Variant report

Variant	esv3359935
Chromosome Location	chr3:48696498-48699296
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:338)
CpG islands
(count:793)
Chromatin interactive
region (count:24)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:338 , 50 per page) page: 1 2 3 4 5 6 7

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr3:48699155-48699487	HepG2	liver:	n/a	n/a
2	ATF2	chr3:48699005-48699484	H1-hESC	embryonic stem cell:	n/a	n/a
3	ATF2	chr3:48699029-48699495	GM12878	blood:	n/a	n/a
4	ATF2	chr3:48699086-48699504	H1-hESC	embryonic stem cell:	n/a	n/a
5	BACH1	chr3:48699217-48699288	K562	blood:	n/a	n/a
6	BATF	chr3:48699166-48699374	GM12878	blood:	n/a	n/a
7	BCLAF1	chr3:48699066-48699452	GM12878	blood:	n/a	n/a
8	BHLHE40	chr3:48699134-48699469	K562	blood:	n/a	n/a
9	BHLHE40	chr3:48699110-48699482	GM12878	blood:	n/a	n/a
10	CBX3	chr3:48698904-48699488	K562	blood:	n/a	n/a
11	CBX3	chr3:48699154-48699414	K562	blood:	n/a	n/a
12	CCNT2	chr3:48698523-48698566	K562	blood:	n/a	n/a
13	CCNT2	chr3:48699109-48699466	K562	blood:	n/a	n/a
14	CEBPB	chr3:48698992-48698999	H1-hESC	embryonic stem cell:	n/a	n/a
15	CHD1	chr3:48698915-48699304	H1-hESC	embryonic stem cell:	n/a	n/a
16	CHD1	chr3:48699127-48699435	GM12878	blood:	n/a	n/a
17	CHD2	chr3:48699132-48699580	HepG2	liver:	n/a	n/a
18	CHD2	chr3:48699126-48699459	GM12878	blood:	n/a	n/a
19	CHD2	chr3:48699103-48699431	K562	blood:	n/a	n/a
20	CHD2	chr3:48699139-48699462	H1-hESC	embryonic stem cell:	n/a	n/a
21	CREB1	chr3:48699153-48699449	A549	lung:	n/a	n/a
22	CREB1	chr3:48698992-48699510	H1-hESC	embryonic stem cell:	n/a	n/a
23	CREB1	chr3:48699193-48699348	A549	lung:	n/a	n/a
24	CTCF	chr3:48698940-48699090	HUVEC	blood vessel:	n/a	n/a
25	CTCF	chr3:48696892-48696911	Kidney_OC	kidney:	n/a	n/a
26	CTCF	chr3:48699265-48699322	GM12878	blood:	n/a	n/a
27	CTCF	chr3:48699080-48699230	SAEC	small airway:	n/a	n/a
28	CTCF	chr3:48699020-48699170	GM12871	blood:	n/a	n/a
29	CTCF	chr3:48699179-48699355	Spleen_OC	spleen:	n/a	n/a
30	E2F6	chr3:48698883-48699034	K562	blood:	n/a	n/a
31	E2F6	chr3:48699130-48699374	K562	blood:	n/a	n/a
32	EBF1	chr3:48699099-48699338	GM12878	blood:	n/a	n/a
33	EBF1	chr3:48699029-48699307	GM12878	blood:	n/a	n/a
34	EBF1	chr3:48698997-48699317	GM12878	blood:	n/a	n/a
35	ELF1	chr3:48699094-48699370	K562	blood:	n/a	n/a
36	ELF1	chr3:48699067-48699470	GM12878	blood:	n/a	n/a
37	ELF1	chr3:48698957-48699495	K562	blood:	n/a	n/a
38	ELF1	chr3:48698877-48699851	GM12878	blood:	n/a	n/a
39	ELF1	chr3:48699122-48699459	HepG2	liver:	n/a	n/a
40	ELF1	chr3:48699088-48699463	HepG2	liver:	n/a	n/a
41	ELK1	chr3:48699167-48699353	K562	blood:	n/a	n/a
42	EP300	chr3:48699146-48699409	HepG2	liver:	n/a	n/a
43	ETS1	chr3:48699071-48699439	GM12878	blood:	n/a	n/a
44	ETS1	chr3:48698965-48699444	K562	blood:	n/a	n/a
45	ETS1	chr3:48699056-48699516	GM12878	blood:	n/a	n/a
46	ETS1	chr3:48699021-48699500	K562	blood:	n/a	n/a
47	FOSL2	chr3:48699031-48699516	HepG2	liver:	n/a	n/a
48	FOXM1	chr3:48699087-48699479	GM12878	blood:	n/a	n/a
49	GABPA	chr3:48699110-48699392	HepG2	liver:	n/a	n/a
50	GABPA	chr3:48698806-48699423	H1-hESC	embryonic stem cell:	n/a	n/a

(count:793 , 50 per page) page: 1 2 3 4 5 6 7 ... 16

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:48699012-48699062	SK-N-MC	brain:	n/a
2	chr3:48697823-48697873	AG04450	lung:	fetal
3	chr3:48699090-48699140	HRCEpiC	kidney:	n/a
4	chr3:48697504-48697554	GM12891	blood:	n/a
5	chr3:48698558-48698608	AG09319	gingival:	n/a
6	chr3:48697823-48697873	ProgFib	skin:	n/a
7	chr3:48699012-48699062	BJ	skin:	n/a
8	chr3:48697682-48697732	SAEC	small airway:	n/a
9	chr3:48697500-48697550	PANC-1	pancreas:	n/a
10	chr3:48697823-48697873	GM19239	blood:	n/a
11	chr3:48697504-48697554	SK-N-MC	brain:	n/a
12	chr3:48698519-48698569	CMK	blood:	n/a
13	chr3:48697456-48697506	SK-N-SH	brain:	n/a
14	chr3:48699012-48699062	Jurkat	blood:	n/a
15	chr3:48697682-48697732	SK-N-SH	brain:	n/a
16	chr3:48697504-48697554	AG10803	skin:	n/a
17	chr3:48699012-48699062	U87	brain:	n/a
18	chr3:48697594-48697644	MCF-7	breast:	n/a
19	chr3:48698519-48698569	SK-N-SH	brain:	n/a
20	chr3:48698558-48698608	PANC-1	pancreas:	n/a
21	chr3:48697456-48697506	GM19239	blood:	n/a
22	chr3:48697823-48697873	LNCaP	prostate:	n/a
23	chr3:48697504-48697554	HRPEpiC	eye:	n/a
24	chr3:48699090-48699140	SK-N-MC	brain:	n/a
25	chr3:48697500-48697550	AG09309	skin:	n/a
26	chr3:48699090-48699140	HEEpiC	esophagus:	n/a
27	chr3:48697500-48697550	U87	brain:	n/a
28	chr3:48699012-48699062	HRE	kidney:	n/a
29	chr3:48697682-48697732	HCM	heart:	n/a
30	chr3:48696613-48696663	RPTEC	kidney:	n/a
31	chr3:48699012-48699062	HMEC	breast:	n/a
32	chr3:48697823-48697873	AG04449	skin:	fetal
33	chr3:48698558-48698608	ECC-1	luminal epithelium:	n/a
34	chr3:48698519-48698569	HL-60	blood:	n/a
35	chr3:48699090-48699140	AG09309	skin:	n/a
36	chr3:48697561-48697611	NT2-D1	testis:	n/a
37	chr3:48696613-48696663	SK-N-SH_RA	brain:	n/a
38	chr3:48696613-48696663	HMEC	breast:	n/a
39	chr3:48697682-48697732	ECC-1	luminal epithelium:	n/a
40	chr3:48697823-48697873	U87	brain:	n/a
41	chr3:48697456-48697506	HCT-116	colon:	n/a
42	chr3:48697504-48697554	HUVEC	blood vessel:	n/a
43	chr3:48697594-48697644	GM19239	blood:	n/a
44	chr3:48697500-48697550	HIPEpiC	eye:	n/a
45	chr3:48697456-48697506	SAEC	small airway:	n/a
46	chr3:48697823-48697873	NT2-D1	testis:	n/a
47	chr3:48697561-48697611	AG09309	skin:	n/a
48	chr3:48697500-48697550	HRE	kidney:	n/a
49	chr3:48697594-48697644	HepG2	liver:	n/a
50	chr3:48698558-48698608	HEK293	kidney:	embryo

(count:24 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr3:48686566..48688475-chr3:48697453..48700260,2	MCF-7	breast:
2	chr3:48667529..48675453-chr3:48697968..48703139,10	MCF-7	breast:
3	chr3:48678686..48681268-chr3:48696483..48698297,2	K562	blood:
4	chr3:48593030..48597118-chr3:48698507..48702121,6	MCF-7	breast:
5	chr3:48697809..48699544-chr3:49049957..49052349,2	MCF-7	breast:
6	chr3:48695950..48699824-chr3:48710158..48713070,3	K562	blood:
7	chr3:48686766..48690063-chr3:48696074..48699163,3	MCF-7	breast:
8	chr3:48698738..48703197-chr3:48713751..48717809,8	K562	blood:
9	chr3:48670997..48674874-chr3:48698947..48702118,7	MCF-7	breast:
10	chr3:48699257..48701574-chr3:49057854..49059590,2	K562	blood:
11	chr3:48616186..48618444-chr3:48693740..48696673,2	MCF-7	breast:
12	chr3:48659070..48661619-chr3:48697247..48699239,2	K562	blood:
13	chr3:48678686..48683466-chr3:48696483..48700259,5	K562	blood:
14	chr3:48647141..48648853-chr3:48697785..48700969,3	MCF-7	breast:
15	chr3:48675163..48677992-chr3:48697938..48699928,2	K562	blood:
16	chr3:48699225..48701604-chr3:48731929..48734312,2	MCF-7	breast:
17	chr3:48678987..48680520-chr3:48698680..48701564,2	K562	blood:
18	chr3:48670764..48674544-chr3:48698929..48702803,9	K562	blood:
19	chr3:48682961..48685623-chr3:48693830..48696752,2	MCF-7	breast:
20	chr3:48670764..48674544-chr3:48699167..48702803,6	K562	blood:
21	chr3:48698129..48704726-chr3:48706101..48715056,13	MCF-7	breast:
22	chr3:48602276..48604378-chr3:48697664..48699278,2	K562	blood:
23	chr3:48698197..48700148-chr3:48700175..48701734,2	MCF-7	breast:
24	chr3:48698351..48700757-chr3:49057854..49060697,2	K562	blood:

No data

Variant related genes	Relation type
ENSG00000228350	TF binding region
ENSG00000228350	CpG island
ENSG00000228350	chromatin interactions
ENSG00000178149	chromatin interactions
ENSG00000068745	chromatin interactions
ENSG00000225697	chromatin interactions
ENSG00000010256	chromatin interactions
ENSG00000271973	chromatin interactions
ENSG00000207605	chromatin interactions
ENSG00000178252	chromatin interactions
ENSG00000178057	chromatin interactions
ENSG00000114270	chromatin interactions
ENSG00000183396	chromatin interactions
ENSG00000213672	chromatin interactions
ENSG00000008300	chromatin interactions
ENSG00000263898	chromatin interactions
ENSG00000114268	chromatin interactions
ENSG00000211535	chromatin interactions

Extended variants
information (count: 152 )
Associated
traits (count: 102 )

Variant overlapped rSNPs/rCNVs (count:152 , 50 per page) page: 1 2 3 4

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs145165696	chr3:48696501-48696502	Strong transcription Weak transcription ZNF genes & repeats Active TSS Genic enhancers Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
2	rs141289150	chr3:48696502-48696503	Strong transcription Weak transcription ZNF genes & repeats Active TSS Genic enhancers Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
3	rs375978730	chr3:48696504-48696505	Strong transcription Weak transcription ZNF genes & repeats Active TSS Genic enhancers Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
4	rs377492896	chr3:48696516-48696517	Strong transcription Weak transcription ZNF genes & repeats Active TSS Genic enhancers Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
5	rs140341250	chr3:48696520-48696521	Strong transcription Weak transcription ZNF genes & repeats Active TSS Genic enhancers Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
6	rs150368002	chr3:48696521-48696522	Strong transcription Weak transcription ZNF genes & repeats Active TSS Genic enhancers Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
7	rs61729234	chr3:48696595-48696596	Strong transcription Weak transcription ZNF genes & repeats Active TSS Genic enhancers Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
8	rs549604301	chr3:48696599-48696600	Strong transcription Weak transcription ZNF genes & repeats Active TSS Genic enhancers Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
9	rs555469309	chr3:48696612-48696613	Strong transcription Weak transcription ZNF genes & repeats Active TSS Genic enhancers Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
10	rs370982426	chr3:48696626-48696627	Strong transcription Weak transcription ZNF genes & repeats Active TSS Genic enhancers Enhancers	TF binding region CpG island Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
11	rs142750981	chr3:48696647-48696648	Strong transcription Weak transcription ZNF genes & repeats Active TSS Genic enhancers Enhancers	TF binding region CpG island Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
12	rs200128579	chr3:48696693-48696694	Strong transcription Weak transcription ZNF genes & repeats Active TSS Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
13	rs139204064	chr3:48696711-48696712	Strong transcription Weak transcription ZNF genes & repeats Active TSS Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
14	rs149132560	chr3:48696750-48696751	Strong transcription Weak transcription ZNF genes & repeats Active TSS Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
15	rs139398757	chr3:48696759-48696760	Strong transcription Weak transcription ZNF genes & repeats Active TSS Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
16	rs562942219	chr3:48696764-48696765	Strong transcription Weak transcription ZNF genes & repeats Active TSS Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
17	rs144228630	chr3:48696782-48696783	Strong transcription Weak transcription ZNF genes & repeats Active TSS Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
18	rs146821839	chr3:48696783-48696784	Strong transcription Weak transcription ZNF genes & repeats Active TSS Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
19	rs368443183	chr3:48696844-48696845	Strong transcription ZNF genes & repeats Weak transcription Active TSS Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
20	rs113758046	chr3:48696864-48696865	Strong transcription ZNF genes & repeats Weak transcription Active TSS Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
21	rs568196050	chr3:48696885-48696886	Strong transcription ZNF genes & repeats Weak transcription Active TSS Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
22	rs371910872	chr3:48696899-48696900	Strong transcription ZNF genes & repeats Weak transcription Active TSS Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
23	rs141542652	chr3:48696906-48696907	Strong transcription ZNF genes & repeats Weak transcription Active TSS Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
24	rs202029103	chr3:48696925-48696926	Strong transcription ZNF genes & repeats Weak transcription Active TSS Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
25	rs560173014	chr3:48696926-48696927	Strong transcription ZNF genes & repeats Weak transcription Active TSS Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
26	rs201106333	chr3:48696968-48696969	Strong transcription ZNF genes & repeats Weak transcription Active TSS Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
27	rs3733089	chr3:48696978-48696979	Strong transcription ZNF genes & repeats Weak transcription Active TSS Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
28	rs375268987	chr3:48696997-48696998	Strong transcription ZNF genes & repeats Weak transcription Active TSS Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
29	rs561081554	chr3:48696998-48696999	Strong transcription ZNF genes & repeats Weak transcription Active TSS Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
30	rs142606355	chr3:48697009-48697010	Strong transcription ZNF genes & repeats Weak transcription Active TSS Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
31	rs369332360	chr3:48697010-48697011	Strong transcription ZNF genes & repeats Weak transcription Active TSS Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
32	rs200527549	chr3:48697034-48697035	Strong transcription ZNF genes & repeats Weak transcription Active TSS Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
33	rs552297183	chr3:48697048-48697049	Strong transcription ZNF genes & repeats Weak transcription Active TSS Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
34	rs267599863	chr3:48697051-48697052	Strong transcription ZNF genes & repeats Weak transcription Active TSS Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
35	rs201972487	chr3:48697071-48697072	Strong transcription ZNF genes & repeats Weak transcription Active TSS Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
36	rs531319649	chr3:48697085-48697086	Strong transcription ZNF genes & repeats Weak transcription Active TSS Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
37	rs376152981	chr3:48697105-48697106	Strong transcription ZNF genes & repeats Weak transcription Active TSS Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
38	rs372656162	chr3:48697106-48697107	Strong transcription ZNF genes & repeats Weak transcription Active TSS Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
39	rs558571872	chr3:48697117-48697118	Strong transcription ZNF genes & repeats Weak transcription Active TSS Genic enhancers Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
40	rs140878382	chr3:48697148-48697149	Strong transcription ZNF genes & repeats Weak transcription Active TSS Genic enhancers Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
41	rs532404008	chr3:48697176-48697177	Strong transcription ZNF genes & repeats Weak transcription Active TSS Genic enhancers Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
42	rs61729374	chr3:48697200-48697201	Strong transcription ZNF genes & repeats Weak transcription Active TSS Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
43	rs141137665	chr3:48697268-48697269	Strong transcription ZNF genes & repeats Weak transcription Active TSS Genic enhancers Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
44	rs200302496	chr3:48697293-48697294	Strong transcription ZNF genes & repeats Weak transcription Active TSS Genic enhancers Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
45	rs375770841	chr3:48697317-48697318	Strong transcription ZNF genes & repeats Weak transcription Active TSS Genic enhancers Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
46	rs368760989	chr3:48697322-48697323	Strong transcription ZNF genes & repeats Weak transcription Active TSS Genic enhancers Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
47	rs138035000	chr3:48697329-48697330	Strong transcription ZNF genes & repeats Weak transcription Active TSS Genic enhancers Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
48	rs201047576	chr3:48697354-48697355	Strong transcription ZNF genes & repeats Weak transcription Active TSS Genic enhancers Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
49	rs201230994	chr3:48697409-48697410	Strong transcription ZNF genes & repeats Weak transcription Active TSS Genic enhancers Enhancers	TF binding region CpG island Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
50	rs73830470	chr3:48697410-48697411	Strong transcription ZNF genes & repeats Weak transcription Active TSS Genic enhancers Enhancers	TF binding region CpG island Chromatin interactive region	4 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a

Variant related diseases (count:102)

Disease	PMID	Source
Lynch syndrome	18415027	CNVD
Renal cell carcinoma	18592004	CNVD
Acute myeloid leukemia	20729466	CNVD
Urothelial carcinoma	18382360	CNVD
Melanoma	18172304	CNVD
Cervical cancer	21062161	CNVD
Hirschsprung''s Disease	21712996	CNVD
Glioblastoma multiforme	21080181	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Insulin resistance	16721378	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	21484798	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Oral cancer	19627613	CNVD
Renal cell carcinoma	19461508	CNVD
Epithelial cancer	22065749	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Acute myeloid leukemia	16864856	CNVD
Liposarcoma	21253554	CNVD
Basal cell lymphoma	21115979	CNVD
Endometrial cancer	22040021	CNVD
Pancreatic endocrine tumor	20981439	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Oral cancer	21386901	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Retinoblastoma	21504564	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Renal cell carcinoma	21668985	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Thoracic aortic aneurysm	21092924	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	17603634	CNVD
Esophageal cancer	20955586	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Breast cancer	17133270	CNVD
Uveal melanoma	20484589	CNVD
Autism	22495311	CNVD
Melanoma	20688739	CNVD
Acute myeloid leukemia	21251322	CNVD
Hepatocellular carcinoma	16750200	CNVD
Cancer	21183584	CNVD
Kartagener syndrome	16639409	CNVD
Biliary cancer	19435499	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Bipolar disorder	20877625	CNVD
Bipolar disorder	21956041	CNVD
Bipolar disorder	22241247	CNVD
Biliary cancer	18923514	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	16397240	CNVD
Breast cancer	22032731	CNVD
Non-small cell lung cancer	20864512	CNVD
Colorectal cancer	16912164	CNVD
Non-small cell lung cancer	19010865	CNVD
Colorectal cancer	16272173	CNVD
Non-muscle invasive bladder neoplasm	19445696	CNVD
Acute myeloid leukemia	17268525	CNVD
Salivary gland tumor	18059337	CNVD
Gastric cancer	16891809	CNVD
Night blindness	17160897	CNVD
Cancer	17160897	CNVD
Breast cancer	20409316	CNVD
Lung cancer	17297452	CNVD
Multiple myeloma	16616336	CNVD
Effusion lymphoma	18079361	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Neuroblastoma	20406844	CNVD
Breast cancer	21785460	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	21045282	CNVD
Urothelial cell carcinoma	18451213	CNVD
Neuroblastoma	17327916	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Melanoma	17363583	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Medullary thyroid carcinoma	18765511	CNVD
abnormal development	18461090	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Developmental delay	21147756	CNVD
Urothelial carcinoma	21177765	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:329 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:48675000-48697200	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr3:48693400-48696800	Enhancers	Fetal Brain Male	brain
3	chr3:48694000-48698800	Weak transcription	Pancreatic Islets	Pancreatic Islet
4	chr3:48694200-48696800	Weak transcription	A549	lung
5	chr3:48694200-48698400	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
6	chr3:48694200-48698600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
7	chr3:48694200-48698600	Weak transcription	Placenta Amnion	Placenta Amnion
8	chr3:48694200-48698600	Weak transcription	HSMMtube	muscle
9	chr3:48694200-48699000	ZNF genes & repeats	H9 Derived Neuron Cultured Cells	ES cell derived
10	chr3:48694400-48696800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
11	chr3:48694400-48697400	Weak transcription	Brain Hippocampus Middle	brain
12	chr3:48694400-48698200	Strong transcription	Cortex derived primary cultured neurospheres	brain
13	chr3:48694400-48698600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
14	chr3:48694400-48698600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
15	chr3:48694400-48698800	Weak transcription	H9 Cell Line	embryonic stem cell
16	chr3:48694400-48698800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
17	chr3:48694400-48698800	Weak transcription	Muscle Satellite Cultured Cells	--
18	chr3:48694400-48698800	Weak transcription	HUVEC	blood vessel
19	chr3:48694600-48698800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
20	chr3:48694600-48698800	Weak transcription	Brain Substantia Nigra	brain
21	chr3:48694800-48696600	Weak transcription	HUES6 Cell Line	embryonic stem cell
22	chr3:48694800-48696800	Weak transcription	Lung	lung
23	chr3:48694800-48697400	Weak transcription	Esophagus	oesophagus
24	chr3:48694800-48697600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
25	chr3:48694800-48698600	Weak transcription	Left Ventricle	heart
26	chr3:48694800-48698800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
27	chr3:48694800-48698800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
28	chr3:48694800-48698800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
29	chr3:48695000-48696800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
30	chr3:48695000-48696800	Weak transcription	Spleen	Spleen
31	chr3:48695000-48698200	Weak transcription	Pancreas	Pancrea
32	chr3:48695000-48698200	Weak transcription	Right Ventricle	heart
33	chr3:48695000-48698800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
34	chr3:48695400-48698600	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
35	chr3:48695600-48698000	Genic enhancers	Brain Germinal Matrix	brain
36	chr3:48695600-48698200	Strong transcription	iPS-18 Cell Line	embryonic stem cell
37	chr3:48695600-48698400	Strong transcription	HUES64 Cell Line	embryonic stem cell
38	chr3:48695600-48698400	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
39	chr3:48695800-48698000	Strong transcription	Brain Anterior Caudate	brain
40	chr3:48695800-48698200	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
41	chr3:48695800-48698400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
42	chr3:48695800-48698400	Strong transcription	Brain Cingulate Gyrus	brain
43	chr3:48696200-48697800	Strong transcription	Brain Inferior Temporal Lobe	brain
44	chr3:48696200-48698400	Strong transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
45	chr3:48696200-48698400	Strong transcription	Brain Dorsolateral Prefrontal Cortex	brain
46	chr3:48696200-48698600	Strong transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
47	chr3:48696200-48698800	Strong transcription	H1 Cell Line	embryonic stem cell
48	chr3:48696400-48697400	Strong transcription	Fetal Brain Female	brain
49	chr3:48696400-48697600	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
50	chr3:48696400-48697600	Strong transcription	Brain Angular Gyrus	brain

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