Variant report

Variant	esv3350484
Chromosome Location	chr6:56707493-56709741
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:562)
CpG islands
(count:489)
Chromatin interactive
region (count:3)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:562 , 50 per page) page: 1 2 3 4 5 6 7 ... 12

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:56708934-56709196	HepG2	liver:	n/a	n/a
2	ATF2	chr6:56708708-56709068	H1-hESC	embryonic stem cell:	n/a	n/a
3	ATF2	chr6:56708646-56708986	H1-hESC	embryonic stem cell:	n/a	n/a
4	BACH1	chr6:56708791-56709079	H1-hESC	embryonic stem cell:	n/a	n/a
5	BCLAF1	chr6:56707719-56708511	GM12878	blood:	n/a	chr6:56708458-56708467 chr6:56708379-56708392 chr6:56708089-56708102 chr6:56708382-56708395 chr6:56708228-56708241 chr6:56708456-56708469
6	BCLAF1	chr6:56708778-56709347	GM12878	blood:	n/a	chr6:56709156-56709169
7	BHLHE40	chr6:56708961-56708992	K562	blood:	n/a	n/a
8	BHLHE40	chr6:56708241-56708390	HepG2	liver:	n/a	chr6:56708373-56708389
9	BHLHE40	chr6:56708820-56709300	GM12878	blood:	n/a	chr6:56709016-56709032
10	BRCA1	chr6:56707729-56707792	GM12878	blood:	n/a	n/a
11	BRCA1	chr6:56708849-56709196	GM12878	blood:	n/a	n/a
12	BRCA1	chr6:56708978-56709235	Hela-S3	cervix:	n/a	n/a
13	CEBPB	chr6:56708977-56709238	Hela-S3	cervix:	n/a	n/a
14	CEBPB	chr6:56707559-56707652	H1-hESC	embryonic stem cell:	n/a	n/a
15	CEBPB	chr6:56707938-56708043	H1-hESC	embryonic stem cell:	n/a	n/a
16	CHD1	chr6:56707606-56708307	GM12878	blood:	n/a	n/a
17	CHD1	chr6:56704985-56709414	IMR90	lung:	n/a	n/a
18	CHD1	chr6:56707490-56708200	H1-hESC	embryonic stem cell:	n/a	n/a
19	CHD1	chr6:56708735-56709122	GM12878	blood:	n/a	n/a
20	CHD2	chr6:56707824-56708000	HepG2	liver:	n/a	n/a
21	CHD2	chr6:56708908-56709257	Hela-S3	cervix:	n/a	n/a
22	CHD2	chr6:56708689-56709212	H1-hESC	embryonic stem cell:	n/a	n/a
23	CHD2	chr6:56708743-56709199	GM12878	blood:	n/a	n/a
24	CREB1	chr6:56708546-56709254	H1-hESC	embryonic stem cell:	n/a	n/a
25	CTBP2	chr6:56708716-56709387	H1-hESC	embryonic stem cell:	n/a	n/a
26	CTBP2	chr6:56707682-56708501	H1-hESC	embryonic stem cell:	n/a	n/a
27	CTCF	chr6:56709000-56709150	NB4	blood:	n/a	n/a
28	CTCF	chr6:56709020-56709170	HA-sp	spinal cord:	n/a	n/a
29	CTCF	chr6:56708863-56709396	MCF-7	breast:	n/a	n/a
30	CTCF	chr6:56709040-56709190	GM12872	blood:	n/a	n/a
31	CTCF	chr6:56707980-56708130	HepG2	liver:	n/a	n/a
32	CTCF	chr6:56709040-56709190	HFF-Myc	foreskin:	n/a	n/a
33	CTCF	chr6:56707980-56708130	GM12871	blood:	n/a	n/a
34	CTCF	chr6:56709060-56709210	HCT-116	colon:	n/a	n/a
35	CTCF	chr6:56709080-56709230	AG04450	lung:	n/a	n/a
36	CTCF	chr6:56709020-56709170	GM12874	blood:	n/a	n/a
37	CTCF	chr6:56709060-56709210	HMF	breast:	n/a	n/a
38	CTCF	chr6:56709120-56709270	GM12801	blood:	n/a	n/a
39	CTCF	chr6:56709060-56709210	HFF-Myc	foreskin:	n/a	n/a
40	CTCF	chr6:56708879-56709262	A549	lung:	n/a	n/a
41	CTCF	chr6:56709020-56709170	HAc	cerebellar:	n/a	n/a
42	CTCF	chr6:56709080-56709230	HMF	breast:	n/a	n/a
43	CTCF	chr6:56708993-56709251	Pancreas_OC	pancreas:	n/a	n/a
44	CTCF	chr6:56709060-56709210	HRPEpiC	eye:	n/a	n/a
45	CTCF	chr6:56709040-56709190	GM12865	blood:	n/a	n/a
46	CTCF	chr6:56709040-56709190	HUVEC	blood vessel:	n/a	n/a
47	CTCF	chr6:56709061-56709197	Kidney_OC	kidney:	n/a	n/a
48	CTCF	chr6:56709080-56709230	Hela-S3	cervix:	n/a	n/a
49	CTCF	chr6:56708997-56709005	GM20000	blood:	n/a	n/a
50	CTCF	chr6:56709080-56709230	GM12872	blood:	n/a	n/a

(count:489 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:56709031-56709081	U87	brain:	n/a
2	chr6:56709031-56709081	U87	brain:	n/a
3	chr6:56708763-56708813	K562	blood:	n/a
4	chr6:56708725-56708775	HCPEpiC	choroid plexus:	n/a
5	chr6:56708763-56708813	HCM	heart:	n/a
6	chr6:56707687-56707737	Hela-S3	cervix:	n/a
7	chr6:56708250-56708300	Caco-2	colon:	n/a
8	chr6:56708250-56708300	ovcar-3	ovarian:	n/a
9	chr6:56708763-56708813	SAEC	small airway:	n/a
10	chr6:56708763-56708813	PrEC	prostate:	n/a
11	chr6:56708250-56708300	MCF10A-Er-Src	breast:	n/a
12	chr6:56709141-56709191	SK-N-SH_RA	brain:	n/a
13	chr6:56707687-56707737	NB4	blood:	n/a
14	chr6:56707687-56707737	HUVEC	blood vessel:	n/a
15	chr6:56707687-56707737	ECC-1	luminal epithelium:	n/a
16	chr6:56708250-56708300	HCM	heart:	n/a
17	chr6:56707687-56707737	AoSMC	blood vessel:	n/a
18	chr6:56708174-56708224	U87	brain:	n/a
19	chr6:56708725-56708775	HIPEpiC	eye:	n/a
20	chr6:56708174-56708224	AG04450	lung:	fetal
21	chr6:56709141-56709191	AG04450	lung:	fetal
22	chr6:56708725-56708775	HL-60	blood:	n/a
23	chr6:56708725-56708775	AG09309	skin:	n/a
24	chr6:56709141-56709191	ovcar-3	ovarian:	n/a
25	chr6:56709031-56709081	HepG2	liver:	n/a
26	chr6:56709328-56709378	HCPEpiC	choroid plexus:	n/a
27	chr6:56708763-56708813	NHDF-neo	bronchial:	n/a
28	chr6:56708174-56708224	AG10803	skin:	n/a
29	chr6:56709328-56709378	MCF10A-Er-Src	breast:	n/a
30	chr6:56709141-56709191	GM06990	blood:	n/a
31	chr6:56709141-56709191	LNCaP	prostate:	n/a
32	chr6:56709328-56709378	HCT-116	colon:	n/a
33	chr6:56709328-56709378	GM12892	blood:	n/a
34	chr6:56707687-56707737	HEK293	kidney:	embryo
35	chr6:56708725-56708775	HRE	kidney:	n/a
36	chr6:56709031-56709081	HRE	kidney:	n/a
37	chr6:56708763-56708813	SK-N-MC	brain:	n/a
38	chr6:56709328-56709378	HRPEpiC	eye:	n/a
39	chr6:56708250-56708300	LNCaP	prostate:	n/a
40	chr6:56708250-56708300	NHDF-neo	bronchial:	n/a
41	chr6:56707687-56707737	GM19239	blood:	n/a
42	chr6:56708725-56708775	MCF10A-Er-Src	breast:	n/a
43	chr6:56708174-56708224	RPTEC	kidney:	n/a
44	chr6:56708174-56708224	SAEC	small airway:	n/a
45	chr6:56708763-56708813	Hela-S3	cervix:	n/a
46	chr6:56708763-56708813	PANC-1	pancreas:	n/a
47	chr6:56708174-56708224	GM12891	blood:	n/a
48	chr6:56708763-56708813	HEK293	kidney:	embryo
49	chr6:56709031-56709081	H1-hESC	embryonic stem cell:	embryo
50	chr6:56709141-56709191	NT2-D1	testis:	n/a

(count:3 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr6:56707257..56710686-chr6:56712186..56717279,8	MCF-7	breast:
2	chr6:56632783..56633359-chr6:56708968..56709676,2	MCF-7	breast:
3	chr6:56704167..56710132-chr6:56712428..56720773,11	MCF-7	breast:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-BEND6-1	chr6:56708800-56708864	ENSG00000231441.1

No data

Variant related genes	Relation type
ENSG00000231441	TF binding region
DST	TF binding region
ENSG00000231441	CpG island
DST	CpG island
ENSG00000151914	chromatin interactions

Extended variants
information (count: 93 )
Associated
traits (count: 82 )

Variant overlapped rSNPs/rCNVs (count:93 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs78531133	chr6:56707503-56707504	Active TSS Flanking Active TSS Bivalent Enhancer Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
2	rs142623606	chr6:56707532-56707533	Active TSS Flanking Active TSS Bivalent Enhancer Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs536506169	chr6:56707556-56707557	Active TSS Flanking Active TSS Bivalent Enhancer Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs79725238	chr6:56707624-56707625	Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
5	rs576002374	chr6:56707627-56707628	Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs543442189	chr6:56707636-56707637	Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs186245051	chr6:56707683-56707684	Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
8	rs576969842	chr6:56707695-56707696	Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs13192931	chr6:56707719-56707720	Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
10	rs191194101	chr6:56707746-56707747	Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
11	rs370243574	chr6:56707776-56707777	Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
12	rs575376411	chr6:56707779-56707780	Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
13	rs530244190	chr6:56707780-56707781	Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
14	rs373587937	chr6:56707795-56707796	Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs116264433	chr6:56707841-56707842	Active TSS Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
16	rs376865259	chr6:56707855-56707856	Active TSS Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs563854688	chr6:56707862-56707863	Active TSS Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
18	rs370240543	chr6:56707869-56707870	Active TSS Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
19	rs373194279	chr6:56707925-56707926	Active TSS Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
20	rs182517599	chr6:56707946-56707947	Active TSS Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
21	rs370536657	chr6:56707962-56707963	Active TSS Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
22	rs374176677	chr6:56707965-56707966	Active TSS Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
23	rs571363006	chr6:56707974-56707975	Active TSS Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
24	rs368391962	chr6:56707979-56707980	Active TSS Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
25	rs371362925	chr6:56707987-56707988	Active TSS Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
26	rs547186256	chr6:56708003-56708004	Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
27	rs565833440	chr6:56708013-56708014	Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
28	rs536082013	chr6:56708037-56708038	Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
29	rs554830264	chr6:56708051-56708052	Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
30	rs569652305	chr6:56708063-56708064	Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
31	rs79944930	chr6:56708071-56708072	Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
32	rs558474878	chr6:56708083-56708084	Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
33	rs576834962	chr6:56708107-56708108	Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
34	rs541478620	chr6:56708135-56708136	Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
35	rs112522467	chr6:56708180-56708181	Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
36	rs553209822	chr6:56708181-56708182	Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
37	rs574954264	chr6:56708213-56708214	Active TSS Bivalent Enhancer Flanking Active TSS Enhancers Bivalent/Poised TSS Weak transcription	TF binding region CpG island Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
38	rs542091792	chr6:56708283-56708284	Active TSS Bivalent Enhancer Flanking Active TSS Enhancers Bivalent/Poised TSS Weak transcription	TF binding region CpG island Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
39	rs71550518	chr6:56708365-56708366	Active TSS Bivalent Enhancer Flanking Active TSS Enhancers Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
40	rs112513617	chr6:56708367-56708368	Active TSS Bivalent Enhancer Flanking Active TSS Enhancers Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
41	rs185968827	chr6:56708510-56708511	Active TSS Bivalent Enhancer Enhancers Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
42	rs191241064	chr6:56708529-56708530	Active TSS Bivalent Enhancer Enhancers Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
43	rs183107924	chr6:56708536-56708537	Active TSS Bivalent Enhancer Enhancers Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
44	rs187523725	chr6:56708623-56708624	Active TSS Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
45	rs564829111	chr6:56708680-56708681	Active TSS Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
46	rs7766565	chr6:56708693-56708694	Active TSS Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
47	rs547444283	chr6:56708705-56708706	Active TSS Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
48	rs559213719	chr6:56708730-56708731	Active TSS Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription	TF binding region CpG island Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
49	rs529885430	chr6:56708737-56708738	Active TSS Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription	TF binding region CpG island Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
50	rs540120677	chr6:56708738-56708739	Active TSS Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription	TF binding region CpG island Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:82)

Disease	PMID	Source
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Leukemia	21518781	CNVD
Cancer	21637783	CNVD
Facial dysmorphism	22105932	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	21080181	CNVD
Hepatocellular carcinoma	22174799	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Bladder cancer	19088036	CNVD
Wilms tumour	21544195	CNVD
Uveal melanoma	21693616	CNVD
Biliary cancer	19435499	CNVD
Malaria	21533027	CNVD
Retinoblastoma	19183342	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Breast cancer	21858162	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	22495311	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Urothelial carcinoma	18382360	CNVD
Cancer	21183584	CNVD
small cell lung cancer	20016488	CNVD
Gastric cancer	17908304	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Neuroblastoma	16790693	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Osteosarcoma	16790693	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Lung cancer	18438408	CNVD
Neuroblastoma	18923191	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	17603634	CNVD
Neurocytoma	17123091	CNVD
Systemic lupus erythematosus	17503323	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Breast cancer	16608533	CNVD
Melanoma	18172304	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Neuroblastoma	19686582	CNVD
Neuroblastoma	17289879	CNVD
Breast cancer	17899364	CNVD
Breast cancer	17133270	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	22286061	CNVD
Colorectal cancer	16912164	CNVD
Colorectal cancer	16272173	CNVD
Breast cancer	21364760	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
lymphocytic leukemia	21291569	CNVD
Intellectual disability	21811512	CNVD
Breast cancer	22522925	CNVD
Breast cancer	21509527	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
T-cell lymphomas	19863542	CNVD

Chromatin state (count:399 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:56704000-56709400	Active TSS	Right Atrium	heart
2	chr6:56704200-56707600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
3	chr6:56704200-56709200	Active TSS	Skeletal Muscle Male	skeletal muscle
4	chr6:56704600-56709200	Active TSS	HSMMtube	muscle
5	chr6:56704800-56709400	Active TSS	HSMM	muscle
6	chr6:56705000-56709400	Active TSS	Pancreatic Islets	Pancreatic Islet
7	chr6:56705200-56709400	Active TSS	Right Ventricle	heart
8	chr6:56705400-56707600	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
9	chr6:56705400-56707600	Active TSS	Fetal Muscle Trunk	muscle
10	chr6:56705400-56708000	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
11	chr6:56705400-56708000	Flanking Active TSS	HUVEC	blood vessel
12	chr6:56705400-56709200	Active TSS	Brain Cingulate Gyrus	brain
13	chr6:56705400-56709200	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
14	chr6:56705600-56707600	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
15	chr6:56705600-56707600	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
16	chr6:56705600-56707600	Active TSS	Duodenum Smooth Muscle	Duodenum
17	chr6:56705600-56708200	Active TSS	Fetal Heart	heart
18	chr6:56705600-56709200	Active TSS	ES-WA7 Cell Line	embryonic stem cell
19	chr6:56705600-56709200	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
20	chr6:56705600-56709200	Active TSS	Aorta	Aorta
21	chr6:56705600-56709200	Active TSS	Left Ventricle	heart
22	chr6:56705600-56709200	Active TSS	Stomach Smooth Muscle	stomach
23	chr6:56705600-56709200	Active TSS	NHLF	lung
24	chr6:56705600-56709400	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
25	chr6:56705800-56709200	Active TSS	A549	lung
26	chr6:56705800-56709400	Active TSS	Muscle Satellite Cultured Cells	--
27	chr6:56705800-56709400	Active TSS	Brain Anterior Caudate	brain
28	chr6:56706000-56709000	Active TSS	Fetal Brain Female	brain
29	chr6:56706000-56709200	Active TSS	H1 Cell Line	embryonic stem cell
30	chr6:56706000-56709200	Active TSS	Ovary	ovary
31	chr6:56706200-56707600	Active TSS	Fetal Stomach	stomach
32	chr6:56706200-56707800	Bivalent/Poised TSS	Rectal Mucosa Donor 29	rectum
33	chr6:56706200-56709200	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
34	chr6:56706200-56709200	Active TSS	Brain Inferior Temporal Lobe	brain
35	chr6:56706200-56709200	Active TSS	GM12878-XiMat	blood
36	chr6:56706200-56709400	Active TSS	iPS-20b Cell Line	embryonic stem cell
37	chr6:56706400-56707800	Active TSS	Brain Germinal Matrix	brain
38	chr6:56706400-56709200	Active TSS	HUES48 Cell Line	embryonic stem cell
39	chr6:56706400-56709200	Active TSS	Brain Angular Gyrus	brain
40	chr6:56706400-56709400	Active TSS	ES-I3 Cell Line	embryonic stem cell
41	chr6:56706600-56709200	Active TSS	H9 Cell Line	embryonic stem cell
42	chr6:56706800-56708200	Active TSS	Fetal Brain Male	brain
43	chr6:56706800-56709000	Active TSS	NHDF-Ad	bronchial
44	chr6:56706800-56709200	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
45	chr6:56706800-56709200	Active TSS	HUES6 Cell Line	embryonic stem cell
46	chr6:56706800-56709200	Active TSS	iPS-15b Cell Line	embryonic stem cell
47	chr6:56706800-56709400	Active TSS	Brain Substantia Nigra	brain
48	chr6:56707000-56707600	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
49	chr6:56707000-56707600	Active TSS	Fetal Adrenal Gland	Adrenal Gland
50	chr6:56707000-56707600	Active TSS	Rectal Smooth Muscle	rectum

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