Variant report

Variant	esv3360950
Chromosome Location	chr9:25676977-25679525
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:300)
CpG islands
(count:366)
Chromatin interactive
region (count:9)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:300 , 50 per page) page: 1 2 3 4 5 6

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BACH1	chr9:25678147-25678745	H1-hESC	embryonic stem cell:	n/a	n/a
2	BACH1	chr9:25677405-25677839	H1-hESC	embryonic stem cell:	n/a	n/a
3	BRCA1	chr9:25678407-25679312	Hela-S3	cervix:	n/a	n/a
4	CEBPB	chr9:25678176-25678775	Hela-S3	cervix:	n/a	n/a
5	CHD2	chr9:25677459-25678649	H1-hESC	embryonic stem cell:	n/a	n/a
6	CHD2	chr9:25677326-25678785	Hela-S3	cervix:	n/a	n/a
7	CREB1	chr9:25677450-25677708	A549	lung:	n/a	n/a
8	CTCF	chr9:25678520-25678670	NHEK	skin:	n/a	n/a
9	CTCF	chr9:25678235-25678346	MCF-7	breast:	n/a	n/a
10	CTCF	chr9:25678484-25678657	MCF-7	breast:	n/a	n/a
11	CTCF	chr9:25678440-25678590	HBMEC	blood vessel:	n/a	n/a
12	CTCF	chr9:25678440-25678590	SK-N-SH_RA	brain:	n/a	n/a
13	CTCF	chr9:25677480-25677630	HRE	kidney:	n/a	n/a
14	CTCF	chr9:25678460-25678610	HEK293	kidney:	n/a	n/a
15	CTCF	chr9:25678620-25678770	NHDF-neo	bronchial:	n/a	n/a
16	CTCF	chr9:25678520-25678670	NHDF-neo	bronchial:	n/a	n/a
17	CTCF	chr9:25678455-25678539	ProgFib	skin:	n/a	n/a
18	CTCF	chr9:25678483-25678670	NHEK	skin:	n/a	n/a
19	CTCF	chr9:25678460-25678610	AG09319	gingival:	n/a	n/a
20	CTCF	chr9:25678500-25678650	HMEC	breast:	n/a	n/a
21	CTCF	chr9:25677498-25677502	A549	lung:	n/a	n/a
22	CTCF	chr9:25678500-25678650	HCFaa	heart:	n/a	n/a
23	CTCF	chr9:25678620-25678770	AG10803	skin:	n/a	n/a
24	CTCF	chr9:25678220-25678370	HCPEpiC	choroid plexus:	n/a	n/a
25	CTCF	chr9:25678200-25678350	AoAF	blood vessel:	n/a	n/a
26	CTCF	chr9:25678222-25678305	H1-hESC	embryonic stem cell:	n/a	n/a
27	CTCF	chr9:25678180-25678330	HUVEC	blood vessel:	n/a	n/a
28	CTCF	chr9:25678500-25678650	BJ	skin:	n/a	n/a
29	CTCF	chr9:25678242-25678341	Lung_OC	lung:	n/a	n/a
30	CTCF	chr9:25678500-25678650	RPTEC	kidney:	n/a	n/a
31	CTCF	chr9:25678440-25678590	BJ	skin:	n/a	n/a
32	CTCF	chr9:25678180-25678330	AoAF	blood vessel:	n/a	n/a
33	CTCF	chr9:25679260-25679410	AG09319	gingival:	n/a	n/a
34	CTCF	chr9:25678469-25678550	Fibrobl	skin:	n/a	n/a
35	CTCF	chr9:25678480-25678630	SAEC	small airway:	n/a	n/a
36	CTCF	chr9:25678220-25678370	NHEK	skin:	n/a	n/a
37	CTCF	chr9:25678251-25678346	A549	lung:	n/a	n/a
38	CTCF	chr9:25677505-25677592	Lung_OC	lung:	n/a	n/a
39	CTCF	chr9:25678300-25678450	HRPEpiC	eye:	n/a	chr9:25678431-25678444
40	CTCF	chr9:25678460-25678610	HUVEC	blood vessel:	n/a	n/a
41	CTCF	chr9:25678520-25678670	AG04449	skin:	n/a	n/a
42	CTCF	chr9:25678247-25678364	MCF-7	breast:	n/a	n/a
43	CTCF	chr9:25678216-25678303	Pancreas_OC	pancreas:	n/a	n/a
44	CTCF	chr9:25678460-25678610	BE2_C	brain:	n/a	n/a
45	CTCF	chr9:25678620-25678770	HEEpiC	esophagus:	n/a	n/a
46	CTCF	chr9:25678400-25678550	HPAF	blood vessel:	n/a	chr9:25678431-25678444
47	CTCF	chr9:25677453-25677545	MCF-7	breast:	n/a	n/a
48	CTCF	chr9:25678482-25678578	MCF-7	breast:	n/a	n/a
49	CTCF	chr9:25678580-25678730	HRE	kidney:	n/a	n/a
50	CTCF	chr9:25678252-25678345	MCF-7	breast:	n/a	n/a

(count:366 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:25677628-25677678	A549	lung:	n/a
2	chr9:25678683-25678733	GM12891	blood:	n/a
3	chr9:25677495-25677545	NT2-D1	testis:	n/a
4	chr9:25678015-25678065	A549	lung:	n/a
5	chr9:25678753-25678803	HIPEpiC	eye:	n/a
6	chr9:25678683-25678733	HUVEC	blood vessel:	n/a
7	chr9:25678015-25678065	MCF10A-Er-Src	breast:	n/a
8	chr9:25678485-25678535	HEEpiC	esophagus:	n/a
9	chr9:25677628-25677678	MCF-7	breast:	n/a
10	chr9:25677628-25677678	NHDF-neo	bronchial:	n/a
11	chr9:25677628-25677678	HEEpiC	esophagus:	n/a
12	chr9:25677628-25677678	SKMC	muscle:	n/a
13	chr9:25677495-25677545	NH-A	brain:	n/a
14	chr9:25678015-25678065	PrEC	prostate:	n/a
15	chr9:25678015-25678065	HRE	kidney:	n/a
16	chr9:25677495-25677545	NHBE	bronchial:	n/a
17	chr9:25677628-25677678	GM12892	blood:	n/a
18	chr9:25678683-25678733	HIPEpiC	eye:	n/a
19	chr9:25678683-25678733	ProgFib	skin:	n/a
20	chr9:25678683-25678733	K562	blood:	n/a
21	chr9:25678015-25678065	HNPCEpiC	eye:	n/a
22	chr9:25678683-25678733	AG04449	skin:	fetal
23	chr9:25677628-25677678	PANC-1	pancreas:	n/a
24	chr9:25678683-25678733	HRE	kidney:	n/a
25	chr9:25678753-25678803	RPTEC	kidney:	n/a
26	chr9:25678753-25678803	AoSMC	blood vessel:	n/a
27	chr9:25677628-25677678	BE2_C	brain:	n/a
28	chr9:25678485-25678535	NHDF-neo	bronchial:	n/a
29	chr9:25678683-25678733	HepG2	liver:	n/a
30	chr9:25678485-25678535	SK-N-SH_RA	brain:	n/a
31	chr9:25678015-25678065	NH-A	brain:	n/a
32	chr9:25678485-25678535	AG04450	lung:	fetal
33	chr9:25677495-25677545	SK-N-MC	brain:	n/a
34	chr9:25677495-25677545	H1-hESC	embryonic stem cell:	embryo
35	chr9:25678485-25678535	SAEC	small airway:	n/a
36	chr9:25678683-25678733	SK-N-MC	brain:	n/a
37	chr9:25678683-25678733	HNPCEpiC	eye:	n/a
38	chr9:25678753-25678803	LNCaP	prostate:	n/a
39	chr9:25678015-25678065	Hepatocyte	liver:	n/a
40	chr9:25677628-25677678	NB4	blood:	n/a
41	chr9:25678683-25678733	HRPEpiC	eye:	n/a
42	chr9:25677628-25677678	GM12878	blood:	n/a
43	chr9:25677628-25677678	H1-hESC	embryonic stem cell:	embryo
44	chr9:25677628-25677678	HNPCEpiC	eye:	n/a
45	chr9:25677628-25677678	PrEC	prostate:	n/a
46	chr9:25678485-25678535	HCM	heart:	n/a
47	chr9:25678683-25678733	HEK293	kidney:	embryo
48	chr9:25677628-25677678	SK-N-MC	brain:	n/a
49	chr9:25678015-25678065	HRPEpiC	eye:	n/a
50	chr9:25678015-25678065	NHBE	bronchial:	n/a

(count:9 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr9:25517372..25520682-chr9:25675267..25678566,4	MCF-7	breast:
2	chr10:112326747..112327613-chr9:25677447..25678064,2	Hela-S3	cervix:
3	chr10:123872158..123872830-chr9:25677516..25678397,2	Hela-S3	cervix:
4	chr17:56735486..56737585-chr9:25675306..25677414,2	MCF-7	breast:
5	chr9:25675224..25676763-chr9:25677105..25678676,2	MCF-7	breast:
6	chr9:25662809..25665496-chr9:25677024..25678546,2	MCF-7	breast:
7	chr9:25654596..25657543-chr9:25679072..25681008,2	MCF-7	breast:
8	chr9:25418497..25420216-chr9:25675741..25678077,2	MCF-7	breast:
9	chr6:136437819..136438612-chr9:25676746..25677272,2	MCF-7	breast:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-IFT74-9	chr9:25678858-25682961	NONHSAT130501

No data

Variant related genes	Relation type
TUSC1	TF binding region
TUSC1	CpG island
ENSG00000138162	chromatin interactions
ENSG00000202077	chromatin interactions
ENSG00000108055	chromatin interactions

Extended variants
information (count: 134 )
Associated
traits (count: 122 )

Variant overlapped rSNPs/rCNVs (count:134 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs114948668	chr9:25677044-25677045	Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
2	rs571428995	chr9:25677117-25677118	Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs149036155	chr9:25677126-25677127	Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs143160482	chr9:25677130-25677131	Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs557559665	chr9:25677136-25677137	Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs35009436	chr9:25677185-25677186	Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs538613749	chr9:25677205-25677206	Active TSS Flanking Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs12348	chr9:25677215-25677216	Active TSS Flanking Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
9	rs190513567	chr9:25677233-25677234	Active TSS Flanking Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs148285595	chr9:25677243-25677244	Active TSS Flanking Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs1128957	chr9:25677257-25677258	Active TSS Flanking Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
12	rs554811472	chr9:25677288-25677289	Active TSS Flanking Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs566848199	chr9:25677299-25677300	Active TSS Flanking Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs375220619	chr9:25677300-25677301	Active TSS Flanking Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs74174596	chr9:25677310-25677311	Active TSS Flanking Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs79831554	chr9:25677311-25677312	Active TSS Flanking Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs534275868	chr9:25677332-25677333	Active TSS Flanking Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs1128953	chr9:25677349-25677350	Active TSS Flanking Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
19	rs577662110	chr9:25677376-25677377	Active TSS Flanking Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs544801706	chr9:25677385-25677386	Active TSS Flanking Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs182988202	chr9:25677437-25677438	Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
22	rs575308394	chr9:25677448-25677449	Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs115266561	chr9:25677464-25677465	Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs561119695	chr9:25677473-25677474	Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs528403625	chr9:25677475-25677476	Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs187616730	chr9:25677484-25677485	Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs532616914	chr9:25677499-25677500	Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs550830384	chr9:25677504-25677505	Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs569349099	chr9:25677507-25677508	Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs530207850	chr9:25677545-25677546	Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
31	rs191950000	chr9:25677562-25677563	Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
32	rs566784902	chr9:25677571-25677572	Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
33	rs534262863	chr9:25677578-25677579	Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
34	rs184202216	chr9:25677587-25677588	Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
35	rs10812300	chr9:25677588-25677589	Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
36	rs538641448	chr9:25677602-25677603	Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
37	rs556751065	chr9:25677646-25677647	Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
38	rs80023951	chr9:25677647-25677648	Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
39	rs575300677	chr9:25677670-25677671	Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
40	rs542802512	chr9:25677695-25677696	Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
41	rs72631815	chr9:25677698-25677699	Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
42	rs573173283	chr9:25677705-25677706	Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
43	rs540562348	chr9:25677725-25677726	Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
44	rs375112589	chr9:25677730-25677731	Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
45	rs368924059	chr9:25677781-25677782	Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
46	rs372254469	chr9:25677789-25677790	Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
47	rs532368591	chr9:25677801-25677802	Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
48	rs201727379	chr9:25677843-25677844	Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
49	rs369000698	chr9:25677845-25677846	Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
50	rs372709875	chr9:25677897-25677898	Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:122)

Disease	PMID	Source
Breast cancer	16608533	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Glioblastoma multiforme	21080181	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	16272173	CNVD
Medulloblastoma	21979893	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Cervical cancer	21063398	CNVD
Retinoblastoma	22278416	CNVD
Splenic marginal zone lymphoma	18492102	CNVD
Melanoma	18172304	CNVD
Biliary cancer	19435499	CNVD
Gastric cancer	21586687	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myopathy	18421352	CNVD
Neuroblastoma	18664255	CNVD
Acute lymphoblastic leukemia	18957548	CNVD
Myeloproliferative neoplasm	17564968	CNVD
Malignant meningioma	17937814	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oligodendroglial tumors	17285580	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
microdeletion syndrome	16199537	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Cancer	20164919	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Lung cancer	18438408	CNVD
Urothelial carcinoma	21177765	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Chronic myeloid leukemia	21384125	CNVD
Breast cancer	21785460	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Renal cell carcinoma	21668985	CNVD
Myelodysplastic syndrome	21251322	CNVD
Autism	22495311	CNVD
Hepatocellular carcinoma	18803288	CNVD
Metanephric adenoma	20802469	CNVD
Developmental delay	21147756	CNVD
Pilocytic astrocytoma	18670637	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Melanoma	22183965	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Non-small cell lung cancer	19010865	CNVD
Myoepithelioma	18604193	CNVD
Cancer	22183965	CNVD
Acute myeloid leukemia	19651601	CNVD
Coronary Disease	20032323	CNVD
Squamous cell cancer	20885788	CNVD
Hirschsprung''s Disease	21712996	CNVD
Cancer	21732550	CNVD
Gastric cancer	22539939	CNVD
Cancer	21183584	CNVD
T-cell lymphomas	19863542	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Metastatic melanoma	18483359	CNVD
Non-small cell lung cancer	20864512	CNVD
Cervical cancer	21062161	CNVD
Acute myeloid leukemia	16864856	CNVD
Glioblastoma	17090523	CNVD
Lung cancer	16773561	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Colorectal cancer	16774939	CNVD
Bladder cancer	19088036	CNVD
Colorectal cancer	16272173	CNVD
Melanoma	16977458	CNVD
Glioblastoma multiforme	17369134	CNVD
Chagasic megaesophagus	20163722	CNVD
Melanoma	19566914	CNVD
Squamous cell cancer	19047905	CNVD
Lung adenocarcinoma	19525976	CNVD
Lung cancer	19525976	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Hodgkin''s lymphoma	18179710	CNVD
Adenoid cystic carcinoma	18332873	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Acute myeloid leukemia	21251322	CNVD
Oral cancer	21386901	CNVD
Breast cancer	21858162	CNVD
Esophageal adenocarcinoma	18519675	CNVD
Pancreatic cancer	21811587	CNVD
Bipolar disorder	19114987	CNVD
Barrett''s syndrome	19417022	CNVD
Myelofibrosis	22110671	CNVD
Urothelial cell carcinoma	18451213	CNVD
polycythaemia	22829968	CNVD
Neuroblastoma	21899760	CNVD
Breast cancer	21364760	CNVD
early-passage human iPS cells	21368824	CNVD
Autism	20858261	CNVD
Epilepsy	20858261	CNVD
Mental retardation	20858261	CNVD

Chromatin state (count:336 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:25673200-25677200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr9:25673800-25677200	Weak transcription	Placenta	Placenta
3	chr9:25674400-25677400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr9:25675200-25677000	Enhancers	iPS-15b Cell Line	embryonic stem cell
5	chr9:25675600-25677000	Enhancers	Brain Germinal Matrix	brain
6	chr9:25675800-25677000	Weak transcription	HUES6 Cell Line	embryonic stem cell
7	chr9:25675800-25677000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
8	chr9:25675800-25677000	Weak transcription	Fetal Lung	lung
9	chr9:25675800-25677200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
10	chr9:25676000-25677000	Weak transcription	HUES48 Cell Line	embryonic stem cell
11	chr9:25676000-25677000	Weak transcription	HUES64 Cell Line	embryonic stem cell
12	chr9:25676000-25677000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
13	chr9:25676000-25677600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
14	chr9:25676200-25677200	Weak transcription	H1 Cell Line	embryonic stem cell
15	chr9:25676200-25677400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
16	chr9:25676200-25678400	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
17	chr9:25676200-25678800	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
18	chr9:25676400-25677000	Enhancers	Adipose Nuclei	Adipose
19	chr9:25676400-25677000	Enhancers	Fetal Brain Male	brain
20	chr9:25676400-25677000	Enhancers	Fetal Brain Female	brain
21	chr9:25676400-25677200	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
22	chr9:25676400-25677400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
23	chr9:25676400-25678600	Active TSS	NHEK	skin
24	chr9:25676600-25677000	Enhancers	Duodenum Smooth Muscle	Duodenum
25	chr9:25676600-25677000	Enhancers	HUVEC	blood vessel
26	chr9:25676600-25677000	Enhancers	NHDF-Ad	bronchial
27	chr9:25676600-25677200	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
28	chr9:25676600-25678200	Active TSS	HMEC	breast
29	chr9:25676600-25678800	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
30	chr9:25676600-25679400	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
31	chr9:25676800-25677000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
32	chr9:25676800-25677000	Enhancers	Muscle Satellite Cultured Cells	--
33	chr9:25676800-25677000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
34	chr9:25676800-25677000	Enhancers	NH-A	brain
35	chr9:25676800-25677400	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
36	chr9:25676800-25678600	Active TSS	Rectal Mucosa Donor 29	rectum
37	chr9:25676800-25678600	Active TSS	A549	lung
38	chr9:25677000-25677200	Flanking Active TSS	HUES48 Cell Line	embryonic stem cell
39	chr9:25677000-25677200	Flanking Active TSS	HUES64 Cell Line	embryonic stem cell
40	chr9:25677000-25677200	Flanking Active TSS	iPS-15b Cell Line	embryonic stem cell
41	chr9:25677000-25677200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
42	chr9:25677000-25677200	Enhancers	Cortex derived primary cultured neurospheres	brain
43	chr9:25677000-25677200	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
44	chr9:25677000-25677200	Flanking Active TSS	Adipose Nuclei	Adipose
45	chr9:25677000-25677200	Enhancers	Brain Substantia Nigra	brain
46	chr9:25677000-25677200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
47	chr9:25677000-25677200	Active TSS	Fetal Brain Female	brain
48	chr9:25677000-25677200	Active TSS	Fetal Thymus	thymus
49	chr9:25677000-25677200	Enhancers	Skeletal Muscle Male	skeletal muscle
50	chr9:25677000-25677400	Bivalent Enhancer	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

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