Variant report

Variant	esv3370204
Chromosome Location	chr13:93867723-93867957
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr13:93866502..93868671-chr13:93869207..93871495,2	K562	blood:
2	chr13:93865733..93868026-chr13:93879427..93882224,2	K562	blood:

Extended variants
information (count: 18 )
Associated
traits (count: 84 )

Variant overlapped rSNPs/rCNVs (count:18 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs368654488	chr13:93867757-93867758	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs61963715	chr13:93867787-93867788	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs142631656	chr13:93867788-93867789	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs61963716	chr13:93867791-93867792	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs111670111	chr13:93867794-93867795	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs146040642	chr13:93867795-93867796	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs3073914	chr13:93867796-93867797	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs366378	chr13:93867838-93867839	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
9	rs549402077	chr13:93867842-93867843	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs2004191	chr13:93867845-93867846	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs551443122	chr13:93867855-93867856	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs112936720	chr13:93867903-93867904	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs535010736	chr13:93867925-93867926	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs111253495	chr13:93867935-93867936	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs558319828	chr13:93867936-93867937	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs113453405	chr13:93867938-93867939	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs112073381	chr13:93867941-93867942	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs113539444	chr13:93867951-93867952	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:84)

Disease	PMID	Source
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	21080181	CNVD
HIV/AIDS	22032296	CNVD
Prostate cancer	16705090	CNVD
High-proliferative meningiomas	17937814	CNVD
Cancer	20164919	CNVD
Autism	22495311	CNVD
Chordoma	21602918	CNVD
Bladder cancer	21949216	CNVD
Acute myeloid leukemia	16864856	CNVD
Burkitt''s lymphoma	18698080	CNVD
Cancer	21637783	CNVD
Medulloblastoma	21979893	CNVD
Chronic lymphocytic leukemia	21518781	CNVD
colon cancer	17210682	CNVD
Endometrial cancer	22040021	CNVD
Colorectal cancer	20709793	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Ovarian cancer	20844748	CNVD
Colorectal cancer	19359472	CNVD
Intracranial aneurysm	19064780	CNVD
Breast cancer	19287154	CNVD
Acute myeloid leukemia	18379011	CNVD
Human rectal carcinomas	16397240	CNVD
Olfactory neuroblastoma	18408657	CNVD
Multiple myeloma	17077331	CNVD
Ependymoma	16718352	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Colorectal cancer	16272173	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Breast cancer	16608533	CNVD
Neuroblastoma	18923191	CNVD
Ovarian cancer	22174824	CNVD
Myoepithelioma	18604193	CNVD
Breast cancer	17133270	CNVD
Prostate cancer	18632612	CNVD
Melanoma	18172304	CNVD
Prostate cancer	16573809	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Basal cell lymphoma	17053054	CNVD
Metanephric adenoma	20802469	CNVD
Gastric cancer	17908304	CNVD
Splenic marginal zone lymphoma	18492102	CNVD
Liposarcoma	21253554	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Acute myeloid leukemia	20729466	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Esophageal cancer	21851588	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Omodysplasia	19481194	CNVD
Breast cancer	22032731	CNVD
Mantle cell lymphoma	19690137	CNVD
Rhabdomyosarcoma	17210683	CNVD
Breast cancer	21364760	CNVD
Medulloblastoma	19270706	CNVD
Burkitt''s lymphoma	19759907	CNVD
Wilms tumour	21544195	CNVD
Acute myeloid leukemia	19651601	CNVD
Effusion lymphoma	18079361	CNVD
Developmental delay	21147756	CNVD
Cancer	20164920	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Myelofibrosis	22110671	CNVD
Hirschsprung''s Disease	21712996	CNVD
Cancer	21183584	CNVD
Breast cancer	17603634	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Thyroid cancer	19087340	CNVD
abortions and stillbirths	19751515	CNVD

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:93866600-93869000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr13:93867000-93868000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
3	chr13:93867000-93868200	Weak transcription	H9 Cell Line	embryonic stem cell
4	chr13:93867000-93868200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
5	chr13:93867000-93868200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr13:93867200-93868200	Enhancers	HUES48 Cell Line	embryonic stem cell
7	chr13:93867200-93868400	Enhancers	HUES6 Cell Line	embryonic stem cell
8	chr13:93867400-93867800	Weak transcription	HUES64 Cell Line	embryonic stem cell
9	chr13:93867600-93868200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
10	chr13:93867800-93868600	Enhancers	HUES64 Cell Line	embryonic stem cell
11	chr13:93867800-93869400	Enhancers	H1 Cell Line	embryonic stem cell

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