Variant report
Variant | esv3346969 |
---|---|
Chromosome Location | chr14:20704737-20707285 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:1)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
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Variant related genes | Relation type |
---|---|
OR11H4 | TF binding region |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs73581331 | chr14:20707002-20707003 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
2 | rs544826215 | chr14:20707017-20707018 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
3 | rs141202150 | chr14:20707041-20707042 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
4 | rs182416384 | chr14:20707044-20707045 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
5 | rs114631566 | chr14:20707050-20707051 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
6 | rs560273169 | chr14:20707067-20707068 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
7 | rs76139755 | chr14:20707083-20707084 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
8 | rs150745966 | chr14:20707089-20707090 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
9 | rs564080319 | chr14:20707094-20707095 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
10 | rs12590453 | chr14:20707100-20707101 | ZNF genes & repeats | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
11 | rs569357138 | chr14:20707113-20707114 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
12 | rs549714762 | chr14:20707115-20707116 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
13 | rs112273696 | chr14:20707162-20707163 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
14 | rs80273332 | chr14:20707179-20707180 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
15 | rs528964967 | chr14:20707185-20707186 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Cancer | 20164920 | CNVD |
Esophageal cancer | 21851588 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Retinoblastoma | 21504564 | CNVD |
High-proliferative meningiomas | 17937814 | CNVD |
Thoracic aortic aneurysm | 21092924 | CNVD |
Autism | 22495311 | CNVD |
Cone-rod dystrophy | 18421352 | CNVD |
T-cell acute lymphoblastic leukemia | 20065082 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Acute lymphoblastic leukemia | 20067559 | CNVD |
Non-small cell lung cancer | 21044232 | CNVD |
Renal cell carcinoma | 19461508 | CNVD |
Cancer | 21637783 | CNVD |
Colorectal cancer | 20709793 | CNVD |
Melanoma | 18172304 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Oral cancer | 21386901 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Breast cancer | 21264507 | CNVD |
Hepatocellular carcinoma | 22174799 | CNVD |
Breast cancer | 17899364 | CNVD |
Colorectal cancer | 16774939 | CNVD |
Neuroblastoma | 19435921 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Gastrointestinal stromal cancer | 19259404 | CNVD |
Gastrointestinal stromal cancer | 17535989 | CNVD |
Monoclonal gammopathy of undetermined significance | 17077331 | CNVD |
Paraganglioma | 17535989 | CNVD |
Pulmonary chondroma | 17535989 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Alzheimer''s disease | 21482944 | CNVD |
Mental retardation | 19951919 | CNVD |
Neuroblastoma | 21899760 | CNVD |
Cutaneous T-cell lymphoma | 21881587 | CNVD |
Heart disease | 21282601 | CNVD |
Esophageal cancer | 20955586 | CNVD |
Neurodevelopmental disorder | 22521361 | CNVD |
Lung cancer | 16773561 | CNVD |
Multiple myeloma | 16616336 | CNVD |
Cancer | 17440070 | CNVD |
Breast cancer | 16272173 | CNVD |
Oral squamous cell carcinoma | 17134496 | CNVD |
Epilepsy | 20736978 | CNVD |
Mental retardation | 20736978 | CNVD |
severe speech impairment | 20736978 | CNVD |
speech impairment | 20736978 | CNVD |
Gastrointestinal stromal cancer | 16982739 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Developmental delay | 21147756 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Lung cancer | 18438408 | CNVD |
Gastrointestinal stromal cancer | 20818650 | CNVD |
Renal cell carcinoma | 21668985 | CNVD |
Breast cancer | 21364760 | CNVD |
Prostate cancer | 18632612 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Chronic myeloid leukemia | 20724749 | CNVD |
Non-syndromic sensorineural hearing loss | 15273396 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr14:20707000-20707200 | ZNF genes & repeats | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |