No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs566702639 |
chr17:33699557-33699558 |
Weak transcription Active TSS Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
2 |
rs534455467 |
chr17:33699586-33699587 |
Weak transcription Active TSS Enhancers Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
3 |
rs538444349 |
chr17:33699602-33699603 |
Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
4 |
rs558845306 |
chr17:33699608-33699609 |
Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
5 |
rs1913544 |
chr17:33699635-33699636 |
Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
6 |
rs4796079 |
chr17:33699650-33699651 |
Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
7 |
rs144409051 |
chr17:33699661-33699662 |
Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
8 |
rs557361390 |
chr17:33699677-33699678 |
Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
9 |
rs574193367 |
chr17:33699705-33699706 |
Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
10 |
rs8082408 |
chr17:33699718-33699719 |
Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
11 |
rs72825961 |
chr17:33699736-33699737 |
Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
12 |
rs8078071 |
chr17:33699772-33699773 |
Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
13 |
rs575509666 |
chr17:33699792-33699793 |
Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
14 |
rs545257781 |
chr17:33699815-33699816 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Flanking Active TSS Enhancers Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
15 |
rs371312052 |
chr17:33699818-33699819 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Flanking Active TSS Enhancers Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
16 |
rs12941857 |
chr17:33699833-33699834 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Flanking Active TSS Enhancers Weak transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
17 |
rs546051196 |
chr17:33699840-33699841 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Flanking Active TSS Enhancers Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
18 |
rs531075737 |
chr17:33699878-33699879 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Flanking Active TSS Enhancers Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
19 |
rs550170181 |
chr17:33699900-33699901 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Flanking Active TSS Enhancers Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
20 |
rs563756961 |
chr17:33699914-33699915 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Flanking Active TSS Enhancers Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
21 |
rs560500983 |
chr17:33700044-33700045 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
22 |
rs529634785 |
chr17:33700055-33700056 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
23 |
rs546326904 |
chr17:33700112-33700113 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
24 |
rs884018 |
chr17:33700162-33700163 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Enhancers
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
25 |
rs538853433 |
chr17:33700179-33700180 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
26 |
rs186359896 |
chr17:33700181-33700182 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
27 |
rs114442143 |
chr17:33700186-33700187 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
28 |
rs201554722 |
chr17:33700244-33700245 |
Bivalent/Poised TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
29 |
rs538100325 |
chr17:33700303-33700304 |
Bivalent/Poised TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
30 |
rs112268471 |
chr17:33700341-33700342 |
Bivalent/Poised TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
31 |
rs557397655 |
chr17:33700361-33700362 |
Bivalent/Poised TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs116430594 |
chr17:33700404-33700405 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs536639203 |
chr17:33700447-33700448 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs66756976 |
chr17:33700470-33700471 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer
|
Chromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
35 |
rs530909773 |
chr17:33700493-33700494 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs376453757 |
chr17:33700496-33700497 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs545597832 |
chr17:33700501-33700502 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs9303685 |
chr17:33700578-33700579 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
39 |
rs575896600 |
chr17:33700584-33700585 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs544549078 |
chr17:33700608-33700609 |
Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Transcr. at gene 5' and 3'
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs12944176 |
chr17:33700618-33700619 |
Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Transcr. at gene 5' and 3'
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
42 |
rs189926971 |
chr17:33700694-33700695 |
Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs539818681 |
chr17:33700696-33700697 |
Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs560216619 |
chr17:33700708-33700709 |
Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs56021229 |
chr17:33700731-33700732 |
Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
46 |
rs144060839 |
chr17:33700756-33700757 |
Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs552361003 |
chr17:33700772-33700773 |
Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs12944726 |
chr17:33700787-33700788 |
Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
49 |
rs531531923 |
chr17:33700817-33700818 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs61358706 |
chr17:33700830-33700831 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|