Variant report

Variant	esv3365660
Chromosome Location	chr9:21944001-21969383
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:21965702-21965830	HepG2	liver:	n/a	n/a
2	ATF2	chr9:21965042-21965442	GM12878	blood:	n/a	n/a
3	BACH1	chr9:21965034-21966311	H1-hESC	embryonic stem cell:	n/a	n/a
4	BHLHE40	chr9:21964937-21965362	GM12878	blood:	n/a	chr9:21965119-21965135
5	BHLHE40	chr9:21965586-21965850	GM12878	blood:	n/a	n/a
6	BRCA1	chr9:21967321-21967834	H1-hESC	embryonic stem cell:	n/a	n/a
7	BRCA1	chr9:21955416-21955616	Hela-S3	cervix:	n/a	n/a
8	CEBPB	chr9:21961569-21961978	ECC-1	luminal epithelium:	n/a	chr9:21961763-21961774 chr9:21961765-21961774 chr9:21961765-21961774 chr9:21961765-21961774
9	CEBPB	chr9:21967140-21967148	H1-hESC	embryonic stem cell:	n/a	n/a
10	CEBPB	chr9:21949109-21949300	IMR90	lung:	n/a	n/a
11	CEBPB	chr9:21961577-21961953	IMR90	lung:	n/a	chr9:21961763-21961774 chr9:21961765-21961774 chr9:21961765-21961774 chr9:21961765-21961774
12	CEBPB	chr9:21949076-21949338	Hela-S3	cervix:	n/a	n/a
13	CEBPB	chr9:21961631-21961951	H1-hESC	embryonic stem cell:	n/a	chr9:21961763-21961774 chr9:21961765-21961774 chr9:21961765-21961774 chr9:21961765-21961774
14	CEBPB	chr9:21961575-21961959	Hela-S3	cervix:	n/a	chr9:21961763-21961774 chr9:21961765-21961774 chr9:21961765-21961774 chr9:21961765-21961774
15	CEBPB	chr9:21961587-21961950	HepG2	liver:	n/a	chr9:21961763-21961774 chr9:21961765-21961774 chr9:21961765-21961774 chr9:21961765-21961774
16	CEBPB	chr9:21961605-21961989	ECC-1	luminal epithelium:	n/a	chr9:21961763-21961774 chr9:21961765-21961774 chr9:21961765-21961774 chr9:21961765-21961774
17	CHD2	chr9:21965526-21965878	GM12878	blood:	n/a	n/a
18	CHD2	chr9:21965557-21965924	HepG2	liver:	n/a	n/a
19	CHD2	chr9:21967261-21967461	Hela-S3	cervix:	n/a	n/a
20	CHD2	chr9:21967221-21967658	H1-hESC	embryonic stem cell:	n/a	n/a
21	CHD2	chr9:21965562-21965879	H1-hESC	embryonic stem cell:	n/a	n/a
22	CTBP2	chr9:21964975-21966544	H1-hESC	embryonic stem cell:	n/a	n/a
23	CTBP2	chr9:21969213-21971396	H1-hESC	embryonic stem cell:	n/a	n/a
24	CTCF	chr9:21965582-21965835	GM19238	blood:	n/a	n/a
25	CTCF	chr9:21965569-21965815	HepG2	liver:	n/a	n/a
26	CTCF	chr9:21965620-21965770	Caco-2	colon:	n/a	n/a
27	CTCF	chr9:21965600-21965750	GM06990	blood:	n/a	n/a
28	CTCF	chr9:21965200-21965350	AG04450	lung:	n/a	n/a
29	CTCF	chr9:21961130-21961171	GM20000	blood:	n/a	n/a
30	CTCF	chr9:21965640-21965790	BJ	skin:	n/a	n/a
31	CTCF	chr9:21965620-21965770	HepG2	liver:	n/a	n/a
32	CTCF	chr9:21965589-21965822	GM19239	blood:	n/a	n/a
33	CTCF	chr9:21968320-21968470	HRE	kidney:	n/a	n/a
34	CTCF	chr9:21968360-21968510	BJ	skin:	n/a	chr9:21968483-21968496
35	CTCF	chr9:21964955-21966087	SK-N-SH	brain:	n/a	n/a
36	CTCF	chr9:21965610-21965765	HepG2	liver:	n/a	n/a
37	CTCF	chr9:21965620-21965770	HL-60	blood:	n/a	n/a
38	CTCF	chr9:21968400-21968550	HCPEpiC	choroid plexus:	n/a	chr9:21968483-21968496
39	CTCF	chr9:21965600-21965750	GM12865	blood:	n/a	n/a
40	CTCF	chr9:21965620-21965770	SAEC	small airway:	n/a	n/a
41	CTCF	chr9:21968540-21968690	SAEC	small airway:	n/a	n/a
42	CTCF	chr9:21965660-21965810	GM12869	blood:	n/a	n/a
43	CTCF	chr9:21965640-21965790	SK-N-SH_RA	brain:	n/a	n/a
44	CTCF	chr9:21965532-21965833	Fibrobl	skin:	n/a	n/a
45	CTCF	chr9:21965587-21965770	SK-N-SH_RA	brain:	n/a	n/a
46	CTCF	chr9:21965660-21965810	HCT-116	colon:	n/a	n/a
47	CTCF	chr9:21968360-21968510	AG09319	gingival:	n/a	chr9:21968483-21968496
48	CTCF	chr9:21968400-21968550	AG10803	skin:	n/a	chr9:21968483-21968496
49	CTCF	chr9:21965499-21965909	IMR90	lung:	n/a	n/a
50	CTCF	chr9:21968400-21968550	HUVEC	blood vessel:	n/a	chr9:21968483-21968496

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:21968233-21968283	Hepatocyte	liver:	n/a
2	chr9:21968233-21968283	HCPEpiC	choroid plexus:	n/a
3	chr9:21968233-21968283	HCT-116	colon:	n/a
4	chr9:21968233-21968283	H1-hESC	embryonic stem cell:	embryo
5	chr9:21968233-21968283	HCM	heart:	n/a
6	chr9:21968233-21968283	HEK293	kidney:	embryo
7	chr9:21968233-21968283	HL-60	blood:	n/a
8	chr9:21968233-21968283	GM12878	blood:	n/a
9	chr9:21968233-21968283	HEEpiC	esophagus:	n/a
10	chr9:21968233-21968283	Hela-S3	cervix:	n/a
11	chr9:21968233-21968283	SK-N-SH	brain:	n/a
12	chr9:21968233-21968283	SKMC	muscle:	n/a
13	chr9:21968233-21968283	MCF-7	breast:	n/a
14	chr9:21968233-21968283	PANC-1	pancreas:	n/a
15	chr9:21968233-21968283	LNCaP	prostate:	n/a
16	chr9:21968233-21968283	PrEC	prostate:	n/a
17	chr9:21968233-21968283	RPTEC	kidney:	n/a
18	chr9:21968233-21968283	AG09309	skin:	n/a
19	chr9:21968233-21968283	HAEpiC	amniotic membrane:	n/a
20	chr9:21968233-21968283	GM12892	blood:	n/a
21	chr9:21968233-21968283	GM19239	blood:	n/a
22	chr9:21968233-21968283	IMR90	lung:	fetal
23	chr9:21968233-21968283	NT2-D1	testis:	n/a
24	chr9:21968233-21968283	HMEC	breast:	n/a
25	chr9:21968233-21968283	CMK	blood:	n/a
26	chr9:21968233-21968283	ovcar-3	ovarian:	n/a
27	chr9:21968233-21968283	ECC-1	luminal epithelium:	n/a
28	chr9:21968233-21968283	BE2_C	brain:	n/a
29	chr9:21968233-21968283	BJ	skin:	n/a
30	chr9:21968233-21968283	NHDF-neo	bronchial:	n/a
31	chr9:21968233-21968283	GM12891	blood:	n/a
32	chr9:21968233-21968283	ProgFib	skin:	n/a
33	chr9:21968233-21968283	T-47D	breast:	n/a
34	chr9:21968233-21968283	AG04449	skin:	fetal
35	chr9:21968233-21968283	HUVEC	blood vessel:	n/a
36	chr9:21968233-21968283	AG10803	skin:	n/a
37	chr9:21968233-21968283	HRPEpiC	eye:	n/a
38	chr9:21968233-21968283	U87	brain:	n/a
39	chr9:21968233-21968283	GM06990	blood:	n/a
40	chr9:21968233-21968283	NH-A	brain:	n/a
41	chr9:21968233-21968283	Caco-2	colon:	n/a
42	chr9:21968233-21968283	A549	lung:	n/a
43	chr9:21968233-21968283	NB4	blood:	n/a
44	chr9:21968233-21968283	AG09319	gingival:	n/a
45	chr9:21968233-21968283	HepG2	liver:	n/a
46	chr9:21968233-21968283	HRCEpiC	kidney:	n/a
47	chr9:21968233-21968283	Jurkat	blood:	n/a
48	chr9:21968233-21968283	AoSMC	blood vessel:	n/a
49	chr9:21968233-21968283	HNPCEpiC	eye:	n/a
50	chr9:21968233-21968283	MCF10A-Er-Src	breast:	n/a

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-C9orf53-3	chr9:21967138-21967753	NR_024274
2	lnc-C9orf53-4	chr9:21957138-21957752	refGeneNc_2991_NR_024274

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	CDKN2A	hsa-miR-125b-5p	chr9:21967839-21967862

Variant related genes	Relation type
C9orf53	TF binding region
C9orf53	CpG island

Extended variants
information (count: 424 )
Associated
traits (count: 210 )

Variant overlapped rSNPs/rCNVs (count:424 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs4246843	chr9:21944627-21944628	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs184040776	chr9:21944638-21944639	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs116549893	chr9:21944651-21944652	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs80191213	chr9:21944652-21944653	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs377679553	chr9:21944661-21944662	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs566421235	chr9:21944667-21944668	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs78536328	chr9:21944675-21944676	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs367715045	chr9:21944686-21944687	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs533801970	chr9:21944775-21944776	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs571337386	chr9:21944817-21944818	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs4382559	chr9:21944818-21944819	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
12	rs559638514	chr9:21944850-21944851	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs528733909	chr9:21944874-21944875	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs548182496	chr9:21944885-21944886	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs59096723	chr9:21944905-21944906	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs371393226	chr9:21944936-21944937	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs34241408	chr9:21944939-21944940	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs188772104	chr9:21944956-21944957	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs551048504	chr9:21944963-21944964	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs569777109	chr9:21944965-21944966	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs549366682	chr9:21944998-21944999	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs538817479	chr9:21945000-21945001	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs191878365	chr9:21945011-21945012	Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs527699991	chr9:21945017-21945018	Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs369530448	chr9:21945019-21945020	Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs77805270	chr9:21945033-21945034	Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs534866753	chr9:21945037-21945038	Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs554275668	chr9:21945041-21945042	Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs115518012	chr9:21945086-21945087	Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs75102235	chr9:21945097-21945098	Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs563381897	chr9:21945100-21945101	Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs538149403	chr9:21945127-21945128	Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs556151864	chr9:21945206-21945207	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
34	rs376075855	chr9:21945247-21945248	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
35	rs77400930	chr9:21945288-21945289	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
36	rs183729324	chr9:21945312-21945313	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
37	rs189340728	chr9:21945418-21945419	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
38	rs182389998	chr9:21945433-21945434	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
39	rs141008631	chr9:21945467-21945468	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
40	rs370456799	chr9:21945502-21945503	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
41	rs544857167	chr9:21945524-21945525	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
42	rs116770972	chr9:21945532-21945533	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
43	rs114823357	chr9:21945541-21945542	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
44	rs552403257	chr9:21945550-21945551	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
45	rs4360371	chr9:21945562-21945563	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
46	rs16938595	chr9:21945605-21945606	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
47	rs373860693	chr9:21945608-21945609	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
48	rs534956542	chr9:21945616-21945617	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
49	rs368760420	chr9:21945660-21945661	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
50	rs370588378	chr9:21945692-21945693	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:210)

Disease	PMID	Source
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	21979893	CNVD
Breast cancer	16608533	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Cervical cancer	21063398	CNVD
Retinoblastoma	22278416	CNVD
Splenic marginal zone lymphoma	18492102	CNVD
Melanoma	18172304	CNVD
Biliary cancer	19435499	CNVD
Gastric cancer	21586687	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myopathy	18421352	CNVD
Neuroblastoma	18664255	CNVD
Acute lymphoblastic leukemia	18957548	CNVD
Myeloproliferative neoplasm	17564968	CNVD
Malignant meningioma	17937814	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oligodendroglial tumors	17285580	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
microdeletion syndrome	16199537	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Cancer	20164919	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Lung cancer	18438408	CNVD
Urothelial carcinoma	21177765	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Chronic myeloid leukemia	21384125	CNVD
Breast cancer	21785460	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21858162	CNVD
Renal cell carcinoma	21668985	CNVD
Myelodysplastic syndrome	21251322	CNVD
Autism	22495311	CNVD
Hepatocellular carcinoma	18803288	CNVD
Metanephric adenoma	20802469	CNVD
Developmental delay	21147756	CNVD
Pilocytic astrocytoma	18670637	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Melanoma	22183965	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Non-small cell lung cancer	19010865	CNVD
Myoepithelioma	18604193	CNVD
Cancer	22183965	CNVD
Glioblastoma multiforme	21569311	CNVD
Myelofibrosis	22110671	CNVD
Ewing''s sarcoma	22429812	CNVD
Neuroblastoma	21899760	CNVD
Glioblastoma multiforme	19435819	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Cutaneous T-cell lymphoma	21881587	CNVD
Glioblastoma multiforme	22291905	CNVD
Lung cancer	21911935	CNVD
Primary central nervous system lymphoma	21088137	CNVD
head and neck squamous cell carcinoma	21798897	CNVD
Cancer	21253487	CNVD
Glioblastoma multiforme	22286061	CNVD
Intracranial ependymoma	16609018	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Glioblastoma multiforme	21922591	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Urothelial cell carcinoma	18451213	CNVD
Glioma	17123091	CNVD
Mental retardation	17124404	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Acute lymphoblastic leukemia	18768390	CNVD
Leukemia	19602459	CNVD
Acute monocytic leukemia	16498392	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Leukemia	18688285	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Acute myeloid leukemia	19651601	CNVD
Coronary Disease	20032323	CNVD
Squamous cell cancer	20885788	CNVD
Hirschsprung''s Disease	21712996	CNVD
Cancer	21732550	CNVD
Gastric cancer	22539939	CNVD
Cancer	21183584	CNVD
T-cell lymphomas	19863542	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Metastatic melanoma	18483359	CNVD
Non-small cell lung cancer	20864512	CNVD
Cervical cancer	21062161	CNVD
Acute myeloid leukemia	16864856	CNVD
Glioblastoma	17090523	CNVD
Lung cancer	16773561	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Colorectal cancer	16774939	CNVD
Bladder cancer	19088036	CNVD
Colorectal cancer	16272173	CNVD
Melanoma	16977458	CNVD
Glioblastoma multiforme	17369134	CNVD
Chagasic megaesophagus	20163722	CNVD
Melanoma	19566914	CNVD
Squamous cell cancer	19047905	CNVD
Lung adenocarcinoma	19525976	CNVD
Lung cancer	19525976	CNVD
Hodgkin''s lymphoma	18179710	CNVD
Glioma	20126413	CNVD
Melanoma	17363583	CNVD
Glioblastoma multiforme	19115005	CNVD
Glioblastoma multiforme	21138945	CNVD
Adenoid cystic carcinoma	18332873	CNVD
Cancer	20581869	CNVD
Glioblastoma multiforme	21525872	CNVD
Oral cancer	22144094	CNVD
Lung cancer	21569311	CNVD
Barrett''s syndrome	19417022	CNVD
Cancer	20164920	CNVD
Breast cancer	17142309	CNVD
Ependymoma	18628472	CNVD
Ewing''s sarcoma	18628472	CNVD
Glioblastoma multiforme	18628472	CNVD
Breast cancer	21364760	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Lung squamous cell carcinoma	22363434	CNVD
Oral cancer	21386901	CNVD
Cancer	17699850	CNVD
Ovarian cancer	17699850	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Breast cancer	22522925	CNVD
Ewing''s sarcoma	17952124	CNVD
Lung adenocarcinoma	17982442	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Cancer	21272361	CNVD
Acute myeloid leukemia	21251322	CNVD
Burkitt''s lymphoma	19759907	CNVD
Acute myeloid leukemia	19651600	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
Renal cell carcinoma	21215367	CNVD
Gastric cancer	22315472	CNVD
Pancreatic cancer	21811562	CNVD
Acute lymphoblastic leukemia	19129520	CNVD
Acute lymphoblastic leukemia	19039135	CNVD
Cancer	17440616	CNVD
Leukemia	21670474	CNVD
Lung cancer	21512611	CNVD
Prostate cancer	19363497	CNVD
Renal cell carcinoma	21228928	CNVD
T-cell acute lymphoblastic leukemia	16270038	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Cancer	21278246	CNVD
Melanoma	19011513	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Pancreatic cancer	17952125	CNVD
Cancer	17440070	CNVD
Lung cancer	17440070	CNVD
Melanoma	17440070	CNVD
Pancreas cancer	17440070	CNVD
Neuroblastoma	19638189	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Breast cancer	18852474	CNVD
Autism	20858261	CNVD
Epilepsy	20858261	CNVD
Mental retardation	20858261	CNVD
Malignant melanoma	17260012	CNVD
Acute myeloid leukemia	21518781	CNVD
Esophageal cancer	21518781	CNVD
Follicular lymphoma	21518781	CNVD
Glioblastoma multiforme	21518781	CNVD
Mantle cell lymphoma	21518781	CNVD
Neuroblastoma	21518781	CNVD
Ovarian cancer	21518781	CNVD
pediatric acute lymphoblastic leukemia	21518781	CNVD
Colorectal cancer	21518781	CNVD
CNS lymphoma	21518781	CNVD
Lung adenocarcinoma	22272264	CNVD
Neuroblastoma	22034077	CNVD
Glioblastoma multiforme	21713760	CNVD
Bladder cancer	21909424	CNVD

Chromatin state (count:485 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:21944600-21945000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr9:21945000-21945200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr9:21945200-21945800	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr9:21947800-21948200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr9:21949200-21950400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
6	chr9:21961600-21962000	Enhancers	Hela-S3	cervix
7	chr9:21961800-21962000	Enhancers	NHEK	skin
8	chr9:21962000-21966200	Weak transcription	Hela-S3	cervix
9	chr9:21963600-21966200	Bivalent/Poised TSS	Primary T cells from cord blood	blood
10	chr9:21964400-21965000	Bivalent Enhancer	Primary T helper naive cells from peripheral blood	blood
11	chr9:21964400-21969000	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
12	chr9:21964600-21964800	Flanking Bivalent TSS/Enh	Primary T helper cells PMA-I stimulated	--
13	chr9:21964600-21965000	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
14	chr9:21964600-21965000	Bivalent Enhancer	Primary T helper naive cells fromperipheralblood	blood
15	chr9:21964600-21965000	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
16	chr9:21964600-21965000	Bivalent Enhancer	Primary T helper cells fromperipheralblood	blood
17	chr9:21964600-21965000	Bivalent Enhancer	Primary T cells effector/memory enriched fromperipheralblood	blood
18	chr9:21964600-21965200	Bivalent Enhancer	Primary monocytes fromperipheralblood	blood
19	chr9:21964600-21965200	Bivalent Enhancer	Primary Natural Killer cells fromperipheralblood	blood
20	chr9:21964600-21966400	Bivalent Enhancer	Fetal Thymus	thymus
21	chr9:21964800-21965000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
22	chr9:21964800-21965000	Bivalent/Poised TSS	iPS DF 19.11 Cell Line	embryonic stem cell
23	chr9:21964800-21965000	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
24	chr9:21964800-21965000	Bivalent Enhancer	Primary B cells from peripheral blood	blood
25	chr9:21964800-21965000	Bivalent Enhancer	Primary T helper cells PMA-I stimulated	--
26	chr9:21964800-21965000	Bivalent/Poised TSS	Primary T regulatory cells fromperipheralblood	blood
27	chr9:21964800-21965000	Bivalent Enhancer	Primary T killer memory cells from peripheral blood	blood
28	chr9:21964800-21965000	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Female	--
29	chr9:21964800-21965000	Bivalent/Poised TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
30	chr9:21964800-21965000	Bivalent/Poised TSS	Foreskin Melanocyte Primary Cells skin03	Skin
31	chr9:21964800-21965000	Enhancers	Gastric	stomach
32	chr9:21964800-21965000	Bivalent/Poised TSS	Rectal Mucosa Donor 29	rectum
33	chr9:21964800-21965000	Enhancers	GM12878-XiMat	blood
34	chr9:21964800-21965000	Bivalent Enhancer	HUVEC	blood vessel
35	chr9:21964800-21965400	Bivalent/Poised TSS	Rectal Smooth Muscle	rectum
36	chr9:21964800-21965600	Bivalent Enhancer	Lung	lung
37	chr9:21964800-21965800	Bivalent/Poised TSS	ES-WA7 Cell Line	embryonic stem cell
38	chr9:21964800-21965800	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
39	chr9:21964800-21965800	Bivalent Enhancer	Primary hematopoietic stem cells	blood
40	chr9:21964800-21965800	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Male	--
41	chr9:21964800-21965800	Flanking Bivalent TSS/Enh	Monocytes-CD14+_RO01746	blood
42	chr9:21964800-21966000	Bivalent/Poised TSS	HUES48 Cell Line	embryonic stem cell
43	chr9:21964800-21966000	Bivalent Enhancer	Primary T helper memory cells from peripheral blood 1	blood
44	chr9:21964800-21966400	Bivalent/Poised TSS	H9 Cell Line	embryonic stem cell
45	chr9:21965000-21965200	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
46	chr9:21965000-21965200	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
47	chr9:21965000-21965200	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
48	chr9:21965000-21965200	Bivalent/Poised TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
49	chr9:21965000-21965200	Bivalent Enhancer	Breast Myoepithelial Primary Cells	Breast
50	chr9:21965000-21965200	Bivalent Enhancer	Primary B cells from cord blood	blood

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