Variant report

Variant	esv3372183
Chromosome Location	chr3:120924762-120929260
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 199 )
Associated
traits (count: 55 )

Variant overlapped rSNPs/rCNVs (count:199 , 50 per page) page: 1 2 3 4

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs201466453	chr3:120924764-120924765	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs200925621	chr3:120924775-120924776	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs368841056	chr3:120924877-120924878	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs75762075	chr3:120924892-120924893	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs539682959	chr3:120924987-120924988	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs553187748	chr3:120924998-120924999	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs530262635	chr3:120925006-120925007	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs191251555	chr3:120925021-120925022	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs550312892	chr3:120925045-120925046	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs556941465	chr3:120925137-120925138	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs182319609	chr3:120925180-120925181	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs534973566	chr3:120925207-120925208	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs542409007	chr3:120925236-120925237	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs147985527	chr3:120925252-120925253	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs568879806	chr3:120925257-120925258	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs537899036	chr3:120925272-120925273	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs573039934	chr3:120925281-120925282	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs141612677	chr3:120925283-120925284	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs187651443	chr3:120925374-120925375	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs530799408	chr3:120925383-120925384	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs550969957	chr3:120925395-120925396	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs193273321	chr3:120925420-120925421	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs571009295	chr3:120925438-120925439	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs376336241	chr3:120925439-120925440	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs561396872	chr3:120925442-120925443	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs185023692	chr3:120925502-120925503	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs546838807	chr3:120925507-120925508	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs560728966	chr3:120925510-120925511	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs566599297	chr3:120925543-120925544	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs535564427	chr3:120925552-120925553	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs111477284	chr3:120925561-120925562	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs528243159	chr3:120925567-120925568	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs190266298	chr3:120925574-120925575	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs571278341	chr3:120925580-120925581	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs537016286	chr3:120925639-120925640	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs372725456	chr3:120925647-120925648	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs567405206	chr3:120925648-120925649	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs201696788	chr3:120925656-120925657	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs555168548	chr3:120925753-120925754	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs552937525	chr3:120925754-120925755	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs533540230	chr3:120925801-120925802	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs192533820	chr3:120925837-120925838	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs538783260	chr3:120925918-120925919	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs150699463	chr3:120925950-120925951	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs184156883	chr3:120925965-120925966	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs575040751	chr3:120925968-120925969	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs575259878	chr3:120925972-120925973	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs575206132	chr3:120925973-120925974	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs188830647	chr3:120925978-120925979	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs561635621	chr3:120925995-120925996	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:55)

Disease	PMID	Source
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
Cancer	21183584	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Bipolar disorder	20877625	CNVD
Bipolar disorder	21956041	CNVD
Bipolar disorder	22241247	CNVD
Biliary cancer	18923514	CNVD
Prostate cancer	21965145	CNVD
Cancer	21129771	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Cervical cancer	21062161	CNVD
Squamous cell cancer	20885788	CNVD
Melanoma	18172304	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Bipolar disorder	18458673	CNVD
Breast cancer	22032731	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Breast cancer	16461572	CNVD
Neuroblastoma	17533364	CNVD
microdeletion syndrome	22180640	CNVD
Cervical Cancer	21857958	CNVD
Melanoma	21693616	CNVD
Lung cancer	21426551	CNVD
Cancer	21637783	CNVD
Cervical cancer	21063398	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Liposarcoma	21253554	CNVD
Oral cancer	21386901	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	22065749	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	16608533	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Developmental delay	22180640	CNVD
Multiple myeloma	17550852	CNVD
Basal cell lymphoma	21115979	CNVD
Ovarian cancer	22174824	CNVD
lymphocytic leukemia	21291569	CNVD
small cell lung cancer	20016488	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Autism	22241247	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:120914800-120935400	Weak transcription	Ovary	ovary

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links