
19 |
rs552290535 |
chr1:247274293-247274294 |
Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Weak transcription Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs12140983 |
chr1:247274351-247274352 |
Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Weak transcription Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
21 |
rs531658373 |
chr1:247274354-247274355 |
Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Weak transcription Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs149613325 |
chr1:247274359-247274360 |
Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Weak transcription Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs568328177 |
chr1:247274379-247274380 |
Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Weak transcription Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs372844861 |
chr1:247274409-247274410 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs73135914 |
chr1:247274484-247274485 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs181391973 |
chr1:247274516-247274517 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs539655573 |
chr1:247274527-247274528 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs113338290 |
chr1:247274540-247274541 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs556349106 |
chr1:247274575-247274576 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs569755137 |
chr1:247274576-247274577 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs547457449 |
chr1:247274588-247274589 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs114948365 |
chr1:247274638-247274639 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs12031553 |
chr1:247274701-247274702 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs571928030 |
chr1:247274740-247274741 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs540573120 |
chr1:247274753-247274754 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs554036898 |
chr1:247274770-247274771 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs143099468 |
chr1:247274839-247274840 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs545987988 |
chr1:247274854-247274855 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs562909507 |
chr1:247274861-247274862 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs531848129 |
chr1:247274873-247274874 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs369865565 |
chr1:247274883-247274884 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs73135916 |
chr1:247274899-247274900 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs562139376 |
chr1:247274987-247274988 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs527682577 |
chr1:247275000-247275001 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs551464466 |
chr1:247275013-247275014 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs547773966 |
chr1:247275054-247275055 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs570763569 |
chr1:247275068-247275069 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs533235929 |
chr1:247275083-247275084 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs377558360 |
chr1:247275091-247275092 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs549965032 |
chr1:247275208-247275209 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer Enhancers
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|