Variant report

Variant	esv3359689
Chromosome Location	chr10:96161587-96164135
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:687)
CpG islands
(count:854)
Chromatin interactive
region (count:18)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:687 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr10:96161938-96162456	HepG2	liver:	n/a	n/a
2	ARID3A	chr10:96163791-96164005	HepG2	liver:	n/a	chr10:96163926-96163942
3	ATF1	chr10:96161937-96162267	K562	blood:	n/a	n/a
4	ATF2	chr10:96161841-96162276	H1-hESC	embryonic stem cell:	n/a	n/a
5	ATF3	chr10:96161816-96162293	A549	lung:	n/a	n/a
6	BACH1	chr10:96161959-96163255	H1-hESC	embryonic stem cell:	n/a	n/a
7	BCL3	chr10:96161717-96162346	A549	lung:	n/a	chr10:96162279-96162292 chr10:96162275-96162288
8	BCL3	chr10:96161704-96162598	A549	lung:	n/a	chr10:96162279-96162292 chr10:96162275-96162288 chr10:96162345-96162358
9	BCLAF1	chr10:96161767-96162712	GM12878	blood:	n/a	chr10:96162279-96162292 chr10:96162275-96162288 chr10:96162345-96162358
10	BCLAF1	chr10:96163071-96163931	GM12878	blood:	n/a	n/a
11	BCLAF1	chr10:96161801-96162945	GM12878	blood:	n/a	chr10:96162279-96162292 chr10:96162275-96162288 chr10:96162345-96162358
12	BHLHE40	chr10:96163367-96163651	K562	blood:	n/a	n/a
13	BHLHE40	chr10:96161878-96163759	GM12878	blood:	n/a	chr10:96162269-96162285
14	BHLHE40	chr10:96161860-96162771	K562	blood:	n/a	chr10:96162269-96162285
15	BHLHE40	chr10:96161931-96162433	HepG2	liver:	n/a	chr10:96162269-96162285
16	BRCA1	chr10:96163594-96164067	Hela-S3	cervix:	n/a	n/a
17	BRCA1	chr10:96161930-96162118	GM12878	blood:	n/a	n/a
18	CBX3	chr10:96161648-96162699	HCT-116	colon:	n/a	n/a
19	CBX3	chr10:96161771-96162241	K562	blood:	n/a	n/a
20	CBX3	chr10:96161727-96162379	K562	blood:	n/a	n/a
21	CCNT2	chr10:96162008-96163594	K562	blood:	n/a	n/a
22	CEBPB	chr10:96163592-96163973	IMR90	lung:	n/a	n/a
23	CEBPB	chr10:96161752-96162087	HepG2	liver:	n/a	n/a
24	CEBPB	chr10:96163115-96164024	ECC-1	luminal epithelium:	n/a	n/a
25	CEBPB	chr10:96163540-96163989	A549	lung:	n/a	n/a
26	CEBPB	chr10:96163599-96163949	HepG2	liver:	n/a	n/a
27	CEBPB	chr10:96163593-96163951	A549	lung:	n/a	n/a
28	CEBPB	chr10:96161853-96162658	Hela-S3	cervix:	n/a	n/a
29	CEBPB	chr10:96163597-96163926	MCF-7	breast:	n/a	n/a
30	CEBPB	chr10:96163600-96163967	K562	blood:	n/a	n/a
31	CEBPB	chr10:96163655-96163933	K562	blood:	n/a	n/a
32	CEBPB	chr10:96161693-96162588	ECC-1	luminal epithelium:	n/a	n/a
33	CEBPB	chr10:96163200-96163986	Hela-S3	cervix:	n/a	n/a
34	CEBPD	chr10:96162024-96162440	HepG2	liver:	n/a	n/a
35	CHD1	chr10:96162753-96162837	H1-hESC	embryonic stem cell:	n/a	n/a
36	CHD1	chr10:96162127-96163963	GM12878	blood:	n/a	n/a
37	CHD1	chr10:96163205-96163467	H1-hESC	embryonic stem cell:	n/a	n/a
38	CHD2	chr10:96162751-96162799	K562	blood:	n/a	n/a
39	CHD2	chr10:96162586-96162957	H1-hESC	embryonic stem cell:	n/a	n/a
40	CHD2	chr10:96163039-96163700	GM12878	blood:	n/a	n/a
41	CHD2	chr10:96161884-96163836	Hela-S3	cervix:	n/a	n/a
42	CHD2	chr10:96161949-96162261	H1-hESC	embryonic stem cell:	n/a	n/a
43	CHD2	chr10:96162018-96162281	HepG2	liver:	n/a	n/a
44	CHD2	chr10:96162486-96162758	HepG2	liver:	n/a	n/a
45	CHD2	chr10:96161910-96162820	GM12878	blood:	n/a	n/a
46	CREB1	chr10:96161934-96162453	ECC-1	luminal epithelium:	n/a	n/a
47	CREB1	chr10:96161849-96162867	A549	lung:	n/a	n/a
48	CREB1	chr10:96161983-96162256	A549	lung:	n/a	n/a
49	CREB1	chr10:96161921-96163009	GM12878	blood:	n/a	n/a
50	CREB1	chr10:96163115-96163632	A549	lung:	n/a	n/a

(count:854 , 50 per page) page: 1 2 3 4 5 6 7 ... 18

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr10:96162146-96162196	HCPEpiC	choroid plexus:	n/a
2	chr10:96162178-96162228	HRPEpiC	eye:	n/a
3	chr10:96162988-96163038	A549	lung:	n/a
4	chr10:96162988-96163038	IMR90	lung:	fetal
5	chr10:96163157-96163207	AG04450	lung:	fetal
6	chr10:96162284-96162334	U87	brain:	n/a
7	chr10:96162178-96162228	HEK293	kidney:	embryo
8	chr10:96162173-96162223	PFSK-1	brain:	n/a
9	chr10:96163371-96163421	IMR90	lung:	fetal
10	chr10:96162178-96162228	SK-N-MC	brain:	n/a
11	chr10:96161916-96161966	NHDF-neo	bronchial:	n/a
12	chr10:96163371-96163421	SK-N-MC	brain:	n/a
13	chr10:96163157-96163207	AoSMC	blood vessel:	n/a
14	chr10:96162173-96162223	Caco-2	colon:	n/a
15	chr10:96162809-96162859	HCT-116	colon:	n/a
16	chr10:96163371-96163421	SK-N-SH	brain:	n/a
17	chr10:96162988-96163038	HRPEpiC	eye:	n/a
18	chr10:96162066-96162116	K562	blood:	n/a
19	chr10:96162173-96162223	RPTEC	kidney:	n/a
20	chr10:96162162-96162212	HNPCEpiC	eye:	n/a
21	chr10:96162189-96162239	CMK	blood:	n/a
22	chr10:96163371-96163421	AG04450	lung:	fetal
23	chr10:96162988-96163038	NH-A	brain:	n/a
24	chr10:96162173-96162223	HMEC	breast:	n/a
25	chr10:96161889-96161939	HRE	kidney:	n/a
26	chr10:96162133-96162183	HEEpiC	esophagus:	n/a
27	chr10:96162809-96162859	HNPCEpiC	eye:	n/a
28	chr10:96162162-96162212	HRPEpiC	eye:	n/a
29	chr10:96162133-96162183	CMK	blood:	n/a
30	chr10:96162146-96162196	ovcar-3	ovarian:	n/a
31	chr10:96162178-96162228	HRCEpiC	kidney:	n/a
32	chr10:96162809-96162859	H1-hESC	embryonic stem cell:	embryo
33	chr10:96161916-96161966	GM06990	blood:	n/a
34	chr10:96162178-96162228	NT2-D1	testis:	n/a
35	chr10:96162988-96163038	HEEpiC	esophagus:	n/a
36	chr10:96163157-96163207	NB4	blood:	n/a
37	chr10:96162173-96162223	HIPEpiC	eye:	n/a
38	chr10:96162066-96162116	HL-60	blood:	n/a
39	chr10:96163157-96163207	BJ	skin:	n/a
40	chr10:96162189-96162239	AG09309	skin:	n/a
41	chr10:96161916-96161966	A549	lung:	n/a
42	chr10:96162146-96162196	HMEC	breast:	n/a
43	chr10:96162178-96162228	LNCaP	prostate:	n/a
44	chr10:96162284-96162334	SKMC	muscle:	n/a
45	chr10:96162284-96162334	Jurkat	blood:	n/a
46	chr10:96162162-96162212	Hepatocyte	liver:	n/a
47	chr10:96163371-96163421	NB4	blood:	n/a
48	chr10:96162162-96162212	AG09319	gingival:	n/a
49	chr10:96162146-96162196	CMK	blood:	n/a
50	chr10:96162133-96162183	AoSMC	blood vessel:	n/a

(count:18 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr10:96162673..96164608-chr10:96201520..96204137,3	MCF-7	breast:
2	chr10:96089068..96091434-chr10:96163469..96165336,2	K562	blood:
3	chr10:96121306..96124383-chr10:96159927..96163798,5	MCF-7	breast:
4	chr10:96119763..96122726-chr10:96163965..96166273,2	MCF-7	breast:
5	chr10:96160448..96164371-chr10:96304138..96307716,8	MCF-7	breast:
6	chr10:96121730..96122942-chr10:96161863..96162614,3	Hela-S3	cervix:
7	chr10:96159758..96162488-chr10:96305268..96307065,2	K562	blood:
8	chr10:96162017..96163519-chr15:65596803..65598979,2	MCF-7	breast:
9	chr10:96162530..96165019-chr10:96199067..96201077,2	MCF-7	breast:
10	chr10:96120934..96124258-chr10:96160439..96165957,6	MCF-7	breast:
11	chr10:96161889..96162635-chr9:88897007..88897760,2	Hela-S3	cervix:
12	chr10:96121005..96123981-chr10:96160609..96162843,2	K562	blood:
13	chr10:96162368..96164918-chr10:96174079..96176855,3	K562	blood:
14	chr10:96162320..96165263-chr10:96165537..96170524,5	K562	blood:
15	chr10:96162891..96164490-chr10:96175616..96177129,2	MCF-7	breast:
16	chr10:96162121..96162677-chr5:154317419..154318125,2	HCT-116	colon:
17	chr10:96162267..96164235-chr10:96185502..96188240,3	MCF-7	breast:
18	chr10:96122660..96124273-chr10:96159058..96162494,4	K562	blood:

No data

Variant related genes	Relation type
TBC1D12	TF binding region
TBC1D12	CpG island
ENSG00000135070	chromatin interactions
ENSG00000173145	chromatin interactions
ENSG00000200156	chromatin interactions
ENSG00000119969	chromatin interactions
ENSG00000082516	chromatin interactions

Extended variants
information (count: 115 )
Associated
traits (count: 70 )

Variant overlapped rSNPs/rCNVs (count:115 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs181596074	chr10:96161613-96161614	Weak transcription Active TSS Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
2	rs186152721	chr10:96161635-96161636	Weak transcription Active TSS Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
3	rs546898021	chr10:96161644-96161645	Weak transcription Active TSS Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
4	rs566762083	chr10:96161693-96161694	Weak transcription Active TSS Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
5	rs191010053	chr10:96161725-96161726	Weak transcription Active TSS Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
6	rs374287019	chr10:96161733-96161734	Weak transcription Active TSS Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
7	rs535102470	chr10:96161747-96161748	Weak transcription Active TSS Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
8	rs182781194	chr10:96161754-96161755	Weak transcription Active TSS Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
9	rs537453141	chr10:96161765-96161766	Weak transcription Active TSS Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
10	rs557689249	chr10:96161771-96161772	Weak transcription Active TSS Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
11	rs577882518	chr10:96161779-96161780	Weak transcription Active TSS Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
12	rs367746193	chr10:96161792-96161793	Weak transcription Active TSS Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
13	rs76706159	chr10:96161801-96161802	Active TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
14	rs557531628	chr10:96161806-96161807	Active TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
15	rs111948088	chr10:96161832-96161833	Active TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
16	rs553766985	chr10:96161861-96161862	Active TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
17	rs573909089	chr10:96161907-96161908	Active TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
18	rs542839429	chr10:96161927-96161928	Active TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
19	rs12773156	chr10:96161971-96161972	Active TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
20	rs562203540	chr10:96161989-96161990	Active TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
21	rs552772114	chr10:96162000-96162001	Active TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
22	rs187727356	chr10:96162004-96162005	Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
23	rs564475459	chr10:96162062-96162063	Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
24	rs533469281	chr10:96162065-96162066	Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
25	rs191398638	chr10:96162069-96162070	Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription	TF binding region CpG island Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
26	rs560412728	chr10:96162075-96162076	Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription	TF binding region CpG island Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
27	rs529487905	chr10:96162151-96162152	Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription	TF binding region CpG island Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
28	rs549126346	chr10:96162191-96162192	Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription	TF binding region CpG island Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
29	rs536775916	chr10:96162213-96162214	Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription	TF binding region CpG island Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
30	rs556534030	chr10:96162219-96162220	Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription	TF binding region CpG island Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
31	rs537919248	chr10:96162231-96162232	Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription	TF binding region CpG island Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
32	rs182777817	chr10:96162241-96162242	Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
33	rs187198222	chr10:96162254-96162255	Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
34	rs112161698	chr10:96162260-96162261	Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
35	rs376037737	chr10:96162265-96162266	Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
36	rs554154479	chr10:96162291-96162292	Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
37	rs192014520	chr10:96162320-96162321	Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
38	rs199804945	chr10:96162342-96162343	Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
39	rs201614754	chr10:96162402-96162403	Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
40	rs375547585	chr10:96162417-96162418	Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
41	rs575668165	chr10:96162426-96162427	Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
42	rs371794719	chr10:96162430-96162431	Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
43	rs200798014	chr10:96162443-96162444	Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
44	rs573344096	chr10:96162453-96162454	Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
45	rs373772939	chr10:96162461-96162462	Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
46	rs371213453	chr10:96162463-96162464	Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
47	rs578007960	chr10:96162496-96162497	Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
48	rs540259659	chr10:96162506-96162507	Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
49	rs560424908	chr10:96162548-96162549	Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
50	rs529499164	chr10:96162592-96162593	Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:70)

Disease	PMID	Source
Gastric cancer	17908304	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	21979893	CNVD
Melanoma	18172304	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Ewing''s sarcoma	17952124	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	20724749	CNVD
Autism	22495311	CNVD
Prostate cancer	18632612	CNVD
Cockayne syndrome	18421352	CNVD
Glioblastoma	16823260	CNVD
Medulloblastoma	16968546	CNVD
Neuroblastoma	17533364	CNVD
Squamous cell cancer	21044232	CNVD
Glioma	21971842	CNVD
Cancer	21637783	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Colorectal cancer	20709793	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Lung cancer	18438408	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Usher syndrome	20538994	CNVD
Medulloblastoma	16783165	CNVD
Breast cancer	21785460	CNVD
Acute myeloid leukemia	20729466	CNVD
Prostate cancer	16573809	CNVD
Paraganglioma	17535989	CNVD
Submicroscopic aberration syndrome	21292638	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Pulmonary chondroma	17535989	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Colorectal cancer	18645599	CNVD
Polyposis syndrome	18645599	CNVD
Prostate cancer	17245344	CNVD
Glioblastoma multiforme	17369134	CNVD
Glioblastoma multiforme	21750150	CNVD
Breast cancer	22032731	CNVD
Ovarian cancer	20844748	CNVD
Glioblastoma multiforme	17002787	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Glioblastoma multiforme	17387387	CNVD
Breast cancer	21364760	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Wilms tumour	21544195	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Urothelial carcinoma	21177765	CNVD
Breast cancer	16397240	CNVD
Chronic lymphocytic leukemia	21049055	CNVD
Cervical cancer	21062161	CNVD
Non-small cell lung cancer	21829676	CNVD
Melanoma	24453001	CNVD
Breast cancer	16608533	CNVD
Intracranial aneurysm	16715129	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	22286061	CNVD
Pancreatic cancer	17952125	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:328 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:96155800-96161800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr10:96155800-96162000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr10:96157800-96161800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr10:96157800-96161800	Weak transcription	NH-A	brain
5	chr10:96157800-96161800	Weak transcription	NHEK	skin
6	chr10:96158000-96161800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr10:96158200-96161600	Weak transcription	Hela-S3	cervix
8	chr10:96158200-96161800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
9	chr10:96158200-96161800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
10	chr10:96158200-96161800	Weak transcription	A549	lung
11	chr10:96158200-96161800	Weak transcription	HepG2	liver
12	chr10:96158200-96161800	Weak transcription	HSMMtube	muscle
13	chr10:96158200-96161800	Weak transcription	K562	blood
14	chr10:96158400-96161800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
15	chr10:96158600-96161800	Weak transcription	Muscle Satellite Cultured Cells	--
16	chr10:96158800-96161800	Weak transcription	HSMM	muscle
17	chr10:96161200-96162400	Active TSS	Fetal Brain Male	brain
18	chr10:96161200-96164000	Active TSS	Placenta	Placenta
19	chr10:96161400-96162000	Flanking Bivalent TSS/Enh	Monocytes-CD14+_RO01746	blood
20	chr10:96161600-96161800	Bivalent Enhancer	Primary monocytes fromperipheralblood	blood
21	chr10:96161600-96161800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
22	chr10:96161600-96161800	Bivalent/Poised TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
23	chr10:96161600-96163800	Active TSS	Rectal Mucosa Donor 29	rectum
24	chr10:96161600-96164200	Active TSS	Brain Inferior Temporal Lobe	brain
25	chr10:96161600-96164600	Active TSS	Rectal Smooth Muscle	rectum
26	chr10:96161600-96164800	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
27	chr10:96161600-96164800	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
28	chr10:96161600-96164800	Active TSS	Stomach Smooth Muscle	stomach
29	chr10:96161600-96164800	Active TSS	Hela-S3	cervix
30	chr10:96161600-96165000	Active TSS	Brain Anterior Caudate	brain
31	chr10:96161600-96165000	Active TSS	Fetal Intestine Large	intestine
32	chr10:96161600-96165400	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
33	chr10:96161800-96162000	Flanking Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
34	chr10:96161800-96162000	Flanking Bivalent TSS/Enh	iPS-15b Cell Line	embryonic stem cell
35	chr10:96161800-96162000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
36	chr10:96161800-96162000	Flanking Bivalent TSS/Enh	Primary B cells from peripheral blood	blood
37	chr10:96161800-96162000	Flanking Active TSS	Primary hematopoietic stem cells	blood
38	chr10:96161800-96162000	Bivalent Enhancer	Primary T helper cells fromperipheralblood	blood
39	chr10:96161800-96162000	Flanking Active TSS	Muscle Satellite Cultured Cells	--
40	chr10:96161800-96162000	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
41	chr10:96161800-96162000	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
42	chr10:96161800-96162000	Flanking Active TSS	Fetal Adrenal Gland	Adrenal Gland
43	chr10:96161800-96162000	Flanking Active TSS	Fetal Brain Female	brain
44	chr10:96161800-96162000	Enhancers	Fetal Heart	heart
45	chr10:96161800-96162000	Flanking Active TSS	Fetal Intestine Small	intestine
46	chr10:96161800-96162000	Flanking Active TSS	Fetal Muscle Leg	muscle
47	chr10:96161800-96162000	Flanking Active TSS	Lung	lung
48	chr10:96161800-96162000	Enhancers	Placenta Amnion	Placenta Amnion
49	chr10:96161800-96162000	Flanking Active TSS	Right Ventricle	heart
50	chr10:96161800-96162000	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle

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