Variant report

Variant	esv3362401
Chromosome Location	chr8:3841405-3841690
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 60 )
Associated
traits (count: 125 )

Variant overlapped rSNPs/rCNVs (count:60 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs183401262	chr8:3841405-3841406	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs2740805	chr8:3841418-3841419	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
3	rs371342064	chr8:3841433-3841434	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs374132897	chr8:3841445-3841446	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs556435067	chr8:3841456-3841457	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs202178720	chr8:3841457-3841458	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs560549771	chr8:3841460-3841461	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs528118550	chr8:3841464-3841465	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs546340340	chr8:3841467-3841468	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs576731299	chr8:3841469-3841470	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs571322483	chr8:3841471-3841472	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs544288572	chr8:3841474-3841475	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs187525097	chr8:3841476-3841477	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs200545900	chr8:3841477-3841478	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs564204511	chr8:3841486-3841487	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs536922165	chr8:3841490-3841491	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs555347339	chr8:3841498-3841499	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs566862784	chr8:3841502-3841503	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs534207221	chr8:3841503-3841504	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs558731609	chr8:3841506-3841507	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs577689163	chr8:3841512-3841513	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs34824613	chr8:3841516-3841517	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs199644891	chr8:3841517-3841518	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs539892900	chr8:3841526-3841527	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs191460453	chr8:3841528-3841529	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs184662625	chr8:3841540-3841541	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs113075011	chr8:3841546-3841547	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs542506145	chr8:3841547-3841548	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs187559394	chr8:3841558-3841559	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs78864192	chr8:3841559-3841560	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs79341544	chr8:3841560-3841561	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs549260279	chr8:3841570-3841571	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs572462408	chr8:3841577-3841578	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs112321950	chr8:3841579-3841580	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs10094217	chr8:3841583-3841584	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs564794958	chr8:3841584-3841585	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs10103951	chr8:3841587-3841588	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs532219309	chr8:3841595-3841596	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs562310083	chr8:3841598-3841599	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs149942956	chr8:3841600-3841601	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs370392041	chr8:3841601-3841602	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs200134065	chr8:3841610-3841611	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs200843970	chr8:3841612-3841613	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs201696080	chr8:3841613-3841614	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs386721174	chr8:3841624-3841625	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs10094057	chr8:3841625-3841626	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs79490532	chr8:3841626-3841627	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs10094058	chr8:3841629-3841630	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs548858572	chr8:3841630-3841631	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs567171609	chr8:3841635-3841636	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:125)

Disease	PMID	Source
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Prostate cancer	16573809	CNVD
Myelofibrosis	22110671	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
abnormal development	18461090	CNVD
Crohn''s disease	19220326	CNVD
Psoriasis	19220326	CNVD
Prostate cancer	21965145	CNVD
Prostate cancer	18515986	CNVD
Chronic obstructive pulmonary disease	20378733	CNVD
Autism	18414403	CNVD
Cancer	21183584	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Breast cancer	17603634	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Ovarian cancer	20844748	CNVD
Cervical cancer	17311676	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Schizophrenia	20877625	CNVD
Disorders of sex development	21048976	CNVD
Colorectal cancer	16272173	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Breast cancer	17001317	CNVD
Thyroid cancer	19087340	CNVD
Multiple myeloma	16616336	CNVD
Hepatocellular carcinoma	22174799	CNVD
Heart disease	21282601	CNVD
T-cell lymphomas	19863542	CNVD
Ovarian cancer	22174824	CNVD
Colorectal cancer	21297112	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Salivary gland tumor	18059337	CNVD
Breast cancer	17133270	CNVD
Melanoma	18172304	CNVD
Medulloblastoma	21979893	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Breast cancer	17393978	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Breast cancer	20837533	CNVD
Squamous cell cancer	21044232	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	22429812	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Colorectal cancer	20709793	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Basal cell lymphoma	21115979	CNVD
Breast cancer	21264507	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Oral cancer	21386901	CNVD
Prostate cancer	21088497	CNVD
Breast cancer	20940404	CNVD
Colorectal cancer	19359472	CNVD
Embryonal rhabdomyosarcoma	16790082	CNVD
Gastric cancer	17167181	CNVD
Prostate cancer	16705090	CNVD
8p-syndrome	17576883	CNVD
Human rectal carcinomas	16397240	CNVD
Medulloblastoma	16968546	CNVD
Lung adenocarcinoma	19525976	CNVD
Lung cancer	19525976	CNVD
Prostate cancer	17245344	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Cancer	16751803	CNVD
Wilms tumour	21544195	CNVD
Gastric cancer	17908304	CNVD
Autism	19415332	CNVD
Malaria	21533027	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Esophageal cancer	21851588	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21245420	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Breast cancer	21785460	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Acute myeloid leukemia	20729466	CNVD
Ductal carcinoma	22052326	CNVD
Breast cancer	21509527	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Epilepsy	22083797	CNVD
Acute myeloid leukemia	21251322	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21858162	CNVD
lymphocytic leukemia	21291569	CNVD
Liver carcinoma	19366792	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Autism	22495311	CNVD
Congenital diaphragmatic hernia	21064195	CNVD
Breast cancer	21364760	CNVD
Cancer	20164920	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Non-small cell lung cancer	21829676	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Prostate cancer	17217626	CNVD
Developmental delay	19128483	CNVD
Neuroticism	17667963	CNVD
Leukoplakia	24403051	CNVD
Intellectual disability	22045946	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Breast cancer	16608533	CNVD
Seminomas	18059402	CNVD
Urothelial carcinoma	21177765	CNVD
Lung cancer	18438408	CNVD
small cell lung cancer	20016488	CNVD
Colorectal cancer	16774939	CNVD
Colorectal cancer	21645411	CNVD
Colorectal cancer	22014273	CNVD
Lung squamous cell carcinoma	22363434	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Cancer	20164919	CNVD
Non-syndromic sensorineural hearing loss	17289997	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Chronic myeloid leukemia	21384125	CNVD
Tetralogy of Fallot	22912587	CNVD

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:3839400-3843000	Weak transcription	HepG2	liver
2	chr8:3841400-3841800	Enhancers	Liver	Liver

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