Variant report

Variant	esv3346687
Chromosome Location	chr13:76106451-76115149
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:663)
CpG islands
(count:857)
Chromatin interactive
region (count:17)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:663 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr13:76111988-76112275	K562	blood:	n/a	n/a
2	ARID3A	chr13:76111847-76112381	HepG2	liver:	n/a	n/a
3	ATF2	chr13:76111559-76112389	GM12878	blood:	n/a	n/a
4	ATF2	chr13:76112008-76112514	H1-hESC	embryonic stem cell:	n/a	n/a
5	BACH1	chr13:76111716-76112543	H1-hESC	embryonic stem cell:	n/a	n/a
6	BCL3	chr13:76112015-76112538	A549	lung:	n/a	n/a
7	BCLAF1	chr13:76111591-76112186	GM12878	blood:	n/a	n/a
8	BHLHE40	chr13:76111942-76112433	A549	lung:	n/a	n/a
9	BHLHE40	chr13:76111540-76112825	GM12878	blood:	n/a	n/a
10	BHLHE40	chr13:76111626-76112484	HepG2	liver:	n/a	n/a
11	BHLHE40	chr13:76111845-76112497	K562	blood:	n/a	n/a
12	BRCA1	chr13:76111647-76112440	HepG2	liver:	n/a	n/a
13	BRCA1	chr13:76111576-76112481	Hela-S3	cervix:	n/a	n/a
14	BRCA1	chr13:76111988-76112550	H1-hESC	embryonic stem cell:	n/a	n/a
15	BRCA1	chr13:76111808-76112292	GM12878	blood:	n/a	n/a
16	CCNT2	chr13:76111554-76112436	K562	blood:	n/a	n/a
17	CEBPD	chr13:76111665-76112069	HepG2	liver:	n/a	n/a
18	CHD1	chr13:76111515-76112632	GM12878	blood:	n/a	n/a
19	CHD1	chr13:76111504-76112506	H1-hESC	embryonic stem cell:	n/a	n/a
20	CHD1	chr13:76111165-76112724	IMR90	lung:	n/a	n/a
21	CHD2	chr13:76111716-76112448	HepG2	liver:	n/a	n/a
22	CHD2	chr13:76111594-76112513	Hela-S3	cervix:	n/a	n/a
23	CHD2	chr13:76111873-76112550	H1-hESC	embryonic stem cell:	n/a	n/a
24	CHD2	chr13:76111725-76112523	GM12878	blood:	n/a	n/a
25	CHD2	chr13:76111795-76112421	K562	blood:	n/a	n/a
26	CREB1	chr13:76111842-76112398	A549	lung:	n/a	n/a
27	CREB1	chr13:76111785-76112474	H1-hESC	embryonic stem cell:	n/a	n/a
28	CTBP2	chr13:76111695-76112410	H1-hESC	embryonic stem cell:	n/a	n/a
29	CTCF	chr13:76111880-76112030	GM12865	blood:	n/a	n/a
30	CTCF	chr13:76111980-76112130	HRPEpiC	eye:	n/a	n/a
31	CTCF	chr13:76111982-76112032	GM13977	blood:	n/a	n/a
32	CTCF	chr13:76111880-76112030	HEK293	kidney:	n/a	n/a
33	CTCF	chr13:76111840-76111990	HA-sp	spinal cord:	n/a	n/a
34	CTCF	chr13:76111940-76112090	GM12866	blood:	n/a	n/a
35	CTCF	chr13:76111900-76112050	HMF	breast:	n/a	n/a
36	CTCF	chr13:76111940-76112090	HCPEpiC	choroid plexus:	n/a	n/a
37	CTCF	chr13:76111920-76112070	HEEpiC	esophagus:	n/a	n/a
38	CTCF	chr13:76111960-76112110	GM12867	blood:	n/a	n/a
39	CTCF	chr13:76111920-76112070	HCT-116	colon:	n/a	n/a
40	CTCF	chr13:76111960-76112110	HUVEC	blood vessel:	n/a	n/a
41	CTCF	chr13:76111804-76112257	GM12878	blood:	n/a	n/a
42	CTCF	chr13:76110600-76110750	AG04450	lung:	n/a	n/a
43	CTCF	chr13:76111700-76111850	GM12866	blood:	n/a	n/a
44	CTCF	chr13:76111900-76112050	GM12869	blood:	n/a	n/a
45	CTCF	chr13:76111892-76112168	Lung_OC	lung:	n/a	n/a
46	CTCF	chr13:76111980-76112130	HA-sp	spinal cord:	n/a	n/a
47	CTCF	chr13:76111800-76111884	GM19239	blood:	n/a	n/a
48	CTCF	chr13:76111960-76112110	GM12864	blood:	n/a	n/a
49	CTCF	chr13:76111960-76112110	AG04450	lung:	n/a	n/a
50	CTCF	chr13:76111920-76112070	GM06990	blood:	n/a	n/a

(count:857 , 50 per page) page: 1 2 3 4 5 6 7 ... 18

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr13:76112187-76112237	LNCaP	prostate:	n/a
2	chr13:76111107-76111157	Hepatocyte	liver:	n/a
3	chr13:76111980-76112030	HCF	heart:	n/a
4	chr13:76112187-76112237	LNCaP	prostate:	n/a
5	chr13:76111107-76111157	Hepatocyte	liver:	n/a
6	chr13:76111980-76112030	HCF	heart:	n/a
7	chr13:76111918-76111968	MCF-7	breast:	n/a
8	chr13:76111785-76111835	MCF10A-Er-Src	breast:	n/a
9	chr13:76112232-76112282	Jurkat	blood:	n/a
10	chr13:76112274-76112324	MCF-7	breast:	n/a
11	chr13:76112187-76112237	RPTEC	kidney:	n/a
12	chr13:76111918-76111968	GM12892	blood:	n/a
13	chr13:76111751-76111801	T-47D	breast:	n/a
14	chr13:76112232-76112282	SK-N-MC	brain:	n/a
15	chr13:76111107-76111157	AG10803	skin:	n/a
16	chr13:76109220-76109270	HRE	kidney:	n/a
17	chr13:76112039-76112089	AG10803	skin:	n/a
18	chr13:76112187-76112237	HUVEC	blood vessel:	n/a
19	chr13:76112030-76112080	AG04449	skin:	fetal
20	chr13:76111785-76111835	NB4	blood:	n/a
21	chr13:76111107-76111157	HRE	kidney:	n/a
22	chr13:76111918-76111968	PFSK-1	brain:	n/a
23	chr13:76112232-76112282	AoSMC	blood vessel:	n/a
24	chr13:76112980-76113030	AoSMC	blood vessel:	n/a
25	chr13:76112973-76113023	AG09319	gingival:	n/a
26	chr13:76111751-76111801	PrEC	prostate:	n/a
27	chr13:76112980-76113030	AG04449	skin:	fetal
28	chr13:76109220-76109270	MCF10A-Er-Src	breast:	n/a
29	chr13:76112274-76112324	HL-60	blood:	n/a
30	chr13:76112232-76112282	HepG2	liver:	n/a
31	chr13:76111107-76111157	GM12891	blood:	n/a
32	chr13:76112030-76112080	SK-N-MC	brain:	n/a
33	chr13:76111751-76111801	AG10803	skin:	n/a
34	chr13:76109220-76109270	HIPEpiC	eye:	n/a
35	chr13:76109220-76109270	HL-60	blood:	n/a
36	chr13:76111785-76111835	NH-A	brain:	n/a
37	chr13:76111107-76111157	HL-60	blood:	n/a
38	chr13:76112232-76112282	CMK	blood:	n/a
39	chr13:76112973-76113023	GM12891	blood:	n/a
40	chr13:76112039-76112089	PANC-1	pancreas:	n/a
41	chr13:76111107-76111157	AG04450	lung:	fetal
42	chr13:76111751-76111801	SK-N-SH_RA	brain:	n/a
43	chr13:76111918-76111968	HNPCEpiC	eye:	n/a
44	chr13:76112274-76112324	MCF10A-Er-Src	breast:	n/a
45	chr13:76111751-76111801	SKMC	muscle:	n/a
46	chr13:76111751-76111801	NT2-D1	testis:	n/a
47	chr13:76111980-76112030	AG10803	skin:	n/a
48	chr13:76111980-76112030	HRE	kidney:	n/a
49	chr13:76112187-76112237	ECC-1	luminal epithelium:	n/a
50	chr13:76111107-76111157	HCPEpiC	choroid plexus:	n/a

(count:17 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr13:76106394..76109955-chr13:76110419..76113939,6	MCF-7	breast:
2	chr13:76101122..76104303-chr13:76108576..76110569,3	K562	blood:
3	chr13:76102775..76109881-chr13:76110381..76113047,9	MCF-7	breast:
4	chr13:76111578..76112381-chrX:73511953..73512510,2	Hela-S3	cervix:
5	chr11:65339613..65340413-chr13:76111532..76112034,2	NB4	blood:
6	chr13:76055919..76057695-chr13:76110507..76112437,2	MCF-7	breast:
7	chr13:76109113..76111805-chr13:76112674..76114626,2	K562	blood:
8	chr13:76111404..76112078-chr17:26989037..26989702,2	Hela-S3	cervix:
9	chr13:76111452..76114150-chr13:76122087..76125338,6	MCF-7	breast:
10	chr1:151253613..151254502-chr13:76111700..76112352,2	Hela-S3	cervix:
11	chr13:76111859..76112746-chr13:76123326..76123936,2	MCF-7	breast:
12	chr13:76101020..76103303-chr13:76108939..76111291,2	K562	blood:
13	chr13:76109113..76111805-chr13:76112674..76114626,2	K562	blood:
14	chr13:76102775..76109881-chr13:76110381..76113047,9	MCF-7	breast:
15	chr13:76109717..76113590-chr13:76122029..76126081,5	MCF-7	breast:
16	chr13:76055248..76057886-chr13:76110224..76112780,4	MCF-7	breast:
17	chr13:76107791..76110428-chr13:76144234..76145882,2	K562	blood:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-TBC1D4-2	chr13:76111635-76111811	NONHSAT034360

No data

Variant related genes	Relation type
COMMD6	TF binding region
COMMD6	CpG island
ENSG00000230590	chromatin interactions
ENSG00000176973	chromatin interactions
ENSG00000261553	chromatin interactions
ENSG00000143373	chromatin interactions
ENSG00000188243	chromatin interactions
ENSG00000109111	chromatin interactions
ENSG00000136111	chromatin interactions
ENSG00000132581	chromatin interactions
ENSG00000232671	chromatin interactions
ENSG00000118939	chromatin interactions

Extended variants
information (count: 370 )
Associated
traits (count: 95 )

Variant overlapped rSNPs/rCNVs (count:370 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs4885308	chr13:76106493-76106494	Weak transcription Strong transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs201943534	chr13:76106676-76106677	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs186504951	chr13:76106693-76106694	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs570660375	chr13:76106695-76106696	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs563071086	chr13:76106710-76106711	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs139172655	chr13:76106732-76106733	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs539713423	chr13:76106738-76106739	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs370673562	chr13:76106742-76106743	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs191245428	chr13:76106743-76106744	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs7989520	chr13:76106765-76106766	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs184539067	chr13:76106781-76106782	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs188965745	chr13:76106782-76106783	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs556170871	chr13:76106784-76106785	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs531244567	chr13:76106793-76106794	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs558706255	chr13:76106795-76106796	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs553771082	chr13:76106811-76106812	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs571614757	chr13:76106824-76106825	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs371302957	chr13:76106914-76106915	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs538825585	chr13:76106947-76106948	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs74753346	chr13:76106953-76106954	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs193134930	chr13:76107048-76107049	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs186305089	chr13:76107055-76107056	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs10467626	chr13:76107069-76107070	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs555437787	chr13:76107074-76107075	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs573961641	chr13:76107078-76107079	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs112704511	chr13:76107097-76107098	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs556809486	chr13:76107132-76107133	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs577928559	chr13:76107159-76107160	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs9543962	chr13:76107167-76107168	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
30	rs560339004	chr13:76107191-76107192	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs571774245	chr13:76107199-76107200	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs185138036	chr13:76107215-76107216	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs560848241	chr13:76107230-76107231	Weak transcription Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
34	rs368954151	chr13:76107236-76107237	Weak transcription Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
35	rs149744882	chr13:76107258-76107259	Weak transcription Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
36	rs531334744	chr13:76107267-76107268	Weak transcription Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
37	rs112731525	chr13:76107281-76107282	Weak transcription Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
38	rs549551257	chr13:76107303-76107304	Weak transcription Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
39	rs565134817	chr13:76107309-76107310	Weak transcription Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
40	rs60356158	chr13:76107310-76107311	Weak transcription Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
41	rs199741643	chr13:76107312-76107313	Weak transcription Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
42	rs181080573	chr13:76107314-76107315	Weak transcription Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
43	rs61367474	chr13:76107320-76107321	Weak transcription Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
44	rs547585648	chr13:76107324-76107325	Weak transcription Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
45	rs184202849	chr13:76107335-76107336	Weak transcription Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
46	rs369957320	chr13:76107357-76107358	Weak transcription Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
47	rs188824370	chr13:76107364-76107365	Weak transcription Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
48	rs180870653	chr13:76107368-76107369	Weak transcription Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
49	rs538200546	chr13:76107376-76107377	Weak transcription Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
50	rs374555033	chr13:76107382-76107383	Weak transcription Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:95)

Disease	PMID	Source
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	21080181	CNVD
HIV/AIDS	22032296	CNVD
Prostate cancer	16705090	CNVD
High-proliferative meningiomas	17937814	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Cancer	20164919	CNVD
Autism	22495311	CNVD
Chordoma	21602918	CNVD
Bladder cancer	21949216	CNVD
Acute myeloid leukemia	16864856	CNVD
Burkitt''s lymphoma	18698080	CNVD
Cancer	21637783	CNVD
Medulloblastoma	21979893	CNVD
Chronic lymphocytic leukemia	21518781	CNVD
colon cancer	17210682	CNVD
Endometrial cancer	22040021	CNVD
Colorectal cancer	20709793	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Ovarian cancer	20844748	CNVD
Colorectal cancer	19359472	CNVD
Intracranial aneurysm	19064780	CNVD
Breast cancer	19287154	CNVD
Acute myeloid leukemia	18379011	CNVD
Human rectal carcinomas	16397240	CNVD
Olfactory neuroblastoma	18408657	CNVD
Multiple myeloma	17077331	CNVD
Ependymoma	16718352	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Colorectal cancer	16272173	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Breast cancer	16608533	CNVD
Neuroblastoma	18923191	CNVD
Ovarian cancer	22174824	CNVD
Breast cancer	17133270	CNVD
Myoepithelioma	18604193	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Paraganglioma	21461997	CNVD
Pheochromocytoma	21461997	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Prostate cancer	18632612	CNVD
Colorectal cancer	21586687	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Retinoblastoma	19183342	CNVD
Developmental delay	21147756	CNVD
Melanoma	18172304	CNVD
Prostate cancer	16573809	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Basal cell lymphoma	17053054	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Non-syndromic sensorineural hearing loss	18496225	CNVD
lymphocytic leukemia	21291569	CNVD
Breast cancer	21858162	CNVD
Metanephric adenoma	20802469	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Gastric cancer	17908304	CNVD
Breast cancer	17393978	CNVD
Splenic marginal zone lymphoma	18492102	CNVD
Liposarcoma	21253554	CNVD
Colorectal cancer	16774939	CNVD
Adenoid cystic carcinoma	17372589	CNVD
abnormal development	18461090	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Acute myeloid leukemia	20729466	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Congenital anomalies of the kidney and urinary tract	18316590	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Esophageal cancer	21851588	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Hirschsprung''s Disease	21712996	CNVD
Prostate cancer	21965145	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Intracranial aneurysm	16715129	CNVD
Non-small cell lung cancer	19010865	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Breast cancer	21364760	CNVD
Myelofibrosis	22110671	CNVD
Prostate cancer	22341455	CNVD

Chromatin state (count:718 , 50 per page) page: 1 2 3 4 5 6 7 ... 15

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:76093600-76109400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
2	chr13:76095600-76109200	Weak transcription	Gastric	stomach
3	chr13:76095800-76111400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr13:76096600-76107400	Weak transcription	Fetal Intestine Small	intestine
5	chr13:76096600-76110400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
6	chr13:76096600-76111400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr13:76097000-76111000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
8	chr13:76097000-76111600	Weak transcription	Spleen	Spleen
9	chr13:76097600-76107400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
10	chr13:76097800-76107200	Weak transcription	Fetal Stomach	stomach
11	chr13:76097800-76110400	Weak transcription	Brain Angular Gyrus	brain
12	chr13:76097800-76110600	Weak transcription	Fetal Brain Male	brain
13	chr13:76097800-76110600	Weak transcription	Fetal Kidney	kidney
14	chr13:76097800-76110600	Weak transcription	Psoas Muscle	Psoas
15	chr13:76097800-76111200	Weak transcription	Placenta Amnion	Placenta Amnion
16	chr13:76098000-76107600	Weak transcription	Cortex derived primary cultured neurospheres	brain
17	chr13:76098000-76110400	Weak transcription	A549	lung
18	chr13:76098000-76110400	Weak transcription	HUVEC	blood vessel
19	chr13:76098000-76110600	Weak transcription	Brain Anterior Caudate	brain
20	chr13:76098000-76110600	Weak transcription	Rectal Smooth Muscle	rectum
21	chr13:76098000-76111200	Weak transcription	Aorta	Aorta
22	chr13:76098200-76107400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
23	chr13:76098200-76107400	Weak transcription	NHLF	lung
24	chr13:76098200-76108200	Weak transcription	NHEK	skin
25	chr13:76098200-76109600	Weak transcription	Brain Germinal Matrix	brain
26	chr13:76098200-76110400	Weak transcription	Brain Inferior Temporal Lobe	brain
27	chr13:76098400-76110200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
28	chr13:76098600-76111000	Weak transcription	Colonic Mucosa	Colon
29	chr13:76098800-76110400	Weak transcription	Brain Cingulate Gyrus	brain
30	chr13:76098800-76111400	Weak transcription	Esophagus	oesophagus
31	chr13:76099200-76107400	Strong transcription	Breast Myoepithelial Primary Cells	Breast
32	chr13:76099400-76109400	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
33	chr13:76099400-76110400	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
34	chr13:76099600-76109400	Weak transcription	HSMMtube	muscle
35	chr13:76099600-76110200	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
36	chr13:76099600-76111000	Weak transcription	K562	blood
37	chr13:76100000-76107400	Weak transcription	Fetal Muscle Leg	muscle
38	chr13:76100000-76107600	Weak transcription	Fetal Muscle Trunk	muscle
39	chr13:76100000-76109000	Weak transcription	Skeletal Muscle Male	skeletal muscle
40	chr13:76100000-76109200	Weak transcription	Lung	lung
41	chr13:76100000-76109400	Weak transcription	Left Ventricle	heart
42	chr13:76100000-76109400	Weak transcription	Sigmoid Colon	Sigmoid Colon
43	chr13:76100000-76110600	Weak transcription	Rectal Mucosa Donor 31	rectum
44	chr13:76100000-76111200	Weak transcription	Ovary	ovary
45	chr13:76100200-76107400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
46	chr13:76100200-76107400	Weak transcription	Fetal Intestine Large	intestine
47	chr13:76100200-76107600	Weak transcription	Adipose Nuclei	Adipose
48	chr13:76100200-76109200	Weak transcription	Colon Smooth Muscle	Colon
49	chr13:76100200-76109200	Weak transcription	Thymus	Thymus
50	chr13:76100200-76110400	Weak transcription	Brain Substantia Nigra	brain

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links