Variant report
Variant | esv3349779 |
---|---|
Chromosome Location | chr5:17491735-17620964 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:1639)
- CpG islands (count:672)
- Chromatin interactive region (count:2)
- LncRNA region (count:2)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr5:17517830-17517852 | K562 | blood: | n/a | n/a |
2 | ARID3A | chr5:17526839-17526866 | K562 | blood: | n/a | n/a |
3 | ATF1 | chr5:17492224-17492379 | K562 | blood: | n/a | n/a |
4 | ATF1 | chr5:17517811-17517870 | K562 | blood: | n/a | n/a |
5 | ATF3 | chr5:17517759-17517894 | K562 | blood: | n/a | n/a |
6 | BACH1 | chr5:17526845-17526876 | K562 | blood: | n/a | n/a |
7 | BATF | chr5:17580902-17581080 | GM12878 | blood: | n/a | n/a |
8 | BATF | chr5:17586875-17587277 | GM12878 | blood: | n/a | n/a |
9 | BATF | chr5:17520861-17521352 | GM12878 | blood: | n/a | n/a |
10 | BATF | chr5:17588369-17588646 | GM12878 | blood: | n/a | n/a |
11 | BATF | chr5:17527729-17528285 | GM12878 | blood: | n/a | n/a |
12 | BATF | chr5:17524295-17524851 | GM12878 | blood: | n/a | n/a |
13 | BATF | chr5:17588661-17591031 | GM12878 | blood: | n/a | n/a |
14 | BATF | chr5:17581407-17582352 | GM12878 | blood: | n/a | n/a |
15 | BATF | chr5:17581115-17581413 | GM12878 | blood: | n/a | n/a |
16 | BATF | chr5:17528689-17530680 | GM12878 | blood: | n/a | n/a |
17 | BATF | chr5:17581121-17581401 | GM12878 | blood: | n/a | n/a |
18 | BATF | chr5:17583462-17585828 | GM12878 | blood: | n/a | n/a |
19 | BATF | chr5:17586894-17587691 | GM12878 | blood: | n/a | n/a |
20 | BATF | chr5:17595530-17597898 | GM12878 | blood: | n/a | n/a |
21 | BATF | chr5:17528684-17530686 | GM12878 | blood: | n/a | n/a |
22 | BATF | chr5:17525255-17528049 | GM12878 | blood: | n/a | n/a |
23 | BATF | chr5:17521821-17524301 | GM12878 | blood: | n/a | n/a |
24 | BATF | chr5:17591806-17592083 | GM12878 | blood: | n/a | n/a |
25 | BATF | chr5:17587321-17587686 | GM12878 | blood: | n/a | n/a |
26 | BATF | chr5:17595225-17595440 | GM12878 | blood: | n/a | n/a |
27 | BATF | chr5:17583170-17583447 | GM12878 | blood: | n/a | n/a |
28 | BATF | chr5:17588662-17591030 | GM12878 | blood: | n/a | n/a |
29 | BATF | chr5:17599128-17599665 | GM12878 | blood: | n/a | n/a |
30 | BATF | chr5:17524307-17524569 | GM12878 | blood: | n/a | n/a |
31 | BATF | chr5:17581436-17582365 | GM12878 | blood: | n/a | n/a |
32 | BATF | chr5:17592098-17594464 | GM12878 | blood: | n/a | n/a |
33 | BATF | chr5:17518387-17521181 | GM12878 | blood: | n/a | n/a |
34 | BATF | chr5:17586589-17586869 | GM12878 | blood: | n/a | n/a |
35 | BATF | chr5:17595045-17595501 | GM12878 | blood: | n/a | n/a |
36 | BATF | chr5:17518382-17520848 | GM12878 | blood: | n/a | n/a |
37 | BATF | chr5:17588377-17588634 | GM12878 | blood: | n/a | n/a |
38 | BATF | chr5:17521816-17524282 | GM12878 | blood: | n/a | n/a |
39 | BATF | chr5:17525250-17527716 | GM12878 | blood: | n/a | n/a |
40 | BATF | chr5:17499625-17499833 | GM12878 | blood: | n/a | n/a |
41 | BATF | chr5:17591814-17594470 | GM12878 | blood: | n/a | n/a |
42 | BATF | chr5:17599390-17599669 | GM12878 | blood: | n/a | n/a |
43 | BATF | chr5:17583178-17585829 | GM12878 | blood: | n/a | n/a |
44 | BATF | chr5:17586583-17586881 | GM12878 | blood: | n/a | n/a |
45 | BATF | chr5:17595471-17597904 | GM12878 | blood: | n/a | n/a |
46 | BCL11A | chr5:17528686-17530695 | GM12878 | blood: | n/a | n/a |
47 | BCL11A | chr5:17580920-17582358 | GM12878 | blood: | n/a | n/a |
48 | BCL11A | chr5:17499619-17499851 | GM12878 | blood: | n/a | n/a |
49 | BCL11A | chr5:17595036-17597994 | GM12878 | blood: | n/a | n/a |
50 | BCL11A | chr5:17517610-17517929 | GM12878 | blood: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr5:17522582-17522632 | ECC-1 | luminal epithelium: | n/a |
2 | chr5:17522582-17522632 | ECC-1 | luminal epithelium: | n/a |
3 | chr5:17517201-17517251 | Hepatocyte | liver: | n/a |
4 | chr5:17522582-17522632 | HNPCEpiC | eye: | n/a |
5 | chr5:17491941-17491991 | GM06990 | blood: | n/a |
6 | chr5:17519013-17519063 | HUVEC | blood vessel: | n/a |
7 | chr5:17595441-17595491 | MCF10A-Er-Src | breast: | n/a |
8 | chr5:17595441-17595491 | U87 | brain: | n/a |
9 | chr5:17528991-17529041 | NHBE | bronchial: | n/a |
10 | chr5:17580826-17580876 | Hela-S3 | cervix: | n/a |
11 | chr5:17519013-17519063 | AG09309 | skin: | n/a |
12 | chr5:17580826-17580876 | ProgFib | skin: | n/a |
13 | chr5:17495781-17495831 | NT2-D1 | testis: | n/a |
14 | chr5:17604867-17604917 | HEK293 | kidney: | embryo |
15 | chr5:17527430-17527480 | BJ | skin: | n/a |
16 | chr5:17527430-17527480 | H1-hESC | embryonic stem cell: | embryo |
17 | chr5:17495781-17495831 | AG10803 | skin: | n/a |
18 | chr5:17527430-17527480 | AG09319 | gingival: | n/a |
19 | chr5:17519013-17519063 | GM06990 | blood: | n/a |
20 | chr5:17528991-17529041 | HMEC | breast: | n/a |
21 | chr5:17528991-17529041 | GM12892 | blood: | n/a |
22 | chr5:17580826-17580876 | AG04450 | lung: | fetal |
23 | chr5:17522582-17522632 | Jurkat | blood: | n/a |
24 | chr5:17524561-17524611 | Jurkat | blood: | n/a |
25 | chr5:17580826-17580876 | CMK | blood: | n/a |
26 | chr5:17595441-17595491 | Jurkat | blood: | n/a |
27 | chr5:17495781-17495831 | A549 | lung: | n/a |
28 | chr5:17517201-17517251 | SK-N-SH | brain: | n/a |
29 | chr5:17604867-17604917 | HCM | heart: | n/a |
30 | chr5:17595441-17595491 | LNCaP | prostate: | n/a |
31 | chr5:17522582-17522632 | Caco-2 | colon: | n/a |
32 | chr5:17491941-17491991 | HUVEC | blood vessel: | n/a |
33 | chr5:17524561-17524611 | HUVEC | blood vessel: | n/a |
34 | chr5:17604867-17604917 | BE2_C | brain: | n/a |
35 | chr5:17595441-17595491 | HCPEpiC | choroid plexus: | n/a |
36 | chr5:17519013-17519063 | MCF-7 | breast: | n/a |
37 | chr5:17491941-17491991 | BJ | skin: | n/a |
38 | chr5:17595441-17595491 | GM12892 | blood: | n/a |
39 | chr5:17524561-17524611 | Hepatocyte | liver: | n/a |
40 | chr5:17527430-17527480 | NB4 | blood: | n/a |
41 | chr5:17495781-17495831 | K562 | blood: | n/a |
42 | chr5:17580826-17580876 | HCPEpiC | choroid plexus: | n/a |
43 | chr5:17522582-17522632 | IMR90 | lung: | fetal |
44 | chr5:17580826-17580876 | GM19239 | blood: | n/a |
45 | chr5:17595441-17595491 | HPAEpiC | pulmonary alveolar: | n/a |
46 | chr5:17517201-17517251 | NT2-D1 | testis: | n/a |
47 | chr5:17524561-17524611 | HNPCEpiC | eye: | n/a |
48 | chr5:17580826-17580876 | HRCEpiC | kidney: | n/a |
49 | chr5:17595441-17595491 | SK-N-SH | brain: | n/a |
50 | chr5:17491941-17491991 | GM19239 | blood: | n/a |
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No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-BASP1-11 | chr5:17494578-17494846 | l_2885_chr5:17456969-17494846_brain |
2 | lnc-MYO10-12 | chr5:17587399-17587632 | NONHSAT100653 |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000249427 | TF binding region |
ENSG00000249282 | TF binding region |
ENSG00000248861 | TF binding region |
ENSG00000250558 | TF binding region |
ENSG00000248205 | TF binding region |
ENSG00000250807 | TF binding region |
ENSG00000250667 | TF binding region |
ENSG00000250296 | TF binding region |
ENSG00000250055 | TF binding region |
ENSG00000248422 | TF binding region |
ENSG00000249339 | TF binding region |
ENSG00000271296 | TF binding region |
ENSG00000249329 | TF binding region |
ENSG00000249357 | TF binding region |
ENSG00000249156 | TF binding region |
ENSG00000250088 | TF binding region |
ENSG00000268799 | TF binding region |
ENSG00000185041 | TF binding region |
ENSG00000249620 | TF binding region |
ENSG00000249427 | CpG island |
ENSG00000249282 | CpG island |
ENSG00000248861 | CpG island |
ENSG00000250558 | CpG island |
ENSG00000248205 | CpG island |
ENSG00000250807 | CpG island |
ENSG00000250667 | CpG island |
ENSG00000250296 | CpG island |
ENSG00000250055 | CpG island |
ENSG00000248422 | CpG island |
ENSG00000249339 | CpG island |
ENSG00000271296 | CpG island |
ENSG00000249329 | CpG island |
ENSG00000249357 | CpG island |
ENSG00000249156 | CpG island |
ENSG00000250088 | CpG island |
ENSG00000268799 | CpG island |
ENSG00000185041 | CpG island |
ENSG00000249620 | CpG island |
ENSG00000268799 | chromatin interactions |
ENSG00000250667 | chromatin interactions |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs573804624 | chr5:17491773-17491774 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
2 | rs542798613 | chr5:17491778-17491779 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
3 | rs545722944 | chr5:17491787-17491788 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
4 | rs559510396 | chr5:17491799-17491800 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
5 | rs528370671 | chr5:17491803-17491804 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
6 | rs61745031 | chr5:17491829-17491830 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
7 | rs551680206 | chr5:17491845-17491846 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
8 | rs565116758 | chr5:17491860-17491861 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
9 | rs569451426 | chr5:17491863-17491864 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
10 | rs530776816 | chr5:17491867-17491868 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
11 | rs377256071 | chr5:17491871-17491872 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
12 | rs550583327 | chr5:17491876-17491877 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
13 | rs200861628 | chr5:17491953-17491954 | Inactive region | CpG islandChromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
14 | rs564399944 | chr5:17491955-17491956 | Inactive region | CpG islandChromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
15 | rs567375861 | chr5:17491968-17491969 | Inactive region | CpG islandChromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
16 | rs536354777 | chr5:17491970-17491971 | Inactive region | CpG islandChromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
17 | rs546867764 | chr5:17491987-17491988 | Inactive region | CpG islandChromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
18 | rs191906398 | chr5:17492006-17492007 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
19 | rs538943034 | chr5:17492034-17492035 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
20 | rs73756920 | chr5:17492077-17492078 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
21 | rs143192095 | chr5:17492109-17492110 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
22 | rs576023733 | chr5:17492127-17492128 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
23 | rs537018525 | chr5:17492130-17492131 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
24 | rs557001837 | chr5:17492131-17492132 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
25 | rs573739552 | chr5:17492146-17492147 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
26 | rs542788437 | chr5:17492151-17492152 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
27 | rs187590039 | chr5:17492154-17492155 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
28 | rs573024363 | chr5:17492166-17492167 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
29 | rs544889268 | chr5:17492205-17492206 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
30 | rs35465459 | chr5:17492230-17492231 | Inactive region | TF binding regionChromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
31 | rs192998784 | chr5:17492238-17492239 | Inactive region | TF binding regionChromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
32 | rs543152393 | chr5:17492256-17492257 | Inactive region | TF binding regionChromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
33 | rs550519971 | chr5:17492297-17492298 | Inactive region | TF binding regionChromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
34 | rs150858139 | chr5:17492362-17492363 | Inactive region | TF binding regionChromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
35 | rs139302730 | chr5:17492371-17492372 | Inactive region | TF binding regionChromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
36 | rs533583910 | chr5:17492398-17492399 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
37 | rs149565860 | chr5:17492442-17492443 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
38 | rs566936487 | chr5:17492499-17492500 | Inactive region | TF binding regionChromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
39 | rs182567372 | chr5:17492506-17492507 | Inactive region | TF binding regionChromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
40 | rs369906519 | chr5:17492512-17492513 | Inactive region | TF binding regionChromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
41 | rs186838538 | chr5:17492535-17492536 | Inactive region | TF binding regionChromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
42 | rs530819971 | chr5:17492548-17492549 | Inactive region | TF binding regionChromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
43 | rs375338254 | chr5:17492570-17492571 | Inactive region | TF binding regionChromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
44 | rs2457755 | chr5:17492589-17492590 | Inactive region | TF binding regionChromatin interactive region | 2 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
45 | rs73756921 | chr5:17492591-17492592 | Inactive region | TF binding regionChromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
46 | rs192185881 | chr5:17492607-17492608 | Inactive region | TF binding regionChromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
47 | rs556989256 | chr5:17492651-17492652 | Inactive region | TF binding regionChromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
48 | rs573705381 | chr5:17492665-17492666 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
49 | rs371177449 | chr5:17492674-17492675 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
50 | rs184223349 | chr5:17492716-17492717 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Lung cancer | 19547694 | CNVD |
Cri-du chat syndrome | 22283845 | CNVD |
Disorders of sex development | 21048976 | CNVD |
Non-small cell lung cancer | 20864512 | CNVD |
Cancer | 21183584 | CNVD |
Cervical squamous cell carcinoma | 21590768 | CNVD |
Honadal dysgenesis | 21048976 | CNVD |
Cancer | 16751803 | CNVD |
Breast cancer | 17133270 | CNVD |
Hepatocellular carcinoma | 22174799 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Salivary gland tumor | 18059337 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
Kartagener syndrome | 16639409 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Myofibroblastic sarcoma | 19369631 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Medulloblastoma | 16783165 | CNVD |
Thyroid cancer | 19087340 | CNVD |
Liposarcoma | 21253554 | CNVD |
Pancreatic endocrine tumor | 17639061 | CNVD |
Cervical Cancer | 21857958 | CNVD |
Cervical cancer | 21062161 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Glioblastoma multiforme | 19960244 | CNVD |
Oral cancer | 21386901 | CNVD |
Astrocytoma | 17387387 | CNVD |
Breast cancer | 21264507 | CNVD |
Acute lymphoblastic leukemia | 20067559 | CNVD |
Esophageal squamous carcinoma | 18350619 | CNVD |
Ewing''s sarcoma | 17952124 | CNVD |
Malignant mesothelioma | 18160781 | CNVD |
Pleural malignant mesothelioma | 18160781 | CNVD |
Cervical cancer | 18559093 | CNVD |
Basal cell lymphoma | 16317097 | CNVD |
Diffuse large b-cell lymphoma | 16317097 | CNVD |
Metanephric adenoma | 20802469 | CNVD |
Acute lymphoblastic leukemia | 17690704 | CNVD |
Gastrointestinal stromal cancer | 16982739 | CNVD |
Phyllodes tumor | 17334353 | CNVD |
Malaria | 21533027 | CNVD |
Renal cell carcinoma | 19461508 | CNVD |
Colorectal cancer | 21645411 | CNVD |
Gastric cancer | 22152101 | CNVD |
Oesophago-gastric ulcer | 22152101 | CNVD |
Ovarian cancer | 21781307 | CNVD |
Breast cancer | 20668451 | CNVD |
Cancer | 20668451 | CNVD |
Lung cancer | 20668451 | CNVD |
Ovarian cancer | 20668451 | CNVD |
Pancreas cancer | 20668451 | CNVD |
Prostate cancer | 20668451 | CNVD |
Cancer | 20164919 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Thoracic aortic aneurysm | 21092924 | CNVD |
Multiple myeloma | 17550852 | CNVD |
prenatal diagnosis | 22389664 | CNVD |
Bladder cancer | 21909424 | CNVD |
DNA damage stimulus | 22844521 | CNVD |
DNA repair | 22844521 | CNVD |
Breast cancer | 21785460 | CNVD |
Spinal muscular atrophy | 22422766 | CNVD |
Spinal muscular atrophy | 22558076 | CNVD |
Spinal muscular atrophy | 21320981 | CNVD |
Spinal muscular atrophy | 21762474 | CNVD |
Breast cancer | 21858162 | CNVD |
Esophageal adenocarcinoma | 19417022 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Lung cancer | 18438408 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Breast cancer | 16608533 | CNVD |
Anaplastic large cell lymphoma | 18179710 | CNVD |
Autism | 22495311 | CNVD |
Melanoma | 18172304 | CNVD |
Non-syndromic sensorineural hearing loss | 20606397 | CNVD |
Intellectual disability | 22102821 | CNVD |
Ovarian clear cell carcinoma | 19293255 | CNVD |
Williams Syndrome | 20824207 | CNVD |
Breast cancer | 21364760 | CNVD |
Primary mediastinal b-cell lymphoma | 17728785 | CNVD |
Acute lymphoblastic leukemia | 17640729 | CNVD |
Myoepithelioma | 18604193 | CNVD |
Lung cancer | 16740712 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Glioblastoma multiforme | 22286061 | CNVD |
Melanoma | 22183965 | CNVD |
Renal cell carcinoma | 18194544 | CNVD |
Prostate cancer | 21965145 | CNVD |
Ovarian cancer | 20844748 | CNVD |
Myeloproliferative neoplasm | 20015882 | CNVD |
Breast cancer | 17603634 | CNVD |
Non-syndromic sensorineural hearing loss | 17122850 | CNVD |
Autism | 19287141 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
early-passage human iPS cells | 21368824 | CNVD |
Breast cancer | 22522925 | CNVD |
Non-syndromic sensorineural hearing loss | 18451855 | CNVD |
Acute lymphoblastic leukemia | 22237106 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr5:17494400-17496200 | Enhancers | Primary neutrophils fromperipheralblood | blood |
2 | chr5:17500600-17500800 | Enhancers | A549 | lung |
3 | chr5:17500600-17500800 | Enhancers | Hela-S3 | cervix |
4 | chr5:17500600-17501000 | Active TSS | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
5 | chr5:17500600-17501000 | Active TSS | NHDF-Ad | bronchial |
6 | chr5:17502200-17503000 | Enhancers | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
7 | chr5:17509000-17509400 | Enhancers | Fetal Brain Male | brain |
8 | chr5:17512000-17512200 | Enhancers | iPS DF 19.11 Cell Line | embryonic stem cell |
9 | chr5:17512200-17512400 | Enhancers | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
10 | chr5:17512200-17512400 | Flanking Active TSS | iPS DF 19.11 Cell Line | embryonic stem cell |
11 | chr5:17512400-17512600 | Active TSS | iPS DF 19.11 Cell Line | embryonic stem cell |
12 | chr5:17512600-17517600 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
13 | chr5:17512600-17519400 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
14 | chr5:17513600-17514600 | Enhancers | A549 | lung |
15 | chr5:17517400-17517600 | Enhancers | H1 Derived Mesenchymal Stem Cells | ES cell derived |
16 | chr5:17517600-17518000 | ZNF genes & repeats | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
17 | chr5:17517600-17518000 | Flanking Active TSS | H1 Derived Mesenchymal Stem Cells | ES cell derived |
18 | chr5:17517800-17518000 | ZNF genes & repeats | Duodenum Mucosa | Duodenum |
19 | chr5:17517800-17518000 | Flanking Bivalent TSS/Enh | Lung | lung |
20 | chr5:17517800-17518000 | Flanking Bivalent TSS/Enh | Right Ventricle | heart |
21 | chr5:17517800-17518000 | Bivalent/Poised TSS | Small Intestine | intestine |
22 | chr5:17517800-17518000 | Bivalent/Poised TSS | Hela-S3 | cervix |
23 | chr5:17526600-17527000 | Bivalent Enhancer | H9 Cell Line | embryonic stem cell |
24 | chr5:17526600-17527000 | Enhancers | iPS DF 6.9 Cell Line | embryonic stem cell |
25 | chr5:17526600-17527000 | Active TSS | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
26 | chr5:17526600-17527000 | ZNF genes & repeats | Brain Substantia Nigra | brain |
27 | chr5:17526800-17527000 | Bivalent Enhancer | Small Intestine | intestine |
28 | chr5:17593600-17598800 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
29 | chr5:17604200-17604600 | Enhancers | Lung | lung |
30 | chr5:17604200-17604600 | Enhancers | Hela-S3 | cervix |
31 | chr5:17607400-17607600 | Enhancers | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
32 | chr5:17616600-17616800 | ZNF genes & repeats | Brain Hippocampus Middle | brain |
33 | chr5:17619200-17620600 | Enhancers | Hela-S3 | cervix |
34 | chr5:17620600-17621000 | Enhancers | iPS DF 19.11 Cell Line | embryonic stem cell |