Variant report

Variant	esv3356496
Chromosome Location	chr5:179920371-179922919
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:629)
CpG islands
(count:612)
Chromatin interactive
region (count:10)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:629 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr5:179921113-179921482	HepG2	liver:	n/a	n/a
2	ARID3A	chr5:179921098-179921441	K562	blood:	n/a	n/a
3	ARID3A	chr5:179920256-179920489	HepG2	liver:	n/a	n/a
4	ATF2	chr5:179921005-179921489	GM12878	blood:	n/a	n/a
5	BACH1	chr5:179921849-179922049	H1-hESC	embryonic stem cell:	n/a	n/a
6	BATF	chr5:179920672-179920856	GM12878	blood:	n/a	n/a
7	BCL3	chr5:179920888-179921352	A549	lung:	n/a	n/a
8	BCL3	chr5:179920971-179921485	A549	lung:	n/a	chr5:179921385-179921398
9	BCLAF1	chr5:179920923-179921525	GM12878	blood:	n/a	chr5:179921385-179921398
10	BHLHE40	chr5:179921021-179921760	HepG2	liver:	n/a	chr5:179921201-179921217 chr5:179921352-179921368
11	BHLHE40	chr5:179921030-179921507	K562	blood:	n/a	chr5:179921201-179921217 chr5:179921352-179921368
12	BHLHE40	chr5:179921070-179921448	A549	lung:	n/a	chr5:179921201-179921217 chr5:179921352-179921368
13	BHLHE40	chr5:179921026-179921502	GM12878	blood:	n/a	chr5:179921201-179921217 chr5:179921352-179921368
14	BRCA1	chr5:179921084-179921414	H1-hESC	embryonic stem cell:	n/a	n/a
15	BRCA1	chr5:179921108-179921449	HepG2	liver:	n/a	n/a
16	BRCA1	chr5:179921080-179921450	Hela-S3	cervix:	n/a	n/a
17	BRCA1	chr5:179921129-179921385	GM12878	blood:	n/a	n/a
18	CBX3	chr5:179921050-179921324	K562	blood:	n/a	n/a
19	CBX3	chr5:179920966-179921464	K562	blood:	n/a	n/a
20	CCNT2	chr5:179921067-179922235	K562	blood:	n/a	chr5:179922219-179922228 chr5:179921246-179921255
21	CEBPB	chr5:179921159-179921427	Hela-S3	cervix:	n/a	n/a
22	CEBPD	chr5:179921284-179921553	HepG2	liver:	n/a	n/a
23	CEBPD	chr5:179921756-179922001	HepG2	liver:	n/a	n/a
24	CEBPD	chr5:179921003-179921260	HepG2	liver:	n/a	n/a
25	CHD1	chr5:179921071-179922323	H1-hESC	embryonic stem cell:	n/a	n/a
26	CHD1	chr5:179921022-179922477	IMR90	lung:	n/a	n/a
27	CHD1	chr5:179920964-179921858	GM12878	blood:	n/a	n/a
28	CHD2	chr5:179921085-179921772	GM12878	blood:	n/a	n/a
29	CHD2	chr5:179921060-179921423	H1-hESC	embryonic stem cell:	n/a	n/a
30	CHD2	chr5:179921053-179921905	Hela-S3	cervix:	n/a	n/a
31	CHD2	chr5:179921104-179921483	K562	blood:	n/a	n/a
32	CHD2	chr5:179921097-179921446	HepG2	liver:	n/a	n/a
33	CREB1	chr5:179920956-179921576	K562	blood:	n/a	n/a
34	CREB1	chr5:179920937-179921662	H1-hESC	embryonic stem cell:	n/a	n/a
35	CREB1	chr5:179921005-179921687	H1-hESC	embryonic stem cell:	n/a	n/a
36	CREB1	chr5:179921114-179921413	A549	lung:	n/a	n/a
37	CREB1	chr5:179921018-179922106	K562	blood:	n/a	n/a
38	CREB1	chr5:179921055-179922160	GM12878	blood:	n/a	n/a
39	CREB1	chr5:179921027-179922203	A549	lung:	n/a	n/a
40	CREB1	chr5:179920947-179922229	HepG2	liver:	n/a	n/a
41	CREB1	chr5:179921014-179921678	HepG2	liver:	n/a	n/a
42	CTCF	chr5:179921560-179921710	GM12874	blood:	n/a	n/a
43	CTCF	chr5:179922100-179922250	SK-N-SH_RA	brain:	n/a	n/a
44	CTCF	chr5:179921700-179921850	HBMEC	blood vessel:	n/a	n/a
45	CTCF	chr5:179921740-179921890	SAEC	small airway:	n/a	n/a
46	CTCF	chr5:179921591-179921820	GM12878	blood:	n/a	n/a
47	CTCF	chr5:179921147-179921364	GM12878	blood:	n/a	n/a
48	CTCF	chr5:179922060-179922210	AG10803	skin:	n/a	n/a
49	CTCF	chr5:179921600-179921750	SK-N-SH_RA	brain:	n/a	n/a
50	CTCF	chr5:179921620-179921770	GM12865	blood:	n/a	n/a

(count:612 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr5:179921349-179921399	HepG2	liver:	n/a
2	chr5:179921349-179921399	HNPCEpiC	eye:	n/a
3	chr5:179921349-179921399	HepG2	liver:	n/a
4	chr5:179921349-179921399	HNPCEpiC	eye:	n/a
5	chr5:179920971-179921021	NT2-D1	testis:	n/a
6	chr5:179921704-179921754	K562	blood:	n/a
7	chr5:179921426-179921476	HNPCEpiC	eye:	n/a
8	chr5:179922147-179922197	GM19239	blood:	n/a
9	chr5:179922339-179922389	SK-N-SH	brain:	n/a
10	chr5:179920971-179921021	K562	blood:	n/a
11	chr5:179922147-179922197	ECC-1	luminal epithelium:	n/a
12	chr5:179921349-179921399	BJ	skin:	n/a
13	chr5:179921704-179921754	SK-N-SH	brain:	n/a
14	chr5:179921655-179921705	SK-N-SH_RA	brain:	n/a
15	chr5:179921286-179921336	MCF-7	breast:	n/a
16	chr5:179921704-179921754	GM12891	blood:	n/a
17	chr5:179922147-179922197	AoSMC	blood vessel:	n/a
18	chr5:179922147-179922197	H1-hESC	embryonic stem cell:	embryo
19	chr5:179920971-179921021	HRE	kidney:	n/a
20	chr5:179920971-179921021	H1-hESC	embryonic stem cell:	embryo
21	chr5:179920971-179921021	SAEC	small airway:	n/a
22	chr5:179921670-179921720	IMR90	lung:	fetal
23	chr5:179921704-179921754	GM06990	blood:	n/a
24	chr5:179921286-179921336	K562	blood:	n/a
25	chr5:179921426-179921476	HepG2	liver:	n/a
26	chr5:179920971-179921021	GM12892	blood:	n/a
27	chr5:179921704-179921754	Jurkat	blood:	n/a
28	chr5:179921426-179921476	NH-A	brain:	n/a
29	chr5:179921655-179921705	HPAEpiC	pulmonary alveolar:	n/a
30	chr5:179920582-179920632	Caco-2	colon:	n/a
31	chr5:179922339-179922389	NH-A	brain:	n/a
32	chr5:179921426-179921476	MCF10A-Er-Src	breast:	n/a
33	chr5:179921704-179921754	HRE	kidney:	n/a
34	chr5:179921286-179921336	NH-A	brain:	n/a
35	chr5:179921426-179921476	BE2_C	brain:	n/a
36	chr5:179921670-179921720	SK-N-SH_RA	brain:	n/a
37	chr5:179921286-179921336	ECC-1	luminal epithelium:	n/a
38	chr5:179921286-179921336	HRPEpiC	eye:	n/a
39	chr5:179922339-179922389	A549	lung:	n/a
40	chr5:179922339-179922389	AG09309	skin:	n/a
41	chr5:179921655-179921705	ovcar-3	ovarian:	n/a
42	chr5:179920582-179920632	HCT-116	colon:	n/a
43	chr5:179921426-179921476	BJ	skin:	n/a
44	chr5:179921704-179921754	HCM	heart:	n/a
45	chr5:179921655-179921705	T-47D	breast:	n/a
46	chr5:179921426-179921476	ovcar-3	ovarian:	n/a
47	chr5:179921349-179921399	K562	blood:	n/a
48	chr5:179922339-179922389	GM12878	blood:	n/a
49	chr5:179921426-179921476	Hepatocyte	liver:	n/a
50	chr5:179921670-179921720	ECC-1	luminal epithelium:	n/a

(count:10 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr19:47353550..47354350-chr5:179921157..179921678,2	Hela-S3	cervix:
2	chr5:179920260..179922999-chr5:180038598..180040134,2	MCF-7	breast:
3	chr15:40226287..40226791-chr5:179921184..179922100,2	Hela-S3	cervix:
4	chr5:179778332..179781251-chr5:179920436..179923318,3	MCF-7	breast:
5	chr12:120730813..120731447-chr5:179921399..179922129,2	Hela-S3	cervix:
6	chr5:179718755..179721306-chr5:179919977..179922949,4	MCF-7	breast:
7	chr5:179919075..179921338-chr5:180210769..180213087,2	MCF-7	breast:
8	chr22:19434914..19435485-chr5:179921372..179922106,2	Hela-S3	cervix:
9	chr5:179920138..179923580-chr5:179954774..179958751,3	MCF-7	breast:
10	chr5:179720972..179723069-chr5:179918796..179921248,2	MCF-7	breast:

No data

Variant related genes	Relation type
CNOT6	TF binding region
CNOT6	CpG island
ENSG00000113300	chromatin interactions
ENSG00000042753	chromatin interactions
ENSG00000242259	chromatin interactions
ENSG00000128829	chromatin interactions
ENSG00000248367	chromatin interactions
ENSG00000050748	chromatin interactions
ENSG00000131459	chromatin interactions
ENSG00000200795	chromatin interactions
ENSG00000185065	chromatin interactions
ENSG00000100084	chromatin interactions
ENSG00000037280	chromatin interactions

Extended variants
information (count: 116 )
Associated
traits (count: 101 )

Variant overlapped rSNPs/rCNVs (count:116 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs77611814	chr5:179920378-179920379	Weak transcription ZNF genes & repeats Bivalent Enhancer Enhancers Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
2	rs147081570	chr5:179920398-179920399	Weak transcription ZNF genes & repeats Bivalent Enhancer Enhancers Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
3	rs115558888	chr5:179920399-179920400	Weak transcription ZNF genes & repeats Bivalent Enhancer Enhancers Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
4	rs375657834	chr5:179920405-179920406	Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
5	rs370573597	chr5:179920421-179920422	Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
6	rs554715956	chr5:179920445-179920446	Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
7	rs574557817	chr5:179920489-179920490	Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
8	rs563362635	chr5:179920494-179920495	Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
9	rs13172721	chr5:179920543-179920544	Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
10	rs549095364	chr5:179920612-179920613	Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers	TF binding region CpG island Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
11	rs565932867	chr5:179920618-179920619	Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers	TF binding region CpG island Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
12	rs535263048	chr5:179920619-179920620	Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers	TF binding region CpG island Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
13	rs368977930	chr5:179920620-179920621	Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers	TF binding region CpG island Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
14	rs564015321	chr5:179920657-179920658	Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
15	rs560940239	chr5:179920684-179920685	Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
16	rs551692950	chr5:179920707-179920708	Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
17	rs13158465	chr5:179920736-179920737	Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
18	rs537368316	chr5:179920740-179920741	Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
19	rs556163516	chr5:179920756-179920757	Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
20	rs386695771	chr5:179920761-179920762	Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
21	rs13176818	chr5:179920762-179920763	Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
22	rs569306821	chr5:179920766-179920767	Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
23	rs13158479	chr5:179920768-179920769	Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
24	rs13175633	chr5:179920783-179920784	Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
25	rs71598626	chr5:179920788-179920789	Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
26	rs13175636	chr5:179920791-179920792	Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
27	rs13175643	chr5:179920803-179920804	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
28	rs71598627	chr5:179920808-179920809	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
29	rs13175649	chr5:179920813-179920814	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
30	rs139453970	chr5:179920814-179920815	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
31	rs185243692	chr5:179920833-179920834	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
32	rs559380532	chr5:179920861-179920862	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
33	rs528580855	chr5:179920869-179920870	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
34	rs551926262	chr5:179920876-179920877	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
35	rs571766916	chr5:179920877-179920878	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
36	rs531221414	chr5:179920879-179920880	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
37	rs558287923	chr5:179920885-179920886	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
38	rs551326502	chr5:179920910-179920911	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
39	rs13162858	chr5:179920933-179920934	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
40	rs113721100	chr5:179920957-179920958	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
41	rs6861269	chr5:179920963-179920964	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
42	rs6883309	chr5:179920966-179920967	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
43	rs6887532	chr5:179920995-179920996	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region CpG island Chromatin interactive region	6 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
44	rs534440652	chr5:179921002-179921003	Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Enhancers	TF binding region CpG island Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
45	rs146711076	chr5:179921014-179921015	Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Enhancers	TF binding region CpG island Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
46	rs577795272	chr5:179921038-179921039	Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
47	rs189574842	chr5:179921082-179921083	Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
48	rs181987198	chr5:179921120-179921121	Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
49	rs573607735	chr5:179921147-179921148	Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
50	rs542567293	chr5:179921153-179921154	Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:101)

Disease	PMID	Source
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Medulloblastoma	21979893	CNVD
Phyllodes tumor	17334353	CNVD
Malaria	21533027	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	20164919	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	16751803	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Glioma	20126413	CNVD
Cancer	22429812	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Liposarcoma	21253554	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Leukemia	17361228	CNVD
Myelodysplastic syndrome	18508791	CNVD
5q-syndrome	17576883	CNVD
Gastric cancer	17908304	CNVD
Lung cancer	16740712	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Urothelial carcinoma	21177765	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Barrett''s syndrome	19417022	CNVD
Thyroid cancer	19087340	CNVD
Acute myeloid leukemia	20729466	CNVD
lymphocytic leukemia	21291569	CNVD
Multiple myeloma	17550852	CNVD
Salivary gland tumor	18059337	CNVD
Renal cell carcinoma	19377443	CNVD
Lung cancer	18438408	CNVD
Gastrointestinal stromal cancer	19259404	CNVD
Renal cell carcinoma	18592004	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Embryonal rhabdomyosarcoma	16790082	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Prostate cancer	18632612	CNVD
epilepsy	18472482	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Sotos syndrome	21572526	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Sotos syndrome	17561922	CNVD
Sotos syndrome	16773131	CNVD
Mental retardation	16773131	CNVD
Sotos syndrome	22470819	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Acute myeloid leukemia	18000384	CNVD
Sudden cardiac death	19188705	CNVD
Basal cell lymphoma	16317097	CNVD
Chordoma	18071362	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Olfactory neuroblastoma	18408657	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
abnormal development	18461090	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Lung cancer	17297452	CNVD
Cancer	20164920	CNVD
Breast cancer	21509527	CNVD
Breast cancer	21804112	CNVD
Myelofibrosis	22110671	CNVD
Sotos syndrome	22283845	CNVD
Breast cancer	16272173	CNVD
Sotos syndrome	20503325	CNVD
Lung adenocarcinoma	17086460	CNVD
Congenital Hypertrichosis Syndrome	21636067	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Breast cancer	19181860	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Ehlers-danlos syndrome	17576883	CNVD
Lung cancer	17086460	CNVD
Autism	19246517	CNVD
Basal cell lymphoma	19029149	CNVD
Diffuse large b-cell lymphoma	19029149	CNVD
Autism	22543975	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:462 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:179900000-179920400	Weak transcription	A549	lung
2	chr5:179912000-179920400	Weak transcription	NHDF-Ad	bronchial
3	chr5:179914200-179920400	Weak transcription	Fetal Stomach	stomach
4	chr5:179914600-179920400	Weak transcription	Stomach Smooth Muscle	stomach
5	chr5:179915000-179921000	Weak transcription	Aorta	Aorta
6	chr5:179915600-179920400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
7	chr5:179916400-179920400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
8	chr5:179916800-179920400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
9	chr5:179917400-179920800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
10	chr5:179917800-179920400	Weak transcription	Brain Angular Gyrus	brain
11	chr5:179918200-179920400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
12	chr5:179918400-179921000	Weak transcription	Lung	lung
13	chr5:179918600-179920400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
14	chr5:179918600-179920400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
15	chr5:179918600-179921000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
16	chr5:179918600-179921000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
17	chr5:179918800-179920400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
18	chr5:179918800-179921600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
19	chr5:179919000-179920400	Weak transcription	HUES6 Cell Line	embryonic stem cell
20	chr5:179919000-179920400	Weak transcription	Brain Cingulate Gyrus	brain
21	chr5:179919000-179920600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
22	chr5:179919000-179920800	Weak transcription	Cortex derived primary cultured neurospheres	brain
23	chr5:179919000-179921000	Weak transcription	H1 Cell Line	embryonic stem cell
24	chr5:179919000-179921000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
25	chr5:179919200-179920400	Weak transcription	Primary hematopoietic stem cells	blood
26	chr5:179919400-179920400	Enhancers	Brain Anterior Caudate	brain
27	chr5:179919400-179920600	Enhancers	Placenta	Placenta
28	chr5:179919400-179920800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
29	chr5:179919600-179920600	Weak transcription	H9 Cell Line	embryonic stem cell
30	chr5:179919800-179920400	Bivalent Enhancer	iPS DF 19.11 Cell Line	embryonic stem cell
31	chr5:179919800-179920400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
32	chr5:179919800-179920600	Enhancers	HepG2	liver
33	chr5:179919800-179920800	Enhancers	Fetal Thymus	thymus
34	chr5:179919800-179921400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
35	chr5:179920000-179920400	Enhancers	Primary T killer memory cells from peripheral blood	blood
36	chr5:179920000-179920400	Enhancers	Muscle Satellite Cultured Cells	--
37	chr5:179920000-179920600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
38	chr5:179920000-179920800	Enhancers	Primary B cells from peripheral blood	blood
39	chr5:179920000-179920800	Enhancers	Primary T cells fromperipheralblood	blood
40	chr5:179920000-179920800	Flanking Active TSS	Dnd41	blood
41	chr5:179920000-179921200	Enhancers	Fetal Brain Male	brain
42	chr5:179920200-179920400	Enhancers	Primary T helper naive cells from peripheral blood	blood
43	chr5:179920200-179920400	Enhancers	Primary T helper cells PMA-I stimulated	--
44	chr5:179920200-179920400	Enhancers	Brain Hippocampus Middle	brain
45	chr5:179920200-179920400	Active TSS	Brain Inferior Temporal Lobe	brain
46	chr5:179920200-179920400	Flanking Active TSS	K562	blood
47	chr5:179920200-179920600	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
48	chr5:179920200-179920600	Enhancers	Primary T helper cells fromperipheralblood	blood
49	chr5:179920200-179920600	Enhancers	Primary T killer naive cells fromperipheralblood	blood
50	chr5:179920200-179920600	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin

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