Variant report

Variant	esv3355810
Chromosome Location	chr3:120925962-120930760
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 251 )
Associated
traits (count: 56 )

Variant overlapped rSNPs/rCNVs (count:251 , 50 per page) page: 1 2 3 4 5 6

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs184156883	chr3:120925965-120925966	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs575040751	chr3:120925968-120925969	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs575259878	chr3:120925972-120925973	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs575206132	chr3:120925973-120925974	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs188830647	chr3:120925978-120925979	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs561635621	chr3:120925995-120925996	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs575071851	chr3:120926054-120926055	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs180801152	chr3:120926070-120926071	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs553685723	chr3:120926075-120926076	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs200089152	chr3:120926135-120926136	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs374910733	chr3:120926148-120926149	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs113634459	chr3:120926156-120926157	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs560700832	chr3:120926173-120926174	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs185403085	chr3:120926202-120926203	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs551522358	chr3:120926219-120926220	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs564925862	chr3:120926244-120926245	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs140172152	chr3:120926248-120926249	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs368165307	chr3:120926337-120926338	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs567249615	chr3:120926346-120926347	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs142185363	chr3:120926348-120926349	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs146366059	chr3:120926382-120926383	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs139658029	chr3:120926391-120926392	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs4571175	chr3:120926395-120926396	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs538420975	chr3:120926405-120926406	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs190254685	chr3:120926418-120926419	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs201217608	chr3:120926462-120926463	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs202004282	chr3:120926468-120926469	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs150014402	chr3:120926498-120926499	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs538327812	chr3:120926514-120926515	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs182428932	chr3:120926547-120926548	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs574755392	chr3:120926602-120926603	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs540585596	chr3:120926603-120926604	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs186548248	chr3:120926625-120926626	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs577516433	chr3:120926657-120926658	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs201606770	chr3:120926668-120926669	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs145234310	chr3:120926696-120926697	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs563061543	chr3:120926768-120926769	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs530563768	chr3:120926787-120926788	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs191848162	chr3:120926791-120926792	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs556278252	chr3:120926822-120926823	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs560757794	chr3:120926837-120926838	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs200956081	chr3:120926911-120926912	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs529659624	chr3:120926928-120926929	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs546514912	chr3:120926949-120926950	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs183038234	chr3:120927004-120927005	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs532185032	chr3:120927032-120927033	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs551994290	chr3:120927047-120927048	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs148724687	chr3:120927100-120927101	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs576472201	chr3:120927104-120927105	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs113281316	chr3:120927168-120927169	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:56)

Disease	PMID	Source
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
Cancer	21183584	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Bipolar disorder	20877625	CNVD
Bipolar disorder	21956041	CNVD
Bipolar disorder	22241247	CNVD
Biliary cancer	18923514	CNVD
Prostate cancer	21965145	CNVD
Cancer	21129771	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Cervical cancer	21062161	CNVD
Squamous cell cancer	20885788	CNVD
Melanoma	18172304	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Bipolar disorder	18458673	CNVD
Breast cancer	22032731	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Breast cancer	16461572	CNVD
Neuroblastoma	17533364	CNVD
microdeletion syndrome	22180640	CNVD
Cervical Cancer	21857958	CNVD
Melanoma	21693616	CNVD
Lung cancer	21426551	CNVD
Cancer	21637783	CNVD
Cervical cancer	21063398	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Liposarcoma	21253554	CNVD
Oral cancer	21386901	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	22065749	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	16608533	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Developmental delay	22180640	CNVD
Multiple myeloma	17550852	CNVD
Basal cell lymphoma	21115979	CNVD
Ovarian cancer	22174824	CNVD
lymphocytic leukemia	21291569	CNVD
small cell lung cancer	20016488	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Autism	22241247	CNVD
Breast cancer	22522925	CNVD
Chordoma	21215367	CNVD

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:120914800-120935400	Weak transcription	Ovary	ovary

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links