No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs79301666 |
chr19:19143108-19143109 |
Active TSS Flanking Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs141585559 |
chr19:19143110-19143111 |
Active TSS Flanking Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs555375100 |
chr19:19143140-19143141 |
Active TSS Flanking Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs28376498 |
chr19:19143220-19143221 |
Active TSS Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
5 |
rs554461640 |
chr19:19143228-19143229 |
Active TSS Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs139339816 |
chr19:19143232-19143233 |
Active TSS Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs577921231 |
chr19:19143240-19143241 |
Active TSS Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs149645666 |
chr19:19143256-19143257 |
Active TSS Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs559883491 |
chr19:19143261-19143262 |
Active TSS Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs528640078 |
chr19:19143269-19143270 |
Active TSS Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs74487847 |
chr19:19143309-19143310 |
Active TSS Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs78983452 |
chr19:19143372-19143373 |
Active TSS Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs562143472 |
chr19:19143379-19143380 |
Active TSS Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs192291761 |
chr19:19143389-19143390 |
Active TSS Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs58514603 |
chr19:19143407-19143408 |
Active TSS Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs570661721 |
chr19:19143416-19143417 |
Active TSS Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs539640829 |
chr19:19143434-19143435 |
Active TSS Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs74407063 |
chr19:19143446-19143447 |
Active TSS Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs28445835 |
chr19:19143455-19143456 |
Active TSS Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
20 |
rs140745562 |
chr19:19143489-19143490 |
Active TSS Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs144605657 |
chr19:19143608-19143609 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs183029691 |
chr19:19143617-19143618 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs28699197 |
chr19:19143632-19143633 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
24 |
rs558036800 |
chr19:19143637-19143638 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs147916621 |
chr19:19143640-19143641 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs578033281 |
chr19:19143641-19143642 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs185905963 |
chr19:19143678-19143679 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs28619464 |
chr19:19143687-19143688 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
29 |
rs573355532 |
chr19:19143722-19143723 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs542334777 |
chr19:19143799-19143800 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs533287890 |
chr19:19143868-19143869 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs561902684 |
chr19:19143878-19143879 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs530934611 |
chr19:19143917-19143918 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs544324733 |
chr19:19143921-19143922 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs139983693 |
chr19:19143968-19143969 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs566510982 |
chr19:19144014-19144015 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs546767934 |
chr19:19144033-19144034 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs566743584 |
chr19:19144041-19144042 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs528947792 |
chr19:19144076-19144077 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs549071840 |
chr19:19144276-19144277 |
Active TSS Transcr. at gene 5' and 3' Weak transcription
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs568713274 |
chr19:19144283-19144284 |
Active TSS Transcr. at gene 5' and 3' Weak transcription
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs537845970 |
chr19:19144355-19144356 |
Active TSS Transcr. at gene 5' and 3' Weak transcription
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs557828438 |
chr19:19144392-19144393 |
Active TSS Transcr. at gene 5' and 3' Weak transcription
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs10422238 |
chr19:19144414-19144415 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
45 |
rs535753915 |
chr19:19144440-19144441 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs553983428 |
chr19:19144556-19144557 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs573898984 |
chr19:19144616-19144617 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs541908043 |
chr19:19144636-19144637 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs74182618 |
chr19:19144700-19144701 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs575688248 |
chr19:19144722-19144723 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|