Variant report
Variant | esv3363082 |
---|---|
Chromosome Location | chr8:1332695-1334793 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
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No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs68084829 | chr8:1332714-1332715 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
2 | rs71497195 | chr8:1332719-1332720 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
3 | rs71497191 | chr8:1332720-1332721 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
4 | rs62484191 | chr8:1332721-1332722 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
5 | rs74194202 | chr8:1332734-1332735 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
6 | rs71497190 | chr8:1332736-1332737 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
7 | rs74206354 | chr8:1332741-1332742 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
8 | rs71497194 | chr8:1332753-1332754 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
9 | rs372986895 | chr8:1332762-1332763 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
10 | rs376961148 | chr8:1332763-1332764 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
11 | rs531572763 | chr8:1332783-1332784 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
12 | rs71183715 | chr8:1332793-1332794 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
13 | rs79639671 | chr8:1332805-1332806 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
14 | rs77926450 | chr8:1332819-1332820 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
15 | rs376111324 | chr8:1332820-1332821 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
16 | rs377671484 | chr8:1332823-1332824 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
17 | rs74931149 | chr8:1332840-1332841 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
18 | rs539797030 | chr8:1332858-1332859 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
19 | rs75638516 | chr8:1332882-1332883 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
20 | rs78872296 | chr8:1332888-1332889 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
21 | rs71497196 | chr8:1332889-1332890 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
22 | rs76430809 | chr8:1332919-1332920 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
23 | rs78526122 | chr8:1332924-1332925 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
24 | rs371413996 | chr8:1332926-1332927 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
25 | rs76833720 | chr8:1332930-1332931 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
26 | rs71497197 | chr8:1332931-1332932 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
27 | rs374160163 | chr8:1332941-1332942 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
28 | rs367689724 | chr8:1332952-1332953 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
29 | rs79264640 | chr8:1332966-1332967 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
30 | rs375354950 | chr8:1332973-1332974 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
31 | rs553101401 | chr8:1332974-1332975 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
32 | rs79369412 | chr8:1332988-1332989 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
33 | rs62484192 | chr8:1333008-1333009 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
34 | rs371813694 | chr8:1333013-1333014 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
35 | rs374990293 | chr8:1333015-1333016 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
36 | rs367978536 | chr8:1333033-1333034 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
37 | rs535598203 | chr8:1333044-1333045 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
38 | rs76304593 | chr8:1333047-1333048 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
39 | rs190616787 | chr8:1333049-1333050 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
40 | rs372629760 | chr8:1333050-1333051 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
41 | rs575422995 | chr8:1333085-1333086 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
42 | rs71190732 | chr8:1333086-1333087 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
43 | rs71516190 | chr8:1333092-1333093 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
44 | rs74652673 | chr8:1333099-1333100 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
45 | rs73172503 | chr8:1333110-1333111 | Weak transcription | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
46 | rs534589811 | chr8:1333116-1333117 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
47 | rs371712658 | chr8:1333117-1333118 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
48 | rs185234999 | chr8:1333119-1333120 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
49 | rs145584887 | chr8:1333137-1333138 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
50 | rs557980663 | chr8:1333138-1333139 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Ovarian cancer | 21720365 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Acute lymphoblastic leukemia | 21390130 | CNVD |
Congenital diaphragmatic hernia | 21341218 | CNVD |
Cancer | 18840272 | CNVD |
Pilocytic astrocytoma | 18622384 | CNVD |
Acute lymphoblastic leukemia | 21098271 | CNVD |
Basal cell lymphoma | 16317097 | CNVD |
Diffuse large b-cell lymphoma | 16317097 | CNVD |
Prostate cancer | 16573809 | CNVD |
Ovarian clear cell carcinoma | 21343371 | CNVD |
abnormal development | 18461090 | CNVD |
Crohn''s disease | 19220326 | CNVD |
Psoriasis | 19220326 | CNVD |
Prostate cancer | 21965145 | CNVD |
Prostate cancer | 18515986 | CNVD |
Chronic obstructive pulmonary disease | 20378733 | CNVD |
Autism | 18414403 | CNVD |
Cancer | 21183584 | CNVD |
Non-syndromic sensorineural hearing loss | 15273396 | CNVD |
Breast cancer | 17603634 | CNVD |
Myeloproliferative neoplasm | 20015882 | CNVD |
Ovarian cancer | 20844748 | CNVD |
Cervical cancer | 17311676 | CNVD |
High-grade prostatic intraepithelial neoplasia | 16573809 | CNVD |
Non-syndromic sensorineural hearing loss | 20606397 | CNVD |
Schizophrenia | 20877625 | CNVD |
Disorders of sex development | 21048976 | CNVD |
Colorectal cancer | 16272173 | CNVD |
Basal cell lymphoma | 17170743 | CNVD |
Follicular lymphoma | 17170743 | CNVD |
Breast cancer | 17001317 | CNVD |
Thyroid cancer | 19087340 | CNVD |
Multiple myeloma | 16616336 | CNVD |
Hepatocellular carcinoma | 22174799 | CNVD |
Heart disease | 21282601 | CNVD |
T-cell lymphomas | 19863542 | CNVD |
Ovarian cancer | 22174824 | CNVD |
Colorectal cancer | 21297112 | CNVD |
Hodgkin''s lymphoma | 18641027 | CNVD |
Salivary gland tumor | 18059337 | CNVD |
Breast cancer | 17133270 | CNVD |
Melanoma | 18172304 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Chronic lymphocytic leukemia | 18922857 | CNVD |
Breast cancer | 17393978 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Cancer | 21637783 | CNVD |
Breast cancer | 20837533 | CNVD |
Squamous cell cancer | 21044232 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Cancer | 22429812 | CNVD |
Non-small cell lung cancer | 21044232 | CNVD |
Non-syndromic sensorineural hearing loss | 18471307 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Colorectal cancer | 20709793 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Basal cell lymphoma | 21115979 | CNVD |
Breast cancer | 21264507 | CNVD |
Carcinoma ex pleomorphic adenoma | 18828159 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Glioblastoma multiforme | 19960244 | CNVD |
Oral cancer | 21386901 | CNVD |
Prostate cancer | 21088497 | CNVD |
Breast cancer | 20940404 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Embryonal rhabdomyosarcoma | 16790082 | CNVD |
Gastric cancer | 17167181 | CNVD |
Prostate cancer | 16705090 | CNVD |
8p-syndrome | 17576883 | CNVD |
Human rectal carcinomas | 16397240 | CNVD |
Medulloblastoma | 16968546 | CNVD |
Lung adenocarcinoma | 19525976 | CNVD |
Lung cancer | 19525976 | CNVD |
Prostate cancer | 17245344 | CNVD |
Gastrointestinal stromal cancer | 16982739 | CNVD |
Cancer | 16751803 | CNVD |
Wilms tumour | 21544195 | CNVD |
Gastric cancer | 17908304 | CNVD |
Autism | 19415332 | CNVD |
Malaria | 21533027 | CNVD |
Non-syndromic sensorineural hearing loss | 22037309 | CNVD |
Esophageal cancer | 21851588 | CNVD |
Acute promyelocytic leukemia | 19109227 | CNVD |
Breast cancer | 21245420 | CNVD |
Acute lymphoblastic leukemia | 21248843 | CNVD |
Cancer | 20164919 | CNVD |
Breast cancer | 21785460 | CNVD |
Thoracic aortic aneurysm | 21092924 | CNVD |
Lung cancer | 18438408 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
Ductal carcinoma | 22052326 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Breast cancer | 21509527 | CNVD |
T-cell prolymphocytic leukemia | 17713554 | CNVD |
Acute lymphoblastic leukemia | 22237106 | CNVD |
Epilepsy | 22083797 | CNVD |
Acute myeloid leukemia | 21251322 | CNVD |
low-grade B-cell lymphoma tumor | 18367492 | CNVD |
Breast cancer | 21364760 | CNVD |
Esophageal adenocarcinoma | 19417022 | CNVD |
Prostate cancer | 18632612 | CNVD |
Breast cancer | 21858162 | CNVD |
lymphocytic leukemia | 21291569 | CNVD |
Liver carcinoma | 19366792 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Autism | 22495311 | CNVD |
Autism | 20531469 | CNVD |
Breast cancer | 20932292 | CNVD |
Congenital diaphragmatic hernia | 21064195 | CNVD |
Stenocardia | 21860640 | CNVD |
Vasospasm | 21860640 | CNVD |
Non-syndromic sensorineural hearing loss | 18451855 | CNVD |
Pancreatic ductal adenocarcinoma | 19077451 | CNVD |
Non-syndromic sensorineural hearing loss | 19587683 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr8:1315800-1336800 | Weak transcription | Right Atrium | heart |