No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs181095410 |
chr12:26110501-26110502 |
Active TSS Enhancers Weak transcription Flanking Active TSS
|
TF binding regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs113219994 |
chr12:26110518-26110519 |
Active TSS Enhancers Weak transcription Flanking Active TSS
|
TF binding regionCpG islandlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs185903838 |
chr12:26110547-26110548 |
Active TSS Enhancers Weak transcription Flanking Active TSS
|
TF binding regionCpG island
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs552048701 |
chr12:26110565-26110566 |
Active TSS Enhancers Weak transcription Flanking Active TSS
|
TF binding regionCpG island
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs12424238 |
chr12:26110610-26110611 |
Active TSS Flanking Active TSS Weak transcription Enhancers
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
mRNA abundance
|
6 |
rs556239224 |
chr12:26110616-26110617 |
Active TSS Flanking Active TSS Weak transcription Enhancers
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs375107653 |
chr12:26110617-26110618 |
Active TSS Flanking Active TSS Weak transcription Enhancers
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs374839856 |
chr12:26110642-26110643 |
Active TSS Flanking Active TSS Weak transcription Enhancers
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs535075234 |
chr12:26110653-26110654 |
Active TSS Flanking Active TSS Weak transcription Enhancers
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs73074872 |
chr12:26110681-26110682 |
Active TSS Flanking Active TSS Weak transcription Enhancers
|
TF binding regionCpG island
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
11 |
rs568458133 |
chr12:26110735-26110736 |
Active TSS Flanking Active TSS Weak transcription Enhancers
|
TF binding regionCpG island
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs190361746 |
chr12:26110747-26110748 |
Active TSS Flanking Active TSS Weak transcription Enhancers
|
TF binding regionCpG island
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs183349828 |
chr12:26110769-26110770 |
Active TSS Flanking Active TSS Weak transcription Enhancers
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs565843363 |
chr12:26110787-26110788 |
Active TSS Flanking Active TSS Weak transcription Enhancers
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs540039733 |
chr12:26110849-26110850 |
Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs3803010 |
chr12:26110876-26110877 |
Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs35639226 |
chr12:26110877-26110878 |
Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs187854934 |
chr12:26110888-26110889 |
Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs150454961 |
chr12:26110903-26110904 |
Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs552583074 |
chr12:26110919-26110920 |
Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs539263776 |
chr12:26110934-26110935 |
Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs145373780 |
chr12:26110955-26110956 |
Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs141579938 |
chr12:26110978-26110979 |
Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs541394478 |
chr12:26110988-26110989 |
Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs376164641 |
chr12:26111000-26111001 |
Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS ZNF genes & repeats
|
TF binding regionChromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs563804132 |
chr12:26111117-26111118 |
Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats
|
TF binding regionChromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs79213154 |
chr12:26111125-26111126 |
Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats
|
TF binding regionChromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs530673580 |
chr12:26111134-26111135 |
Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats
|
TF binding regionChromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs545983768 |
chr12:26111161-26111162 |
Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats
|
TF binding regionChromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs370247893 |
chr12:26111179-26111180 |
Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs528639952 |
chr12:26111193-26111194 |
Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs547101810 |
chr12:26111221-26111222 |
Active TSS Flanking Active TSS Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs568496917 |
chr12:26111286-26111287 |
Active TSS Flanking Active TSS Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription
|
TF binding regionChromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs149047907 |
chr12:26111293-26111294 |
Active TSS Flanking Active TSS Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription
|
TF binding regionChromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs550666020 |
chr12:26111318-26111319 |
Active TSS Flanking Active TSS Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription
|
TF binding regionChromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs569543743 |
chr12:26111393-26111394 |
Active TSS Flanking Active TSS Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs533183570 |
chr12:26111567-26111568 |
Active TSS Weak transcription Enhancers Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs555340450 |
chr12:26111571-26111572 |
Active TSS Weak transcription Enhancers Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs706519 |
chr12:26111576-26111577 |
Active TSS Weak transcription Enhancers Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs539739864 |
chr12:26111648-26111649 |
Active TSS Weak transcription Enhancers Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs113005451 |
chr12:26111693-26111694 |
Active TSS Weak transcription Enhancers Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs558370652 |
chr12:26111695-26111696 |
Active TSS Weak transcription Enhancers Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs143079346 |
chr12:26111740-26111741 |
Active TSS Weak transcription Enhancers Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs706520 |
chr12:26111780-26111781 |
Active TSS Weak transcription Enhancers Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs552669575 |
chr12:26111905-26111906 |
Active TSS Weak transcription Enhancers Bivalent/Poised TSS
|
TF binding regionChromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs3741544 |
chr12:26111923-26111924 |
Active TSS Weak transcription Enhancers Bivalent/Poised TSS
|
TF binding regionChromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs558048169 |
chr12:26111941-26111942 |
Active TSS Weak transcription Enhancers Bivalent/Poised TSS
|
TF binding regionChromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs556640699 |
chr12:26111963-26111964 |
Active TSS Weak transcription Enhancers Bivalent/Poised TSS
|
TF binding regionChromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs575544437 |
chr12:26112062-26112063 |
Active TSS Weak transcription Flanking Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs117899401 |
chr12:26112098-26112099 |
Active TSS Weak transcription Flanking Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|