No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs559978106 |
chr6:4134920-4134921 |
Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs532022776 |
chr6:4134931-4134932 |
Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs545395304 |
chr6:4134995-4134996 |
Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs566031030 |
chr6:4135087-4135088 |
Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs3789215 |
chr6:4135096-4135097 |
Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
6 |
rs188842300 |
chr6:4135132-4135133 |
Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs557538624 |
chr6:4135159-4135160 |
Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs530270174 |
chr6:4135162-4135163 |
Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs547325362 |
chr6:4135206-4135207 |
Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs35071107 |
chr6:4135225-4135226 |
Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
11 |
rs147511679 |
chr6:4135235-4135236 |
Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs539081150 |
chr6:4135247-4135248 |
Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs45529732 |
chr6:4135262-4135263 |
Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
14 |
rs569283699 |
chr6:4135319-4135320 |
Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs538350240 |
chr6:4135326-4135327 |
Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs3804317 |
chr6:4135342-4135343 |
Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
17 |
rs574303613 |
chr6:4135344-4135345 |
Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs62394205 |
chr6:4135396-4135397 |
Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs540031402 |
chr6:4135447-4135448 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs553700065 |
chr6:4135485-4135486 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs576707838 |
chr6:4135488-4135489 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs545516294 |
chr6:4135501-4135502 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs562519220 |
chr6:4135529-4135530 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs531180504 |
chr6:4135552-4135553 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs377026780 |
chr6:4135553-4135554 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs561586478 |
chr6:4135566-4135567 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs530357967 |
chr6:4135615-4135616 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs534941701 |
chr6:4135644-4135645 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs372051217 |
chr6:4135649-4135650 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs567200034 |
chr6:4135650-4135651 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs532835655 |
chr6:4135660-4135661 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive regionlncRNA
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs552558012 |
chr6:4135690-4135691 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive regionlncRNA
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs6910963 |
chr6:4135716-4135717 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive regionlncRNA
|
12 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
34 |
rs377382757 |
chr6:4135728-4135729 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive regionlncRNA
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs6910984 |
chr6:4135754-4135755 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs11549819 |
chr6:4135758-4135759 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs369145992 |
chr6:4135765-4135766 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs28510878 |
chr6:4135805-4135806 |
Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
12 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
39 |
rs199968749 |
chr6:4135812-4135813 |
Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs563097686 |
chr6:4135818-4135819 |
Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs576594562 |
chr6:4135822-4135823 |
Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs539743313 |
chr6:4135826-4135827 |
Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs374200875 |
chr6:4135831-4135832 |
Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs568312903 |
chr6:4135837-4135838 |
Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs575996598 |
chr6:4135840-4135841 |
Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs193227225 |
chr6:4135841-4135842 |
Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs561812608 |
chr6:4135874-4135875 |
Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs572149276 |
chr6:4135908-4135909 |
Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs540861129 |
chr6:4135912-4135913 |
Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
11 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs560680585 |
chr6:4136055-4136056 |
Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
10 gene(s)
|
Overlapped CNVs
|
n/a
|