Variant report

Variant	esv3366930
Chromosome Location	chr6:76715232-76717330
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 88 )
Associated
traits (count: 99 )

Variant overlapped rSNPs/rCNVs (count:88 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs184144177	chr6:76715263-76715264	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs372125949	chr6:76715297-76715298	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs17802616	chr6:76715299-76715300	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
4	rs186967746	chr6:76715325-76715326	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs540417687	chr6:76715327-76715328	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs567000832	chr6:76715340-76715341	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs565079339	chr6:76715342-76715343	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs367940763	chr6:76715362-76715363	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs576997575	chr6:76715382-76715383	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs544470659	chr6:76715422-76715423	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs562413051	chr6:76715424-76715425	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs371863748	chr6:76715443-76715444	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs191742984	chr6:76715493-76715494	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs117784469	chr6:76715542-76715543	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs547740348	chr6:76715544-76715545	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs201341822	chr6:76715545-76715546	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs376445102	chr6:76715556-76715557	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs552549267	chr6:76715561-76715562	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs184293776	chr6:76715580-76715581	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs569042603	chr6:76715612-76715613	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs372070213	chr6:76715652-76715653	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs376466211	chr6:76715690-76715691	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs550826291	chr6:76715701-76715702	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs372947806	chr6:76715779-76715780	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs552022071	chr6:76715819-76715820	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs78922320	chr6:76715850-76715851	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs538830004	chr6:76715874-76715875	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs7761523	chr6:76715900-76715901	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
29	rs569532218	chr6:76715925-76715926	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs1926098	chr6:76715926-76715927	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
31	rs538557306	chr6:76715932-76715933	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs573314261	chr6:76715955-76715956	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs534283277	chr6:76715967-76715968	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs556763208	chr6:76716034-76716035	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs558809257	chr6:76716060-76716061	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs142517739	chr6:76716065-76716066	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs544040491	chr6:76716093-76716094	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs568656756	chr6:76716096-76716097	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs566781214	chr6:76716137-76716138	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs11272555	chr6:76716173-76716174	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs71002782	chr6:76716182-76716183	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs2490776	chr6:76716196-76716197	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs555946623	chr6:76716215-76716216	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs574391443	chr6:76716236-76716237	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs541765254	chr6:76716237-76716238	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs557341296	chr6:76716246-76716247	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs138262601	chr6:76716266-76716267	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs188984086	chr6:76716267-76716268	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs535404926	chr6:76716268-76716269	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs545806303	chr6:76716278-76716279	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:99)

Disease	PMID	Source
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Autism	22495311	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Gastric cancer	17908304	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Neuroblastoma	18923191	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	17603634	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Systemic lupus erythematosus	17503323	CNVD
Melanoma	18172304	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Cancer	21637783	CNVD
Colorectal cancer	16272173	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
T-cell lymphomas	19863542	CNVD
Lung cancer	18438408	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	19010834	CNVD
Non-small cell lung cancer	21044232	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21385341	CNVD
Prostate cancer	16705090	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Ependymoma	16718352	CNVD
High-proliferative meningiomas	17937814	CNVD
Intracranial tumor	16823260	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Prostate cancer	16573809	CNVD
Breast cancer	16272173	CNVD
small cell lung cancer	20016488	CNVD
Prostate cancer	18632612	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Urothelial carcinoma	18382360	CNVD
Ovarian neoplasms	16753589	CNVD
Hepatocellular carcinoma	16750200	CNVD
Wilms tumour	21544195	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Follicular lymphoma	17699855	CNVD
Breast cancer	17133270	CNVD
Leukemia	18688285	CNVD
Prostate cancer	19242612	CNVD
Developmental delay	21147756	CNVD
Glioma	21046410	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Zellweger syndrome	21572526	CNVD
Follicular lymphoma	20505157	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Malignant melanoma	18718029	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Lung adenocarcinoma	21935476	CNVD
Breast cancer	21364760	CNVD
Myelofibrosis	22110671	CNVD
Salivary gland tumor	18059337	CNVD
Lung cancer	16773561	CNVD
Glioblastoma multiforme	22286061	CNVD
Urothelial cell carcinoma	18451213	CNVD
Prostate cancer	16461572	CNVD
Mental retardation	21045960	CNVD
Obesity	21045960	CNVD
learning difficulties	21045960	CNVD
Prostate cancer	17245344	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Cancer	20164920	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:76712600-76732800	Weak transcription	Pancreas	Pancrea

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