Variant report

Variant	esv3367843
Chromosome Location	chr16:33917604-33973657
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:6555)
CpG islands
(count:2991)
Chromatin interactive
region (count:159)
LncRNA
region (count:3)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:6555 , 50 per page) page: 1 2 3 4 5 6 7 ... 132

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr16:33945691-33946332	K562	blood:	n/a	n/a
2	ARID3A	chr16:33958282-33959785	K562	blood:	n/a	n/a
3	ARID3A	chr16:33941019-33941023	K562	blood:	n/a	n/a
4	ARID3A	chr16:33960368-33961487	HepG2	liver:	n/a	n/a
5	ARID3A	chr16:33962893-33964420	K562	blood:	n/a	n/a
6	ARID3A	chr16:33936245-33936276	HepG2	liver:	n/a	n/a
7	ARID3A	chr16:33947476-33947858	K562	blood:	n/a	n/a
8	ARID3A	chr16:33962896-33964273	HepG2	liver:	n/a	n/a
9	ARID3A	chr16:33955044-33957934	K562	blood:	n/a	n/a
10	ARID3A	chr16:33954207-33954728	K562	blood:	n/a	n/a
11	ARID3A	chr16:33964513-33966330	HepG2	liver:	n/a	n/a
12	ARID3A	chr16:33935449-33935491	HepG2	liver:	n/a	n/a
13	ARID3A	chr16:33952173-33953799	K562	blood:	n/a	n/a
14	ARID3A	chr16:33960210-33961488	K562	blood:	n/a	n/a
15	ARID3A	chr16:33958278-33959783	HepG2	liver:	n/a	n/a
16	ARID3A	chr16:33964706-33966039	K562	blood:	n/a	n/a
17	ARID3A	chr16:33943175-33943309	HepG2	liver:	n/a	n/a
18	ATF1	chr16:33956301-33958052	K562	blood:	n/a	n/a
19	ATF1	chr16:33973569-33973930	K562	blood:	n/a	n/a
20	ATF1	chr16:33967674-33967696	K562	blood:	n/a	n/a
21	ATF1	chr16:33962891-33964418	K562	blood:	n/a	n/a
22	ATF1	chr16:33968378-33968581	K562	blood:	n/a	n/a
23	ATF1	chr16:33955043-33956019	K562	blood:	n/a	n/a
24	ATF1	chr16:33924264-33925102	K562	blood:	n/a	n/a
25	ATF1	chr16:33952165-33953795	K562	blood:	n/a	n/a
26	ATF1	chr16:33942494-33942869	K562	blood:	n/a	n/a
27	ATF1	chr16:33922881-33923692	K562	blood:	n/a	n/a
28	ATF1	chr16:33945681-33946253	K562	blood:	n/a	n/a
29	ATF1	chr16:33947663-33948001	K562	blood:	n/a	n/a
30	ATF1	chr16:33926058-33926523	K562	blood:	n/a	n/a
31	ATF1	chr16:33958276-33959793	K562	blood:	n/a	n/a
32	ATF1	chr16:33970969-33971315	K562	blood:	n/a	n/a
33	ATF1	chr16:33972180-33973058	K562	blood:	n/a	n/a
34	ATF1	chr16:33960215-33961326	K562	blood:	n/a	n/a
35	ATF1	chr16:33950018-33951511	K562	blood:	n/a	n/a
36	ATF1	chr16:33933114-33934790	K562	blood:	n/a	n/a
37	ATF1	chr16:33940512-33940714	K562	blood:	n/a	n/a
38	ATF1	chr16:33941402-33941555	K562	blood:	n/a	n/a
39	ATF1	chr16:33954192-33954783	K562	blood:	n/a	n/a
40	ATF2	chr16:33952910-33953517	GM12878	blood:	n/a	n/a
41	ATF2	chr16:33962927-33964315	GM12878	blood:	n/a	n/a
42	ATF2	chr16:33962966-33964217	GM12878	blood:	n/a	n/a
43	ATF2	chr16:33962889-33964272	H1-hESC	embryonic stem cell:	n/a	n/a
44	ATF2	chr16:33962931-33964214	H1-hESC	embryonic stem cell:	n/a	n/a
45	ATF3	chr16:33962852-33964220	H1-hESC	embryonic stem cell:	n/a	n/a
46	ATF3	chr16:33958303-33958826	HepG2	liver:	n/a	n/a
47	ATF3	chr16:33957033-33957912	HepG2	liver:	n/a	chr16:33957162-33957172 chr16:33957159-33957172 chr16:33957158-33957173 chr16:33957161-33957169 chr16:33957159-33957170 chr16:33957162-33957172 chr16:33957162-33957170 chr16:33957162-33957169 chr16:33957159-33957172
48	ATF3	chr16:33953092-33953253	GM12878	blood:	n/a	n/a
49	ATF3	chr16:33963037-33963475	K562	blood:	n/a	n/a
50	ATF3	chr16:33955548-33956006	HepG2	liver:	n/a	n/a

(count:2991 , 50 per page) page: 1 2 3 4 5 6 7 ... 60

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr16:33965879-33965929	NT2-D1	testis:	n/a
2	chr16:33935427-33935477	PFSK-1	brain:	n/a
3	chr16:33965879-33965929	NT2-D1	testis:	n/a
4	chr16:33935427-33935477	PFSK-1	brain:	n/a
5	chr16:33957271-33957321	PANC-1	pancreas:	n/a
6	chr16:33956603-33956653	PFSK-1	brain:	n/a
7	chr16:33966494-33966544	BJ	skin:	n/a
8	chr16:33937240-33937290	ProgFib	skin:	n/a
9	chr16:33938487-33938537	HAEpiC	amniotic membrane:	n/a
10	chr16:33935427-33935477	LNCaP	prostate:	n/a
11	chr16:33945328-33945378	GM12878	blood:	n/a
12	chr16:33965435-33965485	HRE	kidney:	n/a
13	chr16:33935224-33935274	T-47D	breast:	n/a
14	chr16:33939550-33939600	SKMC	muscle:	n/a
15	chr16:33965255-33965305	GM12891	blood:	n/a
16	chr16:33949584-33949634	Hepatocyte	liver:	n/a
17	chr16:33942523-33942573	NHBE	bronchial:	n/a
18	chr16:33948806-33948856	HNPCEpiC	eye:	n/a
19	chr16:33948806-33948856	Caco-2	colon:	n/a
20	chr16:33965573-33965623	SKMC	muscle:	n/a
21	chr16:33938487-33938537	SK-N-SH	brain:	n/a
22	chr16:33965435-33965485	Hela-S3	cervix:	n/a
23	chr16:33965573-33965623	GM12891	blood:	n/a
24	chr16:33948885-33948935	SAEC	small airway:	n/a
25	chr16:33966494-33966544	HL-60	blood:	n/a
26	chr16:33964200-33964250	MCF-7	breast:	n/a
27	chr16:33943412-33943462	HPAEpiC	pulmonary alveolar:	n/a
28	chr16:33964783-33964833	A549	lung:	n/a
29	chr16:33945328-33945378	HNPCEpiC	eye:	n/a
30	chr16:33963216-33963266	HPAEpiC	pulmonary alveolar:	n/a
31	chr16:33945328-33945378	Jurkat	blood:	n/a
32	chr16:33938487-33938537	NT2-D1	testis:	n/a
33	chr16:33942523-33942573	MCF10A-Er-Src	breast:	n/a
34	chr16:33961517-33961567	GM12892	blood:	n/a
35	chr16:33959595-33959645	ProgFib	skin:	n/a
36	chr16:33965255-33965305	BE2_C	brain:	n/a
37	chr16:33948849-33948899	PANC-1	pancreas:	n/a
38	chr16:33963216-33963266	GM12892	blood:	n/a
39	chr16:33959409-33959459	NHBE	bronchial:	n/a
40	chr16:33961515-33961565	ProgFib	skin:	n/a
41	chr16:33939081-33939131	BE2_C	brain:	n/a
42	chr16:33939081-33939131	HEK293	kidney:	embryo
43	chr16:33964783-33964833	NB4	blood:	n/a
44	chr16:33956603-33956653	AG04449	skin:	fetal
45	chr16:33939550-33939600	HIPEpiC	eye:	n/a
46	chr16:33936627-33936677	HEK293	kidney:	embryo
47	chr16:33963473-33963523	Jurkat	blood:	n/a
48	chr16:33957271-33957321	HUVEC	blood vessel:	n/a
49	chr16:33938487-33938537	HCM	heart:	n/a
50	chr16:33966494-33966544	H1-hESC	embryonic stem cell:	embryo

(count:159 , 50 per page) page: 1 2 3 4

No.	Distal block	Cell Line	Cell type
1	chr16:33959008..33959740-chr2:133023202..133023717,2	MCF-7	breast:
2	chr12:20703919..20704937-chr16:33963436..33964235,5	MCF-7	breast:
3	chr16:33955361..33957320-chr21:9825635..9828856,3	MCF-7	breast:
4	chr1:204530942..204531922-chr16:33934847..33935468,2	MCF-7	breast:
5	chr16:33959013..33960783-chr17:21284023..21285523,2	MCF-7	breast:
6	chr16:33963159..33963977-chr21:9825413..9825941,2	MCF-7	breast:
7	chr16:33934779..33935463-chr4:41938365..41938885,3	MCF-7	breast:
8	chr12:38444806..38446368-chr16:33959419..33960990,2	MCF-7	breast:
9	chr16:33962594..33963953-chr21:9825062..9826789,10	MCF-7	breast:
10	chr16:33951094..33954926-chr2:133029316..133031796,4	K562	blood:
11	chr16:33957999..33960795-chr2:133021474..133023187,2	K562	blood:
12	chr16:33956479..33957946-chr2:133025178..133026405,11	MCF-7	breast:
13	chr16:33934184..33936917-chr16:33937147..33938891,2	MCF-7	breast:
14	chr16:33960797..33961973-chr2:133014348..133015268,4	MCF-7	breast:
15	chr16:33962974..33964644-chr2:133011974..133013442,13	MCF-7	breast:
16	chr16:33962584..33963354-chr2:133014717..133015279,2	MCF-7	breast:
17	chr11:57507971..57508491-chr16:33956727..33957366,3	MCF-7	breast:
18	chr16:14580478..14581474-chr16:33949673..33950197,2	MCF-7	breast:
19	chr12:38444887..38445591-chr16:33959228..33959997,3	MCF-7	breast:
20	chr16:33939878..33940836-chr8:52730956..52731844,2	MCF-7	breast:
21	chr16:33959224..33959998-chr2:133022949..133023703,3	MCF-7	breast:
22	chr16:33948684..33951829-chr2:133031777..133034583,5	MCF-7	breast:
23	chr12:127649114..127650896-chr16:33956470..33958618,2	K562	blood:
24	chr16:33959785..33961294-chr2:133013691..133015259,2	K562	blood:
25	chr16:33965457..33966053-chr18:74799776..74800776,2	MCF-7	breast:
26	chr16:33940388..33941168-chr8:52731029..52731940,3	MCF-7	breast:
27	chr16:33952703..33953232-chr2:133029675..133030305,3	MCF-7	breast:
28	chr16:33960878..33961871-chr20:26188853..26189656,7	MCF-7	breast:
29	chr12:34427757..34428277-chr16:33958747..33959470,2	MCF-7	breast:
30	chr16:33963452..33965034-chr17:76921426..76922946,2	K562	blood:
31	chr16:33961611..33967347-chr2:133008818..133014443,19	K562	blood:
32	chr16:33952711..33953408-chr2:133029774..133030301,2	MCF-7	breast:
33	chr16:33960780..33961953-chr20:26188513..26190294,8	MCF-7	breast:
34	chr16:33955976..33956477-chr2:133025905..133026410,2	K562	blood:
35	chr16:33956590..33957780-chr2:133025048..133026320,9	MCF-7	breast:
36	chr16:33961300..33961956-chr20:26188840..26189578,6	MCF-7	breast:
37	chr12:20703904..20704960-chr16:33963177..33964348,6	MCF-7	breast:
38	chr16:33943186..33943816-chr3:75719164..75719883,2	MCF-7	breast:
39	chr12:20702878..20705910-chr16:33962644..33966081,5	K562	blood:
40	chr11:85195106..85195725-chr16:33963665..33964258,2	MCF-7	breast:
41	chr16:33963952..33966447-chr6:26233532..26235518,2	MCF-7	breast:
42	chr12:127649393..127652006-chr16:33961856..33963373,2	K562	blood:
43	chr16:33962584..33963994-chr21:9826768..9828002,25	MCF-7	breast:
44	chr16:33962887..33963658-chr7:80962606..80963603,2	MCF-7	breast:
45	chr16:33951907..33953719-chr2:133029106..133032192,3	MCF-7	breast:
46	chr16:33958834..33966480-chr2:133009904..133018933,30	MCF-7	breast:
47	chr13:36123141..36123641-chr16:33965460..33966317,2	MCF-7	breast:
48	chr16:33953270..33954082-chr2:133026230..133026906,2	MCF-7	breast:
49	chr12:34416477..34418281-chr16:33956682..33958772,3	MCF-7	breast:
50	chr16:33955972..33956886-chr2:133025802..133026709,6	MCF-7	breast:

(count:3 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CTD-2144E22.5.1-21	chr16:33946090-33946338	NONHSAT142132
2	lnc-CTD-2144E22.5.1-26	chr16:33922937-33923144	NONHSAT142126
3	lnc-CTD-2144E22.5.1-22	chr16:33945490-33945742	NONHSAT142130

No data

Variant related genes	Relation type
ENSG00000265616	TF binding region
RNA5-8SP2	TF binding region
ENSG00000262561	TF binding region
ENSG00000259987	TF binding region
PCMTD1P2	TF binding region
LINC00273	TF binding region
ENSG00000260207	TF binding region
ENSG00000261440	TF binding region
ENSG00000207986	TF binding region
ENSG00000265616	CpG island
RNA5-8SP2	CpG island
ENSG00000262561	CpG island
ENSG00000259987	CpG island
PCMTD1P2	CpG island
LINC00273	CpG island
ENSG00000260207	CpG island
ENSG00000261440	CpG island
ENSG00000207986	CpG island
ENSG00000221288	chromatin interactions
ENSG00000223514	chromatin interactions
ENSG00000264063	chromatin interactions
ENSG00000163636	chromatin interactions
ENSG00000202174	chromatin interactions
ENSG00000163046	chromatin interactions
ENSG00000264462	chromatin interactions
ENSG00000227195	chromatin interactions
ENSG00000035862	chromatin interactions
ENSG00000124575	chromatin interactions
ENSG00000164346	chromatin interactions
ENSG00000256663	chromatin interactions
ENSG00000239776	chromatin interactions
ENSG00000164347	chromatin interactions
ENSG00000200408	chromatin interactions

Extended variants
information (count: 9587 )
Associated
traits (count: 117 )

Variant overlapped rSNPs/rCNVs (count:9587 , 50 per page) page: 1 2 3 4 5 6 7 ... 192

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs370288635	chr16:33917604-33917605	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs200306365	chr16:33917608-33917609	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs74457470	chr16:33917617-33917618	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs77025787	chr16:33917627-33917628	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs550949056	chr16:33917646-33917647	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs568884880	chr16:33917652-33917653	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs540982965	chr16:33917655-33917656	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs11864358	chr16:33917659-33917660	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs200455564	chr16:33917665-33917666	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs548332144	chr16:33917675-33917676	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs566556650	chr16:33917682-33917683	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs148524303	chr16:33917685-33917686	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs147857220	chr16:33917688-33917689	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs375318687	chr16:33917690-33917691	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs533787030	chr16:33917718-33917719	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs201512146	chr16:33917722-33917723	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs149046551	chr16:33917727-33917728	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs558712782	chr16:33917731-33917732	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs200216395	chr16:33917736-33917737	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs201298701	chr16:33917737-33917738	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs199774736	chr16:33917741-33917742	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs200536129	chr16:33917742-33917743	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs142257904	chr16:33917753-33917754	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs201006461	chr16:33917761-33917762	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs111660340	chr16:33917766-33917767	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs576923097	chr16:33917771-33917772	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs538158946	chr16:33917778-33917779	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs112081463	chr16:33917780-33917781	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs556013738	chr16:33917783-33917784	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs202206675	chr16:33917791-33917792	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs374420709	chr16:33917794-33917795	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs147139000	chr16:33917795-33917796	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs202024296	chr16:33917800-33917801	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs143758375	chr16:33917811-33917812	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs575264075	chr16:33917812-33917813	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs151179119	chr16:33917813-33917814	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs113213097	chr16:33917820-33917821	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs199951799	chr16:33917825-33917826	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs111429221	chr16:33917829-33917830	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs542598602	chr16:33917832-33917833	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs561088256	chr16:33917841-33917842	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs112561328	chr16:33917845-33917846	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs113742310	chr16:33917848-33917849	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs573287250	chr16:33917854-33917855	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs540325020	chr16:33917859-33917860	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs565482218	chr16:33917862-33917863	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs367669356	chr16:33917864-33917865	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs551276556	chr16:33917866-33917867	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs201863622	chr16:33917867-33917868	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs199963134	chr16:33917882-33917883	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:117)

Disease	PMID	Source
Hodgkin''s lymphoma	20651079	CNVD
Metanephric adenoma	20802469	CNVD
Melanoma	18172304	CNVD
Breast cancer	16608533	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Lung adenocarcinoma	17086460	CNVD
Lung cancer	17086460	CNVD
Autism	22566537	CNVD
Intellectual disability	22566537	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Endometrial cancer	22040021	CNVD
Ewing''s sarcoma	21437220	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Breast cancer	21264507	CNVD
Cervical cancer	21063398	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	21080181	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Autism	19415332	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Schizophrenia	22958593	CNVD
Ductal carcinoma	22052326	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Hodgkin''s lymphoma	17606441	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Breast cancer	21858162	CNVD
Hepatocellular carcinoma	16750200	CNVD
Mental retardation	19951919	CNVD
Colorectal cancer	16272173	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	21785460	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Breast cancer	21990379	CNVD
Astrocytoma	22246337	CNVD
Myelofibrosis	22110671	CNVD
Epilepsy	22499536	CNVD
Attention deficit hyperactivity disorder	21324949	CNVD
Austim spectrum disorder	21302340	CNVD
Autism	22513405	CNVD
Autism	22958593	CNVD
Autism	18184952	CNVD
Autism	19966786	CNVD
Autism	21394203	CNVD
Autism	21969575	CNVD
Autism	22241247	CNVD
Autism	20970697	CNVD
Autism	20942916	CNVD
Epilepsy	20970697	CNVD
Intellectual disability	22045946	CNVD
Mental retardation	19966786	CNVD
Developmental delay	20808231	CNVD
Obesity	20808231	CNVD
Autism	18923514	CNVD
Obesity	21881559	CNVD
Obesity	21956041	CNVD
Autism	20659124	CNVD
Mental retardation	21062444	CNVD
Schizophrenia	20587603	CNVD
Schizophrenia	21285140	CNVD
Schizophrenia	22885689	CNVD
Schizophrenia	20553308	CNVD
Schizophrenia	20970697	CNVD
Schizophrenia	20433910	CNVD
Schizophrenia	22241247	CNVD
Autism	19242545	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Intracranial ependymoma	16609018	CNVD
Schizophrenia	21399695	CNVD
Autism	21956041	CNVD
Disorders of sex development	21048976	CNVD
Autism	22067053	CNVD
Autism	18156158	CNVD
Mental retardation	20152051	CNVD
Autism	19218893	CNVD
Autism	21289514	CNVD
Schizophrenia	19855392	CNVD
neurodevelopmental Syndrome	20503337	CNVD
Benign familial neonatal-infantile seizures	21060786	CNVD
Low-grade fibromyxoid sarcoma	0	CNVD
Cancer	21183584	CNVD
Low-grade fibromyxoid sarcoma	21536545	CNVD
Breast cancer	21045282	CNVD
Neuroblastoma	20406844	CNVD
Autism	19050728	CNVD
Epilepsy	20923578	CNVD
Psychiatric disorder	19050728	CNVD
Schizophrenia	19348701	CNVD
Attention deficit hyperactivity disorder	19097825	CNVD
Autism	20964600	CNVD
Schizophrenia	19955444	CNVD
Schizophrenia	18990708	CNVD
Schizophrenia	19571808	CNVD
Breast cancer	20409316	CNVD
Severe combined immunodeficiency	19097825	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Autism	18522746	CNVD
Wilms tumour	21544195	CNVD
Cancer	20164920	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Lung cancer	18438408	CNVD
Non-syndromic sensorineural hearing loss	22297974	CNVD

Chromatin state (count:1433 , 50 per page) page: 1 2 3 4 5 6 7 ... 29

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:33912400-33920000	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell
2	chr16:33912400-33926600	ZNF genes & repeats	HUES48 Cell Line	embryonic stem cell
3	chr16:33912800-33926600	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr16:33916400-33919000	Weak transcription	Right Atrium	heart
5	chr16:33917800-33919800	ZNF genes & repeats	Psoas Muscle	Psoas
6	chr16:33917800-33920400	ZNF genes & repeats	Duodenum Smooth Muscle	Duodenum
7	chr16:33918000-33926800	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
8	chr16:33918200-33920000	ZNF genes & repeats	Brain Hippocampus Middle	brain
9	chr16:33918400-33919800	ZNF genes & repeats	Primary T helper cells PMA-I stimulated	--
10	chr16:33918400-33920800	ZNF genes & repeats	Liver	Liver
11	chr16:33918600-33920800	ZNF genes & repeats	Adipose Nuclei	Adipose
12	chr16:33918800-33921200	ZNF genes & repeats	iPS-18 Cell Line	embryonic stem cell
13	chr16:33919000-33920000	Active TSS	Fetal Heart	heart
14	chr16:33919000-33920000	Active TSS	Right Atrium	heart
15	chr16:33920000-33922200	Weak transcription	Fetal Heart	heart
16	chr16:33920000-33922200	Weak transcription	Right Atrium	heart
17	chr16:33920800-33922000	Weak transcription	Liver	Liver
18	chr16:33921400-33926000	ZNF genes & repeats	iPS-18 Cell Line	embryonic stem cell
19	chr16:33921600-33926800	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell
20	chr16:33921800-33923800	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
21	chr16:33921800-33925000	ZNF genes & repeats	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
22	chr16:33921800-33925000	ZNF genes & repeats	Duodenum Mucosa	Duodenum
23	chr16:33921800-33925000	ZNF genes & repeats	Monocytes-CD14+_RO01746	blood
24	chr16:33921800-33926600	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell
25	chr16:33922000-33923200	ZNF genes & repeats	Thymus	Thymus
26	chr16:33922000-33923400	ZNF genes & repeats	H1 Derived Mesenchymal Stem Cells	ES cell derived
27	chr16:33922000-33923400	ZNF genes & repeats	Colon Smooth Muscle	Colon
28	chr16:33922000-33923400	ZNF genes & repeats	Stomach Smooth Muscle	stomach
29	chr16:33922000-33923600	ZNF genes & repeats	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
30	chr16:33922000-33923600	ZNF genes & repeats	Liver	Liver
31	chr16:33922000-33923600	ZNF genes & repeats	Brain Anterior Caudate	brain
32	chr16:33922000-33923600	ZNF genes & repeats	Brain Hippocampus Middle	brain
33	chr16:33922000-33923600	ZNF genes & repeats	Brain Dorsolateral Prefrontal Cortex	brain
34	chr16:33922000-33923600	ZNF genes & repeats	Fetal Muscle Trunk	muscle
35	chr16:33922000-33923600	ZNF genes & repeats	Rectal Smooth Muscle	rectum
36	chr16:33922000-33924000	ZNF genes & repeats	Fetal Lung	lung
37	chr16:33922000-33925000	ZNF genes & repeats	Duodenum Smooth Muscle	Duodenum
38	chr16:33922000-33925200	ZNF genes & repeats	H1 Cell Line	embryonic stem cell
39	chr16:33922000-33925200	ZNF genes & repeats	iPS-15b Cell Line	embryonic stem cell
40	chr16:33922000-33925200	ZNF genes & repeats	Adipose Nuclei	Adipose
41	chr16:33922000-33925600	ZNF genes & repeats	Primary T cells from cord blood	blood
42	chr16:33922000-33925600	ZNF genes & repeats	Fetal Brain Male	brain
43	chr16:33922200-33923000	ZNF genes & repeats	Foreskin Melanocyte Primary Cells skin01	Skin
44	chr16:33922200-33923000	ZNF genes & repeats	Skeletal Muscle Male	skeletal muscle
45	chr16:33922200-33923200	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
46	chr16:33922200-33923200	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
47	chr16:33922200-33923200	ZNF genes & repeats	Aorta	Aorta
48	chr16:33922200-33923200	ZNF genes & repeats	Esophagus	oesophagus
49	chr16:33922200-33923200	ZNF genes & repeats	Gastric	stomach
50	chr16:33922200-33923200	ZNF genes & repeats	Lung	lung

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links