No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs538168549 |
chr21:47397356-47397357 |
Weak transcription Active TSS Enhancers Flanking Active TSS Bivalent Enhancer
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs531219126 |
chr21:47397395-47397396 |
Weak transcription Active TSS Enhancers Flanking Active TSS Bivalent Enhancer
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs557691322 |
chr21:47397400-47397401 |
Weak transcription Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs186906097 |
chr21:47397415-47397416 |
Weak transcription Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs191198357 |
chr21:47397468-47397469 |
Weak transcription Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh
|
TF binding regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs7275644 |
chr21:47397525-47397526 |
Weak transcription Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh
|
TF binding regionlncRNA
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
7 |
rs546794334 |
chr21:47397555-47397556 |
Weak transcription Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh
|
TF binding regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs1883048 |
chr21:47397586-47397587 |
Weak transcription Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh
|
TF binding regionlncRNA
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
9 |
rs571878911 |
chr21:47397588-47397589 |
Weak transcription Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh
|
TF binding regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs538390005 |
chr21:47397590-47397591 |
Weak transcription Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh
|
TF binding regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs556526149 |
chr21:47397622-47397623 |
Weak transcription Enhancers Bivalent Enhancer Active TSS
|
TF binding regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs77215405 |
chr21:47397722-47397723 |
Weak transcription Enhancers Bivalent Enhancer Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs78615502 |
chr21:47397724-47397725 |
Weak transcription Enhancers Bivalent Enhancer Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs9980553 |
chr21:47397727-47397728 |
Weak transcription Enhancers Bivalent Enhancer Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs76573695 |
chr21:47397729-47397730 |
Weak transcription Enhancers Bivalent Enhancer Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs9979446 |
chr21:47397735-47397736 |
Weak transcription Enhancers Bivalent Enhancer Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs151233285 |
chr21:47397773-47397774 |
Weak transcription Enhancers Bivalent Enhancer Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs568790032 |
chr21:47397805-47397806 |
Weak transcription Enhancers Bivalent Enhancer Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs117775279 |
chr21:47397828-47397829 |
Weak transcription Enhancers Bivalent Enhancer Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
mRNA abundance
|
20 |
rs117179421 |
chr21:47397867-47397868 |
Weak transcription Enhancers Bivalent Enhancer Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs200825536 |
chr21:47398001-47398002 |
Weak transcription Enhancers ZNF genes & repeats Bivalent Enhancer Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs373986375 |
chr21:47398058-47398059 |
Weak transcription Enhancers ZNF genes & repeats Bivalent Enhancer Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs567961613 |
chr21:47398096-47398097 |
Weak transcription Enhancers ZNF genes & repeats Bivalent Enhancer Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs573099935 |
chr21:47398111-47398112 |
Weak transcription Enhancers ZNF genes & repeats Bivalent Enhancer Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs533825716 |
chr21:47398117-47398118 |
Weak transcription Enhancers ZNF genes & repeats Bivalent Enhancer Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs11910769 |
chr21:47398149-47398150 |
Weak transcription Enhancers ZNF genes & repeats Bivalent Enhancer Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs11910668 |
chr21:47398152-47398153 |
Weak transcription Enhancers ZNF genes & repeats Bivalent Enhancer Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs11910685 |
chr21:47398162-47398163 |
Weak transcription Enhancers ZNF genes & repeats Bivalent Enhancer Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs114041923 |
chr21:47398192-47398193 |
Weak transcription Enhancers ZNF genes & repeats Bivalent Enhancer Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs114606768 |
chr21:47398193-47398194 |
Weak transcription Enhancers ZNF genes & repeats Bivalent Enhancer Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs540380110 |
chr21:47398232-47398233 |
Weak transcription Enhancers ZNF genes & repeats Genic enhancers Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs189709475 |
chr21:47398288-47398289 |
Weak transcription Enhancers ZNF genes & repeats Genic enhancers Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs555903812 |
chr21:47398314-47398315 |
Weak transcription Enhancers ZNF genes & repeats Genic enhancers Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs377064560 |
chr21:47398378-47398379 |
Weak transcription Enhancers ZNF genes & repeats Genic enhancers Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs578136906 |
chr21:47398390-47398391 |
Weak transcription Enhancers ZNF genes & repeats Genic enhancers Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs139685046 |
chr21:47398391-47398392 |
Weak transcription Enhancers ZNF genes & repeats Genic enhancers Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs113410831 |
chr21:47398392-47398393 |
Weak transcription Enhancers ZNF genes & repeats Genic enhancers Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs386819384 |
chr21:47398410-47398411 |
Enhancers Weak transcription Genic enhancers Flanking Active TSS Bivalent Enhancer
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs9983378 |
chr21:47398411-47398412 |
Enhancers Weak transcription Genic enhancers Flanking Active TSS Bivalent Enhancer
|
TF binding region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
40 |
rs112613881 |
chr21:47398414-47398415 |
Enhancers Weak transcription Genic enhancers Flanking Active TSS Bivalent Enhancer
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs562060468 |
chr21:47398500-47398501 |
Enhancers Weak transcription Genic enhancers Flanking Active TSS Bivalent Enhancer
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs182747237 |
chr21:47398517-47398518 |
Enhancers Weak transcription Genic enhancers Flanking Active TSS Bivalent Enhancer
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs58714612 |
chr21:47398527-47398528 |
Enhancers Weak transcription Genic enhancers Flanking Active TSS Bivalent Enhancer
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs527673367 |
chr21:47398533-47398534 |
Enhancers Weak transcription Genic enhancers Flanking Active TSS Bivalent Enhancer
|
TF binding regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs539314995 |
chr21:47398564-47398565 |
Enhancers Weak transcription Genic enhancers Flanking Active TSS Bivalent Enhancer
|
TF binding regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs144559465 |
chr21:47398577-47398578 |
Enhancers Weak transcription Genic enhancers Flanking Active TSS Bivalent Enhancer
|
TF binding regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs368232374 |
chr21:47398610-47398611 |
Enhancers Weak transcription Genic enhancers Flanking Active TSS Bivalent Enhancer
|
TF binding regionCpG islandlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs146622046 |
chr21:47398616-47398617 |
Enhancers Weak transcription Genic enhancers Flanking Active TSS Bivalent Enhancer
|
TF binding regionCpG islandlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs568947657 |
chr21:47398617-47398618 |
Enhancers Weak transcription Genic enhancers Flanking Active TSS Bivalent Enhancer
|
TF binding regionCpG islandlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs386819385 |
chr21:47398647-47398648 |
Enhancers Weak transcription Genic enhancers Flanking Active TSS Bivalent Enhancer
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|