Variant report

Variant	esv3347797
Chromosome Location	chr11:26550681-26551024
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 49 )
Associated
traits (count: 53 )

Variant overlapped rSNPs/rCNVs (count:49 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs12805056	chr11:26550685-26550686	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs372687093	chr11:26550688-26550689	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs372597973	chr11:26550690-26550691	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs12805071	chr11:26550711-26550712	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs375042415	chr11:26550759-26550760	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs369558091	chr11:26550765-26550766	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs373719503	chr11:26550771-26550772	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs71047860	chr11:26550777-26550778	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs377243455	chr11:26550778-26550779	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs71462716	chr11:26550779-26550780	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs368726784	chr11:26550791-26550792	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs373310199	chr11:26550792-26550793	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs376066898	chr11:26550793-26550794	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs376915224	chr11:26550795-26550796	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs71462717	chr11:26550799-26550800	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs71047861	chr11:26550803-26550804	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs12805275	chr11:26550805-26550806	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs371426640	chr11:26550806-26550807	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs373623221	chr11:26550808-26550809	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs376826653	chr11:26550811-26550812	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs12805281	chr11:26550812-26550813	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs373473567	chr11:26550814-26550815	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs377336427	chr11:26550815-26550816	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs371219884	chr11:26550817-26550818	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs373356178	chr11:26550820-26550821	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs370315112	chr11:26550827-26550828	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs376471923	chr11:26550831-26550832	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs370103871	chr11:26550833-26550834	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs373816118	chr11:26550838-26550839	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs368003733	chr11:26550847-26550848	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs370625768	chr11:26550848-26550849	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs374798777	chr11:26550852-26550853	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs368223767	chr11:26550865-26550866	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs372467962	chr11:26550868-26550869	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs201300687	chr11:26550872-26550873	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs193197110	chr11:26550888-26550889	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs377184535	chr11:26550903-26550904	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs375261583	chr11:26550909-26550910	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs368621329	chr11:26550919-26550920	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs59721527	chr11:26550920-26550921	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs59062278	chr11:26550927-26550928	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs371546721	chr11:26550934-26550935	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs375089375	chr11:26550937-26550938	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs369417273	chr11:26550950-26550951	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs578007431	chr11:26550954-26550955	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs372742910	chr11:26550963-26550964	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs61244953	chr11:26550974-26550975	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs566315265	chr11:26550989-26550990	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs571514420	chr11:26550998-26550999	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:53)

Disease	PMID	Source
Burkitt''s lymphoma	19759907	CNVD
Breast cancer	17603634	CNVD
Medulloblastoma	21979893	CNVD
Thyroid cancer	19087340	CNVD
Melanoma	18172304	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Wilms tumour	21544195	CNVD
Parathyroid adenoma	22454399	CNVD
Chordoma	21602918	CNVD
Breast cancer	21949216	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	19222835	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Beckwith-Wiedemann syndrome	21518781	CNVD
Wilms tumour	21518781	CNVD
Hepatoblastoma	21518781	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Gastric cancer	17908304	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Multiple myeloma	20724749	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Autism	22495311	CNVD
Prostate cancer	18632612	CNVD
Lung cancer	18438408	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Non-small cell lung cancer	21385341	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	21785460	CNVD
Medulloblastoma	16783165	CNVD
small cell lung cancer	20016488	CNVD
Congenital diaphragmatic hernia	21525063	CNVD
Renal cell carcinoma	18194544	CNVD
Potocki-Shaffer syndrome	19222835	CNVD
WAGR syndrome	19222835	CNVD
Chordoma	18071362	CNVD
Autism	22102821	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Breast cancer	21364760	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Neuroticism	17667963	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:26506400-26564600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links