Variant report
Variant | esv3372246 |
---|---|
Chromosome Location | chr11:71223101-71435819 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:2855)
- CpG islands (count:6297)
- Chromatin interactive region (count:36)
- LncRNA region (count:17)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr11:71291147-71291237 | K562 | blood: | n/a | n/a |
2 | ARID3A | chr11:71410234-71410262 | K562 | blood: | n/a | n/a |
3 | ARID3A | chr11:71417122-71417426 | K562 | blood: | n/a | n/a |
4 | ARID3A | chr11:71423994-71424313 | K562 | blood: | n/a | n/a |
5 | ARID3A | chr11:71416385-71416810 | K562 | blood: | n/a | n/a |
6 | ARID3A | chr11:71423449-71423649 | K562 | blood: | n/a | n/a |
7 | ARID3A | chr11:71237205-71237575 | HepG2 | liver: | n/a | n/a |
8 | ARID3A | chr11:71246189-71246536 | HepG2 | liver: | n/a | n/a |
9 | ATF1 | chr11:71430611-71430715 | K562 | blood: | n/a | n/a |
10 | ATF1 | chr11:71417251-71417305 | K562 | blood: | n/a | n/a |
11 | ATF1 | chr11:71274374-71274763 | K562 | blood: | n/a | n/a |
12 | ATF1 | chr11:71328834-71328851 | K562 | blood: | n/a | n/a |
13 | ATF2 | chr11:71262610-71263131 | GM12878 | blood: | n/a | n/a |
14 | ATF2 | chr11:71251016-71252199 | GM12878 | blood: | n/a | n/a |
15 | ATF2 | chr11:71254252-71254755 | GM12878 | blood: | n/a | n/a |
16 | ATF2 | chr11:71251483-71252131 | GM12878 | blood: | n/a | n/a |
17 | ATF2 | chr11:71251026-71251407 | GM12878 | blood: | n/a | n/a |
18 | ATF2 | chr11:71254369-71254678 | GM12878 | blood: | n/a | n/a |
19 | ATF2 | chr11:71241553-71242059 | GM12878 | blood: | n/a | n/a |
20 | ATF3 | chr11:71390992-71391254 | K562 | blood: | n/a | n/a |
21 | ATF3 | chr11:71300244-71300497 | K562 | blood: | n/a | n/a |
22 | ATF3 | chr11:71416472-71416725 | K562 | blood: | n/a | n/a |
23 | BACH1 | chr11:71291175-71291514 | H1-hESC | embryonic stem cell: | n/a | n/a |
24 | BACH1 | chr11:71262748-71263014 | K562 | blood: | n/a | n/a |
25 | BACH1 | chr11:71262761-71263011 | H1-hESC | embryonic stem cell: | n/a | n/a |
26 | BACH1 | chr11:71421452-71421711 | H1-hESC | embryonic stem cell: | n/a | n/a |
27 | BATF | chr11:71364018-71364247 | GM12878 | blood: | n/a | chr11:71364110-71364121 |
28 | BATF | chr11:71262648-71263064 | GM12878 | blood: | n/a | chr11:71262880-71262891 |
29 | BATF | chr11:71426864-71427152 | GM12878 | blood: | n/a | n/a |
30 | BATF | chr11:71407057-71407555 | GM12878 | blood: | n/a | n/a |
31 | BATF | chr11:71421930-71422331 | GM12878 | blood: | n/a | n/a |
32 | BATF | chr11:71300267-71300512 | GM12878 | blood: | n/a | n/a |
33 | BATF | chr11:71325819-71326075 | GM12878 | blood: | n/a | n/a |
34 | BATF | chr11:71315927-71316371 | GM12878 | blood: | n/a | n/a |
35 | BATF | chr11:71376144-71376697 | GM12878 | blood: | n/a | n/a |
36 | BATF | chr11:71398779-71399009 | GM12878 | blood: | n/a | n/a |
37 | BATF | chr11:71428726-71429101 | GM12878 | blood: | n/a | chr11:71428919-71428927 |
38 | BATF | chr11:71364307-71364538 | GM12878 | blood: | n/a | n/a |
39 | BATF | chr11:71254310-71254769 | GM12878 | blood: | n/a | n/a |
40 | BATF | chr11:71426836-71427105 | GM12878 | blood: | n/a | n/a |
41 | BATF | chr11:71425014-71425933 | GM12878 | blood: | n/a | n/a |
42 | BATF | chr11:71254317-71254656 | GM12878 | blood: | n/a | n/a |
43 | BATF | chr11:71250991-71251419 | GM12878 | blood: | n/a | n/a |
44 | BATF | chr11:71376106-71376750 | GM12878 | blood: | n/a | n/a |
45 | BATF | chr11:71325884-71326044 | GM12878 | blood: | n/a | n/a |
46 | BATF | chr11:71428825-71429020 | GM12878 | blood: | n/a | chr11:71428919-71428927 |
47 | BATF | chr11:71262740-71263045 | GM12878 | blood: | n/a | chr11:71262880-71262891 |
48 | BATF | chr11:71425385-71425877 | GM12878 | blood: | n/a | n/a |
49 | BATF | chr11:71398772-71399069 | GM12878 | blood: | n/a | n/a |
50 | BATF | chr11:71251039-71251366 | GM12878 | blood: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr11:71276557-71276607 | AG04449 | skin: | fetal |
2 | chr11:71276654-71276704 | ECC-1 | luminal epithelium: | n/a |
3 | chr11:71230734-71230784 | HL-60 | blood: | n/a |
4 | chr11:71417713-71417763 | SK-N-SH_RA | brain: | n/a |
5 | chr11:71311984-71312034 | BJ | skin: | n/a |
6 | chr11:71230174-71230224 | HPAEpiC | pulmonary alveolar: | n/a |
7 | chr11:71327353-71327403 | HNPCEpiC | eye: | n/a |
8 | chr11:71248741-71248791 | NHDF-neo | bronchial: | n/a |
9 | chr11:71294605-71294655 | Hepatocyte | liver: | n/a |
10 | chr11:71294605-71294655 | NT2-D1 | testis: | n/a |
11 | chr11:71350346-71350396 | BJ | skin: | n/a |
12 | chr11:71350888-71350938 | GM06990 | blood: | n/a |
13 | chr11:71293996-71294046 | GM12891 | blood: | n/a |
14 | chr11:71276654-71276704 | HUVEC | blood vessel: | n/a |
15 | chr11:71276557-71276607 | AG04449 | skin: | fetal |
16 | chr11:71276654-71276704 | ECC-1 | luminal epithelium: | n/a |
17 | chr11:71230734-71230784 | HL-60 | blood: | n/a |
18 | chr11:71417713-71417763 | SK-N-SH_RA | brain: | n/a |
19 | chr11:71311984-71312034 | BJ | skin: | n/a |
20 | chr11:71230174-71230224 | HPAEpiC | pulmonary alveolar: | n/a |
21 | chr11:71327353-71327403 | HNPCEpiC | eye: | n/a |
22 | chr11:71248741-71248791 | NHDF-neo | bronchial: | n/a |
23 | chr11:71294605-71294655 | Hepatocyte | liver: | n/a |
24 | chr11:71294605-71294655 | NT2-D1 | testis: | n/a |
25 | chr11:71350346-71350396 | BJ | skin: | n/a |
26 | chr11:71350888-71350938 | GM06990 | blood: | n/a |
27 | chr11:71293996-71294046 | GM12891 | blood: | n/a |
28 | chr11:71276654-71276704 | HUVEC | blood vessel: | n/a |
29 | chr11:71418204-71418254 | Hepatocyte | liver: | n/a |
30 | chr11:71285546-71285596 | HRE | kidney: | n/a |
31 | chr11:71293892-71293942 | A549 | lung: | n/a |
32 | chr11:71421380-71421430 | NHBE | bronchial: | n/a |
33 | chr11:71238382-71238432 | SK-N-SH | brain: | n/a |
34 | chr11:71248741-71248791 | GM12891 | blood: | n/a |
35 | chr11:71320735-71320785 | NB4 | blood: | n/a |
36 | chr11:71259292-71259342 | A549 | lung: | n/a |
37 | chr11:71247746-71247796 | HRCEpiC | kidney: | n/a |
38 | chr11:71340352-71340402 | PFSK-1 | brain: | n/a |
39 | chr11:71250073-71250123 | BJ | skin: | n/a |
40 | chr11:71238205-71238255 | H1-hESC | embryonic stem cell: | embryo |
41 | chr11:71295908-71295958 | NB4 | blood: | n/a |
42 | chr11:71287919-71287969 | NHBE | bronchial: | n/a |
43 | chr11:71322699-71322749 | HEK293 | kidney: | embryo |
44 | chr11:71321132-71321182 | GM12892 | blood: | n/a |
45 | chr11:71340182-71340232 | HL-60 | blood: | n/a |
46 | chr11:71320513-71320563 | HEEpiC | esophagus: | n/a |
47 | chr11:71237522-71237572 | ovcar-3 | ovarian: | n/a |
48 | chr11:71352122-71352172 | Jurkat | blood: | n/a |
49 | chr11:71294744-71294794 | AG09319 | gingival: | n/a |
50 | chr11:71295678-71295728 | SK-N-MC | brain: | n/a |
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No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr11:71272055..71274887-chr11:71280546..71282110,2 | K562 | blood: | |
2 | chr11:71278406..71279386-chr11:71291430..71292089,2 | MCF-7 | breast: | |
3 | chr11:71282448..71285837-chr11:71286010..71289392,3 | MCF-7 | breast: | |
4 | chr11:71176264..71179140-chr11:71273245..71275842,2 | MCF-7 | breast: | |
5 | chr11:71253515..71257343-chr11:71260479..71262893,3 | MCF-7 | breast: | |
6 | chr11:71279845..71280406-chr11:71290008..71290749,2 | MCF-7 | breast: | |
7 | chr11:71185954..71187783-chr11:71290414..71293087,2 | MCF-7 | breast: | |
8 | chr11:71279425..71280036-chr11:71290519..71291383,2 | MCF-7 | breast: | |
9 | chr11:71158649..71161220-chr11:71291218..71293129,2 | MCF-7 | breast: | |
10 | chr11:71278628..71280477-chr11:71289049..71291000,2 | MCF-7 | breast: | |
11 | chr11:71221136..71223101-chr11:71257935..71260917,2 | MCF-7 | breast: | |
12 | chr11:71198072..71200599-chr11:71283906..71285709,2 | MCF-7 | breast: | |
13 | chr11:71278406..71279386-chr11:71291430..71292089,2 | MCF-7 | breast: | |
14 | chr11:71282448..71285837-chr11:71286010..71289392,3 | MCF-7 | breast: | |
15 | chr11:71254168..71255682-chr11:71257713..71259935,2 | MCF-7 | breast: | |
16 | chr11:71230161..71233081-chr11:71237007..71238796,2 | MCF-7 | breast: | |
17 | chr11:71272055..71274887-chr11:71280546..71282110,2 | K562 | blood: | |
18 | chr11:71163473..71165824-chr11:71289975..71292795,2 | MCF-7 | breast: | |
19 | chr11:71253515..71257343-chr11:71260479..71262893,3 | MCF-7 | breast: | |
20 | chr11:71349980..71350709-chr11:71511135..71512071,2 | K562 | blood: | |
21 | chr11:71257442..71259140-chr11:71259571..71262525,2 | K562 | blood: | |
22 | chr11:71198148..71200436-chr11:71273726..71275977,2 | MCF-7 | breast: | |
23 | chr11:71279845..71280406-chr11:71290008..71290749,2 | MCF-7 | breast: | |
24 | chr11:71189071..71191550-chr11:71272066..71273804,2 | MCF-7 | breast: | |
25 | chr11:71284028..71285602-chr11:71289697..71292475,2 | MCF-7 | breast: | |
26 | chr11:71257442..71259140-chr11:71259571..71262525,2 | K562 | blood: | |
27 | chr11:71156732..71161621-chr11:71272936..71276184,4 | MCF-7 | breast: | |
28 | chr11:71278628..71280477-chr11:71289049..71291000,2 | MCF-7 | breast: | |
29 | chr11:71209230..71212129-chr11:71251545..71253303,2 | MCF-7 | breast: | |
30 | chr11:71162651..71164294-chr11:71282060..71284159,2 | K562 | blood: | |
31 | chr11:71158604..71160379-chr11:71280505..71283180,2 | MCF-7 | breast: | |
32 | chr11:71290639..71292875-chr11:71296370..71298788,2 | MCF-7 | breast: | |
33 | chr11:71192889..71195578-chr11:71229380..71232124,2 | MCF-7 | breast: | |
34 | chr11:71159116..71165503-chr11:71274687..71279227,9 | MCF-7 | breast: | |
35 | chr11:71278394..71279845-chr11:71290961..71292008,7 | MCF-7 | breast: | |
36 | chr11:71279425..71280036-chr11:71290519..71291383,2 | MCF-7 | breast: |
(count:17 , 50 per page) page:
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No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-AP000867.1-2 | chr11:71383721-71384047 | ENSG00000254504.1 |
2 | lnc-FAM86C1-4 | chr11:71393417-71393825 | expRegAs_chr11_7370_+ |
3 | lnc-AP000867.1-2 | chr11:71421533-71421627 | ENSG00000254504.1 |
4 | lnc-AP000867.1-3 | chr11:71292956-71293203 | NONHSAT022693 |
5 | lnc-KRTAP5-10-1 | chr11:71279726-71279980 | NONHSAT022692 |
6 | lnc-FAM86C1-1 | chr11:71433219-71433273 | NONHSAT022701 |
7 | lnc-FAM86C1-5 | chr11:71392883-71393202 | expRegAs_chr11_7367_+ |
8 | lnc-AP000867.1-3 | chr11:71310043-71310371 | NONHSAT022693 |
9 | lnc-AP000867.1-1 | chr11:71415223-71415306 | ENSG00000254972 |
10 | lnc-FAM86C1-1 | chr11:71422786-71422863 | NONHSAT022701 |
11 | lnc-FAM86C1-1 | chr11:71425421-71425604 | NONHSAT022701 |
12 | lnc-AP000867.1-1 | chr11:71416406-71416450 | ENSG00000254972 |
13 | lnc-AP000867.1-4 | chr11:71401499-71401703 | NONHSAT022697 |
14 | lnc-FAM86C1-3 | chr11:71394183-71394998 | expRegAs_chr11_7373_+ |
15 | lnc-FAM86C1-2 | chr11:71395710-71396117 | expRegAs_chr11_7374_+ |
16 | lnc-AP000867.1-1 | chr11:71412314-71412531 | ENSG00000254972 |
17 | lnc-AP000867.1-3 | chr11:71314349-71314399 | NONHSAT022693 |
No data |
No data |
Variant related genes | Relation type |
---|---|
OR7E87P | TF binding region |
KRTAP5-10 | TF binding region |
OR7E4P | TF binding region |
KRTAP5-9 | TF binding region |
ENSG00000254805 | TF binding region |
ENSG00000248903 | TF binding region |
ENPP7P8 | TF binding region |
ENSG00000221458 | TF binding region |
ENSG00000255415 | TF binding region |
KRTAP5-7 | TF binding region |
ENSG00000223235 | TF binding region |
ENSG00000254972 | TF binding region |
KRTAP5-14P | TF binding region |
ENSG00000187811 | TF binding region |
KRTAP5-11 | TF binding region |
KRTAP5-8 | TF binding region |
UNC93B6 | TF binding region |
RPS3AP41 | TF binding region |
OR7E87P | CpG island |
KRTAP5-10 | CpG island |
OR7E4P | CpG island |
KRTAP5-9 | CpG island |
ENSG00000254805 | CpG island |
ENSG00000248903 | CpG island |
ENPP7P8 | CpG island |
ENSG00000221458 | CpG island |
ENSG00000255415 | CpG island |
KRTAP5-7 | CpG island |
ENSG00000223235 | CpG island |
ENSG00000254972 | CpG island |
KRTAP5-14P | CpG island |
ENSG00000187811 | CpG island |
KRTAP5-11 | CpG island |
KRTAP5-8 | CpG island |
UNC93B6 | CpG island |
RPS3AP41 | CpG island |
ENSG00000172890 | chromatin interactions |
ENSG00000244411 | chromatin interactions |
ENSG00000249387 | chromatin interactions |
ENSG00000248903 | chromatin interactions |
ENSG00000254682 | chromatin interactions |
ENSG00000254997 | chromatin interactions |
ENSG00000172893 | chromatin interactions |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs148695352 | chr11:71223114-71223115 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
2 | rs551579535 | chr11:71223144-71223145 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
3 | rs570070672 | chr11:71223148-71223149 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
4 | rs144360510 | chr11:71223160-71223161 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
5 | rs549350363 | chr11:71223161-71223162 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
6 | rs559100619 | chr11:71223178-71223179 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
7 | rs193143649 | chr11:71223234-71223235 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
8 | rs535300559 | chr11:71223252-71223253 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
9 | rs79326857 | chr11:71223256-71223257 | Weak transcription | n/a | n/a | Overlapped CNVs | mRNA abundance |
10 | rs571726348 | chr11:71223294-71223295 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
11 | rs199707220 | chr11:71223302-71223303 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
12 | rs538775179 | chr11:71223372-71223373 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
13 | rs556771949 | chr11:71223377-71223378 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
14 | rs146615255 | chr11:71223413-71223414 | Weak transcription | n/a | n/a | Overlapped CNVs | mRNA abundance |
15 | rs542220085 | chr11:71223418-71223419 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
16 | rs376187734 | chr11:71223445-71223446 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
17 | rs189001837 | chr11:71223511-71223512 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
18 | rs553366385 | chr11:71223529-71223530 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
19 | rs571677801 | chr11:71223530-71223531 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
20 | rs572820036 | chr11:71223566-71223567 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
21 | rs371394178 | chr11:71223588-71223589 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
22 | rs540132837 | chr11:71223599-71223600 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
23 | rs376192749 | chr11:71223613-71223614 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
24 | rs565131646 | chr11:71223614-71223615 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
25 | rs532196762 | chr11:71223625-71223626 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
26 | rs377747886 | chr11:71223656-71223657 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
27 | rs370921499 | chr11:71223695-71223696 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
28 | rs375825991 | chr11:71223707-71223708 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
29 | rs544351955 | chr11:71223721-71223722 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
30 | rs142532522 | chr11:71223738-71223739 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
31 | rs530997331 | chr11:71223796-71223797 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
32 | rs184041885 | chr11:71223816-71223817 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
33 | rs567648063 | chr11:71223868-71223869 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
34 | rs528822760 | chr11:71223874-71223875 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
35 | rs188785494 | chr11:71223907-71223908 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
36 | rs148838851 | chr11:71224042-71224043 | Weak transcription | n/a | n/a | Overlapped CNVs | mRNA abundance |
37 | rs576283627 | chr11:71224093-71224094 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
38 | rs538869508 | chr11:71224132-71224133 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
39 | rs139546838 | chr11:71224145-71224146 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
40 | rs568636604 | chr11:71224166-71224167 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
41 | rs186935803 | chr11:71224170-71224171 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
42 | rs145178616 | chr11:71224173-71224174 | Weak transcription | n/a | n/a | Overlapped CNVs | mRNA abundance |
43 | rs372140171 | chr11:71224243-71224244 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
44 | rs572498925 | chr11:71224269-71224270 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
45 | rs540559367 | chr11:71224328-71224329 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
46 | rs558582377 | chr11:71224371-71224372 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
47 | rs376719554 | chr11:71224404-71224405 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
48 | rs147961448 | chr11:71224407-71224408 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
49 | rs577020459 | chr11:71224410-71224411 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
50 | rs544097216 | chr11:71224453-71224454 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Medulloblastoma | 21979893 | CNVD |
Gastric cancer | 17908304 | CNVD |
Multiple myeloma | 20724749 | CNVD |
Wilms tumour | 21544195 | CNVD |
Autism | 22495311 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Non-small cell lung cancer | 21385341 | CNVD |
Intellectual disability | 22102821 | CNVD |
Glioblastoma multiforme | 21138945 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
Acute lymphoblastic leukemia | 20067559 | CNVD |
Cancer | 21637783 | CNVD |
Acute myeloid leukemia | 16864856 | CNVD |
Chronic lymphocytic leukemia | 21795749 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Neuroblastoma | 21484798 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Oral cancer | 21386901 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Breast cancer | 20837533 | CNVD |
Breast cancer | 21264507 | CNVD |
Cervical cancer | 21063398 | CNVD |
Glioblastoma multiforme | 19960244 | CNVD |
Liposarcoma | 21253554 | CNVD |
Neuroblastoma | 18923524 | CNVD |
Neuroblastoma | 18664255 | CNVD |
Monoclonal gammopathy of undetermined significance | 17077331 | CNVD |
Multiple myeloma | 17077331 | CNVD |
Neuroblastoma | 17533364 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Lung cancer | 18438408 | CNVD |
Basal cell lymphoma | 16317097 | CNVD |
Diffuse large b-cell lymphoma | 16317097 | CNVD |
Prostate cancer | 18632612 | CNVD |
Smith-Lemli-Opitz syndrome | 21572526 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Multiple myeloma | 16461302 | CNVD |
Cancer | 16751803 | CNVD |
Seminomas | 18059402 | CNVD |
Acute lymphoblastic leukemia | 21339820 | CNVD |
Chordoma | 21602918 | CNVD |
Metanephric adenoma | 20802469 | CNVD |
Melanoma | 18172304 | CNVD |
Breast cancer | 21806811 | CNVD |
Breast cancer | 22002566 | CNVD |
Ductal carcinoma | 18381933 | CNVD |
Retinoblastoma | 22278416 | CNVD |
Breast cancer | 20953835 | CNVD |
oto-dental syndrome | 17656375 | CNVD |
Asthma | 21956041 | CNVD |
Breast cancer | 17603634 | CNVD |
Ovarian neoplasms | 16753589 | CNVD |
Non-small cell lung cancer | 20864512 | CNVD |
Hepatocellular carcinoma | 16750200 | CNVD |
Cervical cancer | 21062161 | CNVD |
Breast cancer | 21509527 | CNVD |
Breast cancer | 17001317 | CNVD |
Oral squamous cell carcinoma | 16619035 | CNVD |
Intracranial aneurysm | 16715129 | CNVD |
Colorectal cancer | 16272173 | CNVD |
Primary mediastinal b-cell lymphoma | 17728785 | CNVD |
Esophageal adenocarcinoma | 18820669 | CNVD |
Colorectal cancer | 16882699 | CNVD |
Berardinelli-seip congenital generalized lipodystrophy | 17668395 | CNVD |
Spinal muscular atrophy | 17668395 | CNVD |
Neonatal seizures | 17668395 | CNVD |
Neonatal seizures | 17668391 | CNVD |
Neuroticism | 17667963 | CNVD |
Cancer | 17916600 | CNVD |
Squamous cell cancer | 19047905 | CNVD |
Multiple endocrine neoplasia type 1 | 19566914 | CNVD |
XY sex reversal | 17503084 | CNVD |
Berardinelli-seip congenital generalized lipodystrophy | 17668391 | CNVD |
Maculopathy | 17646752 | CNVD |
Breast cancer | 17899364 | CNVD |
Breast cancer | 17157792 | CNVD |
Esophageal squamous carcinoma | 18350619 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Cancer | 20164919 | CNVD |
Hodgkin''s lymphoma | 18641027 | CNVD |
Breast cancer | 21364760 | CNVD |
lymphocytic leukemia | 21291569 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Ovarian clear cell carcinoma | 19293255 | CNVD |
Cancer | 22183965 | CNVD |
Melanoma | 22183965 | CNVD |
Esophageal squamous carcinoma | 18405350 | CNVD |
Breast cancer | 16620391 | CNVD |
Multiple myeloma | 17550852 | CNVD |
Breast cancer | 21785460 | CNVD |
Neuroblastoma | 18923191 | CNVD |
low-grade B-cell lymphoma tumor | 18367492 | CNVD |
Chronic lymphocytic leukemia | 22228453 | CNVD |
Multiple myeloma | 16616336 | CNVD |
Urothelial cell carcinoma | 18451213 | CNVD |
Leukoplakia | 24403051 | CNVD |
Prostate cancer | 17217626 | CNVD |
Cancer | 22429812 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Non-syndromic sensorineural hearing loss | 17122850 | CNVD |
Non-syndromic sensorineural hearing loss | 19812545 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
Breast cancer | 22522925 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
Non-syndromic sensorineural hearing loss | 18451855 | CNVD |
Pancreatic ductal adenocarcinoma | 19077451 | CNVD |
Breast cancer | 17142309 | CNVD |
Ovarian cancer | 21781307 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr11:71211800-71232400 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
2 | chr11:71213200-71232200 | Weak transcription | Brain Angular Gyrus | brain |
3 | chr11:71215600-71236600 | Weak transcription | Brain Anterior Caudate | brain |
4 | chr11:71216400-71235400 | Weak transcription | Brain Substantia Nigra | brain |
5 | chr11:71222000-71230400 | Weak transcription | HSMMtube | muscle |
6 | chr11:71228000-71232200 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
7 | chr11:71229400-71229600 | Enhancers | Brain Inferior Temporal Lobe | brain |
8 | chr11:71229600-71232200 | Weak transcription | Brain Inferior Temporal Lobe | brain |
9 | chr11:71230000-71230800 | Enhancers | Placenta | Placenta |
10 | chr11:71230000-71232200 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
11 | chr11:71230200-71231600 | Enhancers | Fetal Muscle Leg | muscle |
12 | chr11:71230400-71231400 | Enhancers | Fetal Muscle Trunk | muscle |
13 | chr11:71230400-71231400 | Enhancers | HSMM | muscle |
14 | chr11:71230400-71231400 | Enhancers | HSMMtube | muscle |
15 | chr11:71230400-71232200 | Weak transcription | Brain Cingulate Gyrus | brain |
16 | chr11:71230400-71235800 | Weak transcription | Brain Hippocampus Middle | brain |
17 | chr11:71230800-71233600 | Weak transcription | Adipose Nuclei | Adipose |
18 | chr11:71232200-71232800 | Strong transcription | Brain Angular Gyrus | brain |
19 | chr11:71232200-71232800 | Strong transcription | Brain Cingulate Gyrus | brain |
20 | chr11:71232200-71232800 | Strong transcription | Brain Inferior Temporal Lobe | brain |
21 | chr11:71232200-71232800 | Strong transcription | Brain Dorsolateral Prefrontal Cortex | brain |
22 | chr11:71232200-71233000 | Strong transcription | Skeletal Muscle Male | skeletal muscle |
23 | chr11:71232400-71232800 | ZNF genes & repeats | Pancreas | Pancrea |
24 | chr11:71232400-71232800 | ZNF genes & repeats | Skeletal Muscle Female | skeletal muscle |
25 | chr11:71232800-71233200 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
26 | chr11:71232800-71236400 | Weak transcription | Brain Inferior Temporal Lobe | brain |
27 | chr11:71232800-71236600 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
28 | chr11:71232800-71243600 | Weak transcription | Brain Angular Gyrus | brain |
29 | chr11:71232800-71245800 | Weak transcription | Pancreas | Pancrea |
30 | chr11:71232800-71259800 | Weak transcription | Brain Cingulate Gyrus | brain |
31 | chr11:71233000-71235600 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
32 | chr11:71235800-71238000 | Enhancers | HepG2 | liver |
33 | chr11:71236200-71239200 | Enhancers | Liver | Liver |
34 | chr11:71236400-71237800 | Enhancers | A549 | lung |
35 | chr11:71236600-71236800 | ZNF genes & repeats | Brain Dorsolateral Prefrontal Cortex | brain |
36 | chr11:71236600-71237400 | Enhancers | Stomach Mucosa | stomach |
37 | chr11:71236800-71237000 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
38 | chr11:71237200-71238800 | Enhancers | Fetal Intestine Large | intestine |
39 | chr11:71237400-71238200 | Enhancers | Fetal Intestine Small | intestine |
40 | chr11:71238000-71238200 | Flanking Active TSS | HepG2 | liver |
41 | chr11:71238200-71238600 | Active TSS | HepG2 | liver |
42 | chr11:71238600-71239000 | Enhancers | Primary hematopoietic stem cells short term culture | blood |
43 | chr11:71238600-71239000 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
44 | chr11:71238600-71239000 | Bivalent Enhancer | Fetal Muscle Trunk | muscle |
45 | chr11:71238600-71239200 | Flanking Active TSS | HepG2 | liver |
46 | chr11:71239000-71241400 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
47 | chr11:71239000-71246400 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
48 | chr11:71239200-71239800 | Enhancers | HepG2 | liver |
49 | chr11:71239800-71241600 | Weak transcription | HepG2 | liver |
50 | chr11:71241400-71242600 | Enhancers | GM12878-XiMat | blood |