No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs146872932 |
chr10:5930979-5930980 |
Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs75887320 |
chr10:5930986-5930987 |
Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs199918753 |
chr10:5930999-5931000 |
Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs148317727 |
chr10:5931011-5931012 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs375597526 |
chr10:5931026-5931027 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs369565697 |
chr10:5931033-5931034 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs368134353 |
chr10:5931037-5931038 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs372526816 |
chr10:5931038-5931039 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs548256145 |
chr10:5931040-5931041 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs141477133 |
chr10:5931041-5931042 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs116345232 |
chr10:5931134-5931135 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs138291670 |
chr10:5931158-5931159 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs143874225 |
chr10:5931164-5931165 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs577386197 |
chr10:5931184-5931185 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs375219358 |
chr10:5931198-5931199 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs147314702 |
chr10:5931200-5931201 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs202185769 |
chr10:5931209-5931210 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs553174934 |
chr10:5931213-5931214 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs369543649 |
chr10:5931215-5931216 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs112569010 |
chr10:5931218-5931219 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs3750659 |
chr10:5931230-5931231 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
22 |
rs541818307 |
chr10:5931305-5931306 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs563352325 |
chr10:5931339-5931340 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs192437556 |
chr10:5931348-5931349 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs543376199 |
chr10:5931381-5931382 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs565214354 |
chr10:5931392-5931393 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs183765907 |
chr10:5931423-5931424 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs59772576 |
chr10:5931468-5931469 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs560672441 |
chr10:5931521-5931522 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs562860237 |
chr10:5931586-5931587 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs547611806 |
chr10:5931600-5931601 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs559491121 |
chr10:5931604-5931605 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs529819712 |
chr10:5931637-5931638 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs548164965 |
chr10:5931641-5931642 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs115355428 |
chr10:5931656-5931657 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs569682714 |
chr10:5931673-5931674 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs537719191 |
chr10:5931693-5931694 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs375978123 |
chr10:5931739-5931740 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs572269472 |
chr10:5931783-5931784 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs571156665 |
chr10:5931789-5931790 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs534896779 |
chr10:5931849-5931850 |
Weak transcription Active TSS Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs553576700 |
chr10:5931869-5931870 |
Weak transcription Active TSS Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs568175490 |
chr10:5931874-5931875 |
Weak transcription Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs535569402 |
chr10:5931877-5931878 |
Weak transcription Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs373037352 |
chr10:5931911-5931912 |
Weak transcription Active TSS Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs116838509 |
chr10:5931939-5931940 |
Weak transcription Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs575212860 |
chr10:5931963-5931964 |
Weak transcription Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs546215804 |
chr10:5932018-5932019 |
Weak transcription Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs367737877 |
chr10:5932066-5932067 |
Weak transcription Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs577118836 |
chr10:5932090-5932091 |
Weak transcription Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|