Variant report

Variant	esv3367027
Chromosome Location	chr6:86708515-86715482
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 114 )
Associated
traits (count: 104 )

Variant overlapped rSNPs/rCNVs (count:114 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs182845398	chr6:86708549-86708550	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs539086754	chr6:86708558-86708559	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs558244176	chr6:86708585-86708586	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs148923339	chr6:86708638-86708639	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs79641399	chr6:86708640-86708641	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs76918680	chr6:86708643-86708644	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs75444605	chr6:86708650-86708651	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs79292982	chr6:86708653-86708654	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs77946558	chr6:86708656-86708657	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs75089790	chr6:86708661-86708662	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs77155796	chr6:86708662-86708663	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs78051047	chr6:86708665-86708666	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs80139806	chr6:86708667-86708668	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs78029047	chr6:86708668-86708669	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs74757056	chr6:86708670-86708671	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs77183286	chr6:86708675-86708676	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs578155946	chr6:86708676-86708677	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs79524439	chr6:86708680-86708681	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs76128513	chr6:86708684-86708685	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs186555323	chr6:86708692-86708693	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs544005026	chr6:86708694-86708695	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs191406075	chr6:86708695-86708696	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs74704380	chr6:86708697-86708698	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs78299686	chr6:86708698-86708699	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs79482849	chr6:86708703-86708704	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs77282497	chr6:86708730-86708731	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs555133678	chr6:86708731-86708732	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs75940342	chr6:86708736-86708737	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs76120692	chr6:86708751-86708752	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs375941678	chr6:86708764-86708765	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs548578321	chr6:86708772-86708773	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs77151311	chr6:86708777-86708778	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs370297719	chr6:86708811-86708812	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs6934037	chr6:86708834-86708835	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs6934038	chr6:86708836-86708837	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs574186052	chr6:86708910-86708911	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs538005810	chr6:86708912-86708913	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs377041566	chr6:86708922-86708923	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs374201049	chr6:86708950-86708951	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs531085109	chr6:86709012-86709013	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs552391766	chr6:86709029-86709030	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs375280373	chr6:86709034-86709035	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs570917929	chr6:86709043-86709044	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs534746088	chr6:86709046-86709047	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs371797390	chr6:86709056-86709057	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs546952942	chr6:86709061-86709062	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs368754612	chr6:86709077-86709078	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs199563870	chr6:86709088-86709089	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs200781369	chr6:86709100-86709101	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs62445043	chr6:86709126-86709127	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:104)

Disease	PMID	Source
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Autism	22495311	CNVD
Gastric cancer	17908304	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Neuroblastoma	18923191	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	17603634	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Systemic lupus erythematosus	17503323	CNVD
Melanoma	18172304	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Cancer	21637783	CNVD
Colorectal cancer	16272173	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
T-cell lymphomas	19863542	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	19010834	CNVD
Non-small cell lung cancer	21044232	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21385341	CNVD
Prostate cancer	16705090	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Ependymoma	16718352	CNVD
High-proliferative meningiomas	17937814	CNVD
Intracranial tumor	16823260	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Prostate cancer	16573809	CNVD
Breast cancer	16272173	CNVD
small cell lung cancer	20016488	CNVD
Prostate cancer	18632612	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Urothelial carcinoma	18382360	CNVD
Ovarian neoplasms	16753589	CNVD
Hepatocellular carcinoma	16750200	CNVD
Wilms tumour	21544195	CNVD
Follicular lymphoma	17699855	CNVD
Breast cancer	17133270	CNVD
Leukemia	18688285	CNVD
Prostate cancer	19242612	CNVD
Glioma	21046410	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Zellweger syndrome	21572526	CNVD
Follicular lymphoma	20505157	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Malignant melanoma	18718029	CNVD
Lung adenocarcinoma	21935476	CNVD
Prostate cancer	16461572	CNVD
Mental retardation	21045960	CNVD
Obesity	21045960	CNVD
learning difficulties	21045960	CNVD
Prostate cancer	17245344	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Cancer	20164920	CNVD
Burkitt''s lymphoma	20823134	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
Acute lymphoblastic leukemia	17640729	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Chondromyxoid Fibroma	20696777	CNVD
Cancer	21183584	CNVD
craniofacial dysmorphism	21918468	CNVD
Myelofibrosis	22110671	CNVD
Neurodevelopmental disorder	22521361	CNVD
abnormal development	18461090	CNVD
Myelodysplastic syndrome	18508791	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Breast cancer	21364760	CNVD
Schizophrenia	20967226	CNVD

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:86702400-86712800	Weak transcription	Ovary	ovary

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