Variant report

Variant	esv3372028
Chromosome Location	chr10:42432546-42436744
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 136 )
Associated
traits (count: 58 )

Variant overlapped rSNPs/rCNVs (count:136 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs564739042	chr10:42432546-42432547	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
2	rs527343093	chr10:42432548-42432549	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
3	rs566851292	chr10:42432558-42432559	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
4	rs557017444	chr10:42432559-42432560	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
5	rs149145527	chr10:42432567-42432568	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
6	rs201156368	chr10:42432568-42432569	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
7	rs529679837	chr10:42432590-42432591	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
8	rs549528883	chr10:42432606-42432607	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
9	rs12257090	chr10:42432614-42432615	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
10	rs531915841	chr10:42432615-42432616	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
11	rs147914141	chr10:42432617-42432618	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
12	rs551964385	chr10:42432644-42432645	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
13	rs549431890	chr10:42432646-42432647	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
14	rs116148524	chr10:42432655-42432656	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
15	rs368968425	chr10:42432670-42432671	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
16	rs372234520	chr10:42432687-42432688	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
17	rs141656522	chr10:42432695-42432696	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
18	rs12261709	chr10:42432697-42432698	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
19	rs115710438	chr10:42432721-42432722	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
20	rs80224258	chr10:42432726-42432727	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
21	rs556303234	chr10:42432737-42432738	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
22	rs201932236	chr10:42432739-42432740	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
23	rs576237010	chr10:42432741-42432742	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
24	rs76776314	chr10:42432743-42432744	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
25	rs111990431	chr10:42432744-42432745	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
26	rs201662713	chr10:42432761-42432762	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
27	rs9732989	chr10:42432762-42432763	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
28	rs113173172	chr10:42432777-42432778	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
29	rs111364842	chr10:42432785-42432786	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
30	rs112159077	chr10:42432800-42432801	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
31	rs540864694	chr10:42432802-42432803	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
32	rs556126853	chr10:42432807-42432808	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
33	rs374656253	chr10:42432829-42432830	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
34	rs200582208	chr10:42432835-42432836	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
35	rs142001712	chr10:42432840-42432841	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
36	rs367760180	chr10:42432841-42432842	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
37	rs368209582	chr10:42432851-42432852	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
38	rs189259112	chr10:42432855-42432856	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
39	rs533552015	chr10:42432879-42432880	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
40	rs372814645	chr10:42432880-42432881	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
41	rs369572808	chr10:42432882-42432883	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
42	rs563147597	chr10:42432885-42432886	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
43	rs553527126	chr10:42432892-42432893	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
44	rs552100964	chr10:42432905-42432906	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
45	rs116957283	chr10:42432950-42432951	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
46	rs530038494	chr10:42432963-42432964	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
47	rs549702440	chr10:42432964-42432965	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
48	rs548024583	chr10:42432970-42432971	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
49	rs578037646	chr10:42432972-42432973	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
50	rs567719845	chr10:42432975-42432976	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:58)

Disease	PMID	Source
Pancreatic endocrine tumor	17639061	CNVD
Gastric cancer	17908304	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	21979893	CNVD
Melanoma	18172304	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Lung cancer	18438408	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Ewing''s sarcoma	17952124	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	20724749	CNVD
Autism	22495311	CNVD
Esophageal cancer	21851588	CNVD
Prostate cancer	18632612	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	21509527	CNVD
Autism	18414403	CNVD
Cockayne syndrome	18421352	CNVD
Glioblastoma	16823260	CNVD
Medulloblastoma	16968546	CNVD
Neuroblastoma	17533364	CNVD
Mental retardation	21062444	CNVD
Cancer	21183584	CNVD
T-cell lymphomas	19863542	CNVD
Testicular germ cell tumor	18059402	CNVD
Squamous cell cancer	21044232	CNVD
Glioma	21971842	CNVD
Cancer	21637783	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Colorectal cancer	20709793	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	20858243	CNVD
Obesity	20622171	CNVD
Breast cancer	21364760	CNVD
Myelofibrosis	22110671	CNVD
Schizophrenia	22241247	CNVD
Intellectual disability	21811512	CNVD
Papillary thyroid carcinoma	21436994	CNVD
Hirschsprung''s Disease	21712996	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Obesity	21956041	CNVD
Lung cancer	21569311	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Renal cell carcinoma	18765545	CNVD
Breast cancer	21785460	CNVD
Ovarian cancer	21781307	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:42422800-42433800	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell

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