Variant report

Variant	esv3355763
Chromosome Location	chr4:100070566-100376814
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1748)
CpG islands
(count:2020)
Chromatin interactive
region (count:35)
LncRNA
region (count:46)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1748 , 50 per page) page: 1 2 3 4 5 6 7 ... 35

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr4:100089099-100089294	HepG2	liver:	n/a	n/a
2	ARID3A	chr4:100324103-100325245	HepG2	liver:	n/a	n/a
3	ARID3A	chr4:100298610-100298828	HepG2	liver:	n/a	n/a
4	ARID3A	chr4:100087752-100088164	HepG2	liver:	n/a	n/a
5	ARID3A	chr4:100078087-100079360	HepG2	liver:	n/a	n/a
6	ARID3A	chr4:100326684-100326994	HepG2	liver:	n/a	n/a
7	ARID3A	chr4:100140191-100140988	HepG2	liver:	n/a	n/a
8	ARID3A	chr4:100080697-100081156	HepG2	liver:	n/a	n/a
9	ARID3A	chr4:100126236-100127065	HepG2	liver:	n/a	n/a
10	ATF2	chr4:100325506-100326473	GM12878	blood:	n/a	n/a
11	ATF2	chr4:100324699-100325143	GM12878	blood:	n/a	n/a
12	ATF2	chr4:100325543-100326370	GM12878	blood:	n/a	n/a
13	BACH1	chr4:100316900-100317245	H1-hESC	embryonic stem cell:	n/a	n/a
14	BACH1	chr4:100368181-100368634	H1-hESC	embryonic stem cell:	n/a	n/a
15	BATF	chr4:100324698-100325103	GM12878	blood:	n/a	n/a
16	BATF	chr4:100113638-100113790	GM12878	blood:	n/a	n/a
17	BATF	chr4:100325594-100326083	GM12878	blood:	n/a	chr4:100325809-100325819
18	BATF	chr4:100368267-100368583	GM12878	blood:	n/a	chr4:100368397-100368408 chr4:100368398-100368408
19	BATF	chr4:100368270-100368600	GM12878	blood:	n/a	chr4:100368397-100368408 chr4:100368398-100368408
20	BATF	chr4:100153182-100153334	GM12878	blood:	n/a	n/a
21	BATF	chr4:100325409-100326360	GM12878	blood:	n/a	chr4:100325809-100325819
22	BCL11A	chr4:100324726-100325142	GM12878	blood:	n/a	n/a
23	BCL11A	chr4:100326107-100326415	GM12878	blood:	n/a	chr4:100326280-100326289
24	BCL11A	chr4:100325594-100326419	GM12878	blood:	n/a	chr4:100325808-100325817 chr4:100326280-100326289 chr4:100325807-100325816
25	BCL11A	chr4:100325745-100326062	GM12878	blood:	n/a	chr4:100325808-100325817 chr4:100325807-100325816
26	BCL3	chr4:100325639-100325997	GM12878	blood:	n/a	chr4:100325808-100325817 chr4:100325807-100325816
27	BCLAF1	chr4:100325678-100326390	GM12878	blood:	n/a	chr4:100325808-100325817 chr4:100326280-100326289 chr4:100325807-100325816
28	BCLAF1	chr4:100325562-100326480	GM12878	blood:	n/a	chr4:100325808-100325817 chr4:100326280-100326289 chr4:100325807-100325816
29	BHLHE40	chr4:100305120-100305434	K562	blood:	n/a	n/a
30	BHLHE40	chr4:100325661-100326414	GM12878	blood:	n/a	n/a
31	BHLHE40	chr4:100078565-100079055	HepG2	liver:	n/a	n/a
32	BRCA1	chr4:100373888-100373982	GM12878	blood:	n/a	n/a
33	BRCA1	chr4:100326705-100327074	HepG2	liver:	n/a	n/a
34	CBX3	chr4:100298443-100298789	HCT-116	colon:	n/a	n/a
35	CEBPB	chr4:100111142-100111424	Hela-S3	cervix:	n/a	chr4:100111245-100111256
36	CEBPB	chr4:100325568-100326531	GM12878	blood:	n/a	n/a
37	CEBPB	chr4:100222100-100222264	HepG2	liver:	n/a	n/a
38	CEBPB	chr4:100078242-100079073	HepG2	liver:	n/a	n/a
39	CEBPB	chr4:100324779-100325140	HepG2	liver:	n/a	n/a
40	CEBPB	chr4:100111070-100111428	K562	blood:	n/a	chr4:100111245-100111256
41	CEBPB	chr4:100126333-100127073	IMR90	lung:	n/a	chr4:100126944-100126955 chr4:100126486-100126497 chr4:100126944-100126955 chr4:100126888-100126900
42	CEBPB	chr4:100313705-100313959	HepG2	liver:	n/a	chr4:100313824-100313835
43	CEBPB	chr4:100313750-100313845	A549	lung:	n/a	chr4:100313824-100313835
44	CEBPB	chr4:100140171-100140332	A549	lung:	n/a	n/a
45	CEBPB	chr4:100078634-100078996	HepG2	liver:	n/a	n/a
46	CEBPB	chr4:100334313-100335137	A549	lung:	n/a	chr4:100334487-100334496 chr4:100334485-100334498 chr4:100334487-100334496 chr4:100334487-100334496
47	CEBPB	chr4:100316099-100316301	A549	lung:	n/a	chr4:100316187-100316198
48	CEBPB	chr4:100305190-100305548	IMR90	lung:	n/a	n/a
49	CEBPB	chr4:100313751-100313951	K562	blood:	n/a	chr4:100313824-100313835
50	CEBPB	chr4:100324796-100325113	HepG2	liver:	n/a	n/a

(count:2020 , 50 per page) page: 1 2 3 4 5 6 7 ... 41

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr4:100212502-100212552	HCM	heart:	n/a
2	chr4:100082970-100083020	AG09319	gingival:	n/a
3	chr4:100368380-100368430	HRCEpiC	kidney:	n/a
4	chr4:100274660-100274710	HCPEpiC	choroid plexus:	n/a
5	chr4:100222470-100222520	GM12891	blood:	n/a
6	chr4:100326030-100326080	HNPCEpiC	eye:	n/a
7	chr4:100274039-100274089	GM12878	blood:	n/a
8	chr4:100212502-100212552	HCM	heart:	n/a
9	chr4:100082970-100083020	AG09319	gingival:	n/a
10	chr4:100368380-100368430	HRCEpiC	kidney:	n/a
11	chr4:100274660-100274710	HCPEpiC	choroid plexus:	n/a
12	chr4:100222470-100222520	GM12891	blood:	n/a
13	chr4:100326030-100326080	HNPCEpiC	eye:	n/a
14	chr4:100274039-100274089	GM12878	blood:	n/a
15	chr4:100222470-100222520	BJ	skin:	n/a
16	chr4:100212502-100212552	AG04450	lung:	fetal
17	chr4:100283539-100283589	HRE	kidney:	n/a
18	chr4:100274660-100274710	AG04449	skin:	fetal
19	chr4:100274710-100274760	HCPEpiC	choroid plexus:	n/a
20	chr4:100368380-100368430	SK-N-MC	brain:	n/a
21	chr4:100212502-100212552	GM06990	blood:	n/a
22	chr4:100244604-100244654	MCF10A-Er-Src	breast:	n/a
23	chr4:100243455-100243505	AoSMC	blood vessel:	n/a
24	chr4:100242957-100243007	CMK	blood:	n/a
25	chr4:100083121-100083171	BJ	skin:	n/a
26	chr4:100125999-100126049	NH-A	brain:	n/a
27	chr4:100274660-100274710	Hepatocyte	liver:	n/a
28	chr4:100140474-100140524	AG09309	skin:	n/a
29	chr4:100174038-100174088	HMEC	breast:	n/a
30	chr4:100212536-100212586	AG10803	skin:	n/a
31	chr4:100128186-100128236	NH-A	brain:	n/a
32	chr4:100274710-100274760	HAEpiC	amniotic membrane:	n/a
33	chr4:100174038-100174088	MCF10A-Er-Src	breast:	n/a
34	chr4:100222470-100222520	MCF10A-Er-Src	breast:	n/a
35	chr4:100101289-100101339	HUVEC	blood vessel:	n/a
36	chr4:100274039-100274089	MCF-7	breast:	n/a
37	chr4:100083331-100083381	SKMC	muscle:	n/a
38	chr4:100304422-100304472	GM12878	blood:	n/a
39	chr4:100316760-100316810	ProgFib	skin:	n/a
40	chr4:100101289-100101339	IMR90	lung:	fetal
41	chr4:100274660-100274710	Caco-2	colon:	n/a
42	chr4:100101289-100101339	GM12892	blood:	n/a
43	chr4:100130470-100130520	NT2-D1	testis:	n/a
44	chr4:100356538-100356588	HRCEpiC	kidney:	n/a
45	chr4:100128186-100128236	HRE	kidney:	n/a
46	chr4:100140905-100140955	HRCEpiC	kidney:	n/a
47	chr4:100244604-100244654	HRPEpiC	eye:	n/a
48	chr4:100143367-100143417	RPTEC	kidney:	n/a
49	chr4:100212502-100212552	NHBE	bronchial:	n/a
50	chr4:100212536-100212586	Hela-S3	cervix:	n/a

(count:35 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr4:100231557..100233908-chr4:100237578..100239506,2	K562	blood:
2	chr4:100326668..100327341-chr4:100729597..100730107,2	K562	blood:
3	chr4:100226234..100228316-chr4:100230420..100232273,2	K562	blood:
4	chr4:100360403..100361217-chr4:100383908..100384668,4	MCF-7	breast:
5	chr4:100350531..100352206-chr4:100353778..100356045,2	K562	blood:
6	chr4:100122531..100123516-chr4:100326382..100326915,3	MCF-7	breast:
7	chr4:100249625..100252451-chr4:100254684..100257121,2	MCF-7	breast:
8	chr4:100310446..100313009-chr4:100317982..100320631,2	MCF-7	breast:
9	chr4:100010287..100011807-chr4:100330778..100333619,2	MCF-7	breast:
10	chr4:100333015..100337479-chr4:100337485..100340036,5	K562	blood:
11	chr4:100008556..100011028-chr4:100365658..100368311,2	MCF-7	breast:
12	chr4:100249625..100252451-chr4:100254684..100257121,2	MCF-7	breast:
13	chr4:99916019..99918646-chr4:100083097..100084598,2	K562	blood:
14	chr4:100360736..100361324-chr4:100378145..100379030,2	MCF-7	breast:
15	chr4:100038972..100039679-chr4:100326321..100327345,4	K562	blood:
16	chr4:100122648..100123636-chr4:100326377..100326984,3	MCF-7	breast:
17	chr4:100039211..100039845-chr4:100326145..100326879,2	MCF-7	breast:
18	chr4:100156930..100159755-chr4:100162612..100165186,2	K562	blood:
19	chr4:100069725..100072421-chr4:100081070..100082749,2	K562	blood:
20	chr4:100226234..100228316-chr4:100230420..100232273,2	K562	blood:
21	chr4:100305669..100308153-chr4:100323614..100325845,2	K562	blood:
22	chr4:100274015..100276033-chr4:100276643..100278857,2	K562	blood:
23	chr4:100201270..100203218-chr4:100206334..100208825,2	K562	blood:
24	chr4:100122648..100123636-chr4:100326377..100326984,3	MCF-7	breast:
25	chr10:105472283..105472865-chr4:100256192..100256712,2	K562	blood:
26	chr4:100323711..100324455-chr4:100383736..100384261,2	MCF-7	breast:
27	chr4:100305669..100308153-chr4:100323614..100325845,2	K562	blood:
28	chr4:99915893..99916919-chr4:100326329..100327016,3	K562	blood:
29	chr4:100156930..100159755-chr4:100162612..100165186,2	K562	blood:
30	chr4:100259144..100260774-chr4:100261569..100263685,2	K562	blood:
31	chr4:100310446..100313009-chr4:100317982..100320631,2	MCF-7	breast:
32	chr4:100231557..100233908-chr4:100237578..100239506,2	K562	blood:
33	chr4:100201270..100203218-chr4:100206334..100208825,2	K562	blood:
34	chr4:100122531..100123516-chr4:100326382..100326915,3	MCF-7	breast:
35	chr4:100259144..100260774-chr4:100261569..100263685,2	K562	blood:

(count:46 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-METAP1-6	chr4:100101303-100101330	l_2690_chr4:100101302-100104555_testes
2	lnc-METAP1-3	chr4:100175086-100175220	ENSG00000246090
3	lnc-METAP1-3	chr4:100173992-100174289	ENSG00000246090
4	lnc-METAP1-3	chr4:100082941-100083061	ENSG00000246090
5	lnc-METAP1-3	chr4:100184659-100184733	ENSG00000246090
6	lnc-METAP1-3	chr4:100188214-100188262	ENSG00000246090
7	lnc-METAP1-3	chr4:100175531-100175596	ENSG00000246090
8	lnc-METAP1-3	chr4:100075702-100078736	ENSG00000246090
9	lnc-METAP1-3	chr4:100221626-100221812	ENSG00000246090
10	lnc-METAP1-3	chr4:100196119-100196208	ENSG00000246090
11	lnc-METAP1-3	chr4:100222108-100222513	ENSG00000246090
12	lnc-ADH4-1	chr4:100081671-100082422	NONHSAT097522
13	lnc-ADH7-1	chr4:100304505-100304777	NONHSAT097533
14	lnc-C4orf17-3	chr4:100242555-100242580	l_2691_chr4:100229213-100242580_adipose
15	lnc-METAP1-3	chr4:100199610-100199666	ENSG00000246090
16	lnc-ADH4-1	chr4:100081751-100082804	NONHSAT097523
17	lnc-C4orf17-2	chr4:100297687-100297759	l_2692_chr4:100297686-100299782_prostate
18	lnc-ADH1A-1	chr4:100136952-100137419	NONHSAT097527
19	lnc-METAP1-3	chr4:100195282-100195412	ENSG00000246090
20	lnc-METAP1-3	chr4:100125514-100125584	ENSG00000246090
21	lnc-METAP1-3	chr4:100188828-100188993	ENSG00000246090
22	lnc-METAP1-3	chr4:100212094-100212105	ENSG00000246090
23	lnc-METAP1-6	chr4:100103643-100103769	l_2690_chr4:100101302-100104555_testes
24	lnc-C4orf17-2	chr4:100299601-100299782	l_2692_chr4:100297686-100299782_prostate
25	lnc-METAP1-3	chr4:100221626-100221812	ENSG00000246090
26	lnc-METAP1-3	chr4:100082967-100083061	ENSG00000246090
27	lnc-METAP1-6	chr4:100104128-100104555	l_2690_chr4:100101302-100104555_testes
28	lnc-METAP1-3	chr4:100125514-100125588	ENSG00000246090
29	lnc-METAP1-3	chr4:100195282-100195412	ENSG00000246090
30	lnc-ADH7-1	chr4:100323990-100324091	NONHSAT097533
31	lnc-METAP1-3	chr4:100109802-100110012	ENSG00000246090
32	lnc-METAP1-3	chr4:100221456-100221527	ENSG00000246090
33	lnc-METAP1-3	chr4:100207952-100208190	ENSG00000246090
34	lnc-METAP1-3	chr4:100202339-100202398	ENSG00000246090
35	lnc-ADH4-1	chr4:100082094-100082802	NONHSAT097524
36	lnc-METAP1-3	chr4:100222108-100222455	ENSG00000246090
37	lnc-METAP1-3	chr4:100188721-100188921	ENSG00000246090
38	lnc-METAP1-3	chr4:100196119-100196208	ENSG00000246090
39	lnc-METAP1-3	chr4:100209823-100209942	ENSG00000246090
40	lnc-METAP1-3	chr4:100175077-100175220	ENSG00000246090
41	lnc-C4orf17-3	chr4:100229214-100229458	l_2691_chr4:100229213-100242580_adipose
42	lnc-METAP1-3	chr4:100212093-100212162	ENSG00000246090
43	lnc-ADH1A-1	chr4:100140292-100140403	NONHSAT097527
44	lnc-METAP1-3	chr4:100125514-100125588	ENSG00000246090
45	lnc-METAP1-3	chr4:100184659-100184967	ENSG00000246090
46	lnc-METAP1-3	chr4:100221456-100221527	ENSG00000246090

No data

Variant related genes	Relation type
ADH6	TF binding region
ADH7	TF binding region
PCNAP1	TF binding region
ADH4	TF binding region
ADH1C	TF binding region
ADH1B	TF binding region
ADH1A	TF binding region
ENSG00000246090	TF binding region
ADH6	CpG island
ADH7	CpG island
PCNAP1	CpG island
ADH4	CpG island
ADH1C	CpG island
ADH1B	CpG island
ADH1A	CpG island
ENSG00000246090	CpG island
ENSG00000249065	chromatin interactions
ENSG00000164024	chromatin interactions
ENSG00000197894	chromatin interactions
ENSG00000248144	chromatin interactions
ENSG00000196344	chromatin interactions
ENSG00000246090	chromatin interactions
ENSG00000265213	chromatin interactions

Extended variants
information (count: 10773 )
Associated
traits (count: 81 )

Variant overlapped rSNPs/rCNVs (count:10773 , 50 per page) page: 1 2 3 4 5 6 7 ... 216

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs202080455	chr4:100070592-100070593	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
2	rs200365180	chr4:100070603-100070604	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs201579442	chr4:100070604-100070605	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs531917808	chr4:100070663-100070664	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs182803235	chr4:100070724-100070725	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs562134876	chr4:100070728-100070729	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs186351590	chr4:100070742-100070743	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs547468521	chr4:100070752-100070753	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs1984364	chr4:100070783-100070784	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
10	rs12649136	chr4:100070816-100070817	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs190757059	chr4:100070826-100070827	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs556258112	chr4:100070844-100070845	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs1984363	chr4:100070881-100070882	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
14	rs17028609	chr4:100070885-100070886	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
15	rs537740362	chr4:100070897-100070898	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs182588461	chr4:100070965-100070966	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs1984362	chr4:100070973-100070974	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
18	rs115358255	chr4:100070974-100070975	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs558078363	chr4:100070988-100070989	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs386677715	chr4:100071040-100071041	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs553868873	chr4:100071052-100071053	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs572196183	chr4:100071138-100071139	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs200693238	chr4:100071194-100071195	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs144701331	chr4:100071195-100071196	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs573098902	chr4:100071235-100071236	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs563937807	chr4:100071328-100071329	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs2213032	chr4:100071358-100071359	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
28	rs543734177	chr4:100071370-100071371	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs192283390	chr4:100071491-100071492	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs540035210	chr4:100071507-100071508	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs147912984	chr4:100071521-100071522	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs547603843	chr4:100071523-100071524	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs201584669	chr4:100071552-100071553	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs555453016	chr4:100071569-100071570	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs72679823	chr4:100071602-100071603	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
36	rs533261065	chr4:100071603-100071604	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs551889773	chr4:100071606-100071607	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs569945565	chr4:100071645-100071646	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs6850191	chr4:100071687-100071688	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
40	rs386677716	chr4:100071690-100071691	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs6824171	chr4:100071691-100071692	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
42	rs187089651	chr4:100071722-100071723	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs554015730	chr4:100071724-100071725	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs572133102	chr4:100071737-100071738	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs539532566	chr4:100071763-100071764	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs557882835	chr4:100071772-100071773	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs147042599	chr4:100071800-100071801	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs532756800	chr4:100071826-100071827	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs567589880	chr4:100071861-100071862	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs192256934	chr4:100071890-100071891	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:81)

Disease	PMID	Source
Acute lymphoblastic leukemia	22237106	CNVD
Glioblastoma multiforme	21080181	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
HIV/AIDS	22032296	CNVD
Medulloblastoma	21979893	CNVD
Neuroblastoma	18923191	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Breast cancer	21858162	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Gastric cancer	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Melanoma	18172304	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	17603634	CNVD
Hepatocellular carcinoma	16750200	CNVD
Myxofibrosarcoma	16751306	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Breast cancer	16272173	CNVD
Colorectal cancer	19359472	CNVD
Malignant mesothelioma	18160781	CNVD
Medulloblastoma	18056178	CNVD
Multiple myeloma	17077331	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Oral squamous cell carcinoma	17134496	CNVD
4q-syndrome	17576883	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Colorectal cancer	20709793	CNVD
Muscular dystrophy	21149563	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Cervical cancer	21062161	CNVD
Metanephric adenoma	20802469	CNVD
Breast cancer	16608533	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Lung cancer	19208797	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	21785460	CNVD
Myelodysplastic syndrome	21251322	CNVD
Lung cancer	18438408	CNVD
Cancer	22429812	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Autism	18414403	CNVD
Cancer	21183584	CNVD
primary effusion lymphomas	17116491	CNVD
small cell lung cancer	20016488	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	17133270	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Colorectal cancer	20459617	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Hirschsprung''s Disease	21712996	CNVD
Congenital anomalies of the kidney and urinary tract	20505237	CNVD
Breast cancer	17393978	CNVD
Ovarian cancer	21720365	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Esophageal cancer	21851588	CNVD
Prostate cancer	16573809	CNVD
Multiple myeloma	16616336	CNVD
Melanoma	20688739	CNVD
Gastric cancer	16891809	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	16397240	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Pancreatic cancer	17952125	CNVD
Ovarian cancer	21781307	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:1669 , 50 per page) page: 1 2 3 4 5 6 7 ... 34

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:100035000-100098200	Weak transcription	Ovary	ovary
2	chr4:100056800-100082600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
3	chr4:100064000-100082600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr4:100065600-100071600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr4:100065600-100096600	Weak transcription	Fetal Lung	lung
6	chr4:100066200-100083200	Enhancers	Liver	Liver
7	chr4:100066400-100070600	Weak transcription	Small Intestine	intestine
8	chr4:100066600-100070600	Weak transcription	Cortex derived primary cultured neurospheres	brain
9	chr4:100066600-100071000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr4:100066600-100082600	Weak transcription	Pancreas	Pancrea
11	chr4:100068800-100071600	Enhancers	Fetal Intestine Small	intestine
12	chr4:100069000-100071200	Enhancers	Fetal Intestine Large	intestine
13	chr4:100069200-100071000	Enhancers	HepG2	liver
14	chr4:100069400-100071400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
15	chr4:100069800-100070800	Weak transcription	Rectal Mucosa Donor 29	rectum
16	chr4:100070000-100070800	Weak transcription	Duodenum Smooth Muscle	Duodenum
17	chr4:100070200-100071600	Enhancers	Duodenum Mucosa	Duodenum
18	chr4:100070400-100071000	Enhancers	Rectal Mucosa Donor 31	rectum
19	chr4:100070600-100070800	ZNF genes & repeats	Cortex derived primary cultured neurospheres	brain
20	chr4:100070600-100071000	Enhancers	Small Intestine	intestine
21	chr4:100070600-100071000	Enhancers	Dnd41	blood
22	chr4:100070800-100071000	Enhancers	Rectal Mucosa Donor 29	rectum
23	chr4:100070800-100071200	Enhancers	Duodenum Smooth Muscle	Duodenum
24	chr4:100070800-100071600	Enhancers	Colonic Mucosa	Colon
25	chr4:100071000-100071600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
26	chr4:100071200-100071800	Enhancers	Primary T helper naive cells from peripheral blood	blood
27	chr4:100071200-100073600	Weak transcription	Fetal Intestine Large	intestine
28	chr4:100071200-100078200	Weak transcription	NHDF-Ad	bronchial
29	chr4:100071400-100071600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
30	chr4:100071600-100071800	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
31	chr4:100071600-100072000	ZNF genes & repeats	Fetal Intestine Small	intestine
32	chr4:100071600-100072200	ZNF genes & repeats	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
33	chr4:100071600-100073600	Weak transcription	Duodenum Mucosa	Duodenum
34	chr4:100072000-100072800	Weak transcription	Fetal Intestine Small	intestine
35	chr4:100072200-100078000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
36	chr4:100072200-100101400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
37	chr4:100072800-100073000	Enhancers	Fetal Intestine Small	intestine
38	chr4:100072800-100074000	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell
39	chr4:100073000-100073400	Weak transcription	Fetal Intestine Small	intestine
40	chr4:100073400-100073800	Enhancers	Stomach Mucosa	stomach
41	chr4:100073400-100074400	Enhancers	Fetal Intestine Small	intestine
42	chr4:100073600-100074000	Enhancers	Duodenum Mucosa	Duodenum
43	chr4:100073600-100074000	Enhancers	Fetal Intestine Large	intestine
44	chr4:100073800-100078200	Weak transcription	Stomach Mucosa	stomach
45	chr4:100074000-100075600	Weak transcription	Duodenum Mucosa	Duodenum
46	chr4:100074000-100077400	Weak transcription	Fetal Intestine Large	intestine
47	chr4:100074400-100075800	Weak transcription	Fetal Intestine Small	intestine
48	chr4:100074600-100085400	Weak transcription	Cortex derived primary cultured neurospheres	brain
49	chr4:100075600-100076000	Enhancers	Duodenum Mucosa	Duodenum
50	chr4:100075600-100083200	Enhancers	HepG2	liver

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