Variant report

Variant	esv3374178
Chromosome Location	chr9:71787757-71790305
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:440)
CpG islands
(count:305)
Chromatin interactive
region (count:5)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:440 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:71788981-71788988	K562	blood:	n/a	n/a
2	ATF2	chr9:71789577-71790776	GM12878	blood:	n/a	n/a
3	ATF2	chr9:71789602-71790821	GM12878	blood:	n/a	n/a
4	BACH1	chr9:71789894-71790492	H1-hESC	embryonic stem cell:	n/a	n/a
5	BACH1	chr9:71788674-71789685	H1-hESC	embryonic stem cell:	n/a	n/a
6	BATF	chr9:71789947-71790415	GM12878	blood:	n/a	chr9:71790190-71790201
7	BATF	chr9:71789968-71790373	GM12878	blood:	n/a	chr9:71790190-71790201
8	BCL11A	chr9:71789434-71789789	GM12878	blood:	n/a	chr9:71789750-71789759
9	BCL11A	chr9:71789969-71790373	GM12878	blood:	n/a	chr9:71790245-71790254
10	BCL11A	chr9:71789879-71790439	GM12878	blood:	n/a	chr9:71790245-71790254
11	BCL3	chr9:71789990-71790398	GM12878	blood:	n/a	chr9:71790245-71790254
12	BCL3	chr9:71788847-71789287	GM12878	blood:	n/a	chr9:71789155-71789168
13	BCLAF1	chr9:71789064-71789446	GM12878	blood:	n/a	chr9:71789155-71789168
14	BCLAF1	chr9:71789927-71790716	GM12878	blood:	n/a	chr9:71790245-71790254
15	BCLAF1	chr9:71789493-71790882	GM12878	blood:	n/a	chr9:71790245-71790254 chr9:71789750-71789759
16	BHLHE40	chr9:71789969-71790354	K562	blood:	n/a	n/a
17	BHLHE40	chr9:71788754-71789263	HepG2	liver:	n/a	n/a
18	BHLHE40	chr9:71788609-71789626	K562	blood:	n/a	n/a
19	BHLHE40	chr9:71788581-71791007	GM12878	blood:	n/a	n/a
20	BRCA1	chr9:71790126-71790281	GM12878	blood:	n/a	n/a
21	CCNT2	chr9:71788612-71789670	K562	blood:	n/a	chr9:71789495-71789504
22	CEBPB	chr9:71787881-71788199	HepG2	liver:	n/a	n/a
23	CEBPB	chr9:71787942-71788111	HepG2	liver:	n/a	n/a
24	CEBPB	chr9:71789449-71790527	GM12878	blood:	n/a	n/a
25	CEBPB	chr9:71787924-71788209	Hela-S3	cervix:	n/a	n/a
26	CEBPB	chr9:71787873-71788207	IMR90	lung:	n/a	n/a
27	CEBPB	chr9:71789956-71790701	IMR90	lung:	n/a	n/a
28	CEBPB	chr9:71787896-71788192	K562	blood:	n/a	n/a
29	CEBPD	chr9:71787904-71788120	HepG2	liver:	n/a	n/a
30	CHD1	chr9:71788496-71789115	H1-hESC	embryonic stem cell:	n/a	n/a
31	CHD1	chr9:71788437-71791733	GM12878	blood:	n/a	n/a
32	CHD2	chr9:71788820-71789552	K562	blood:	n/a	n/a
33	CHD2	chr9:71789110-71789435	H1-hESC	embryonic stem cell:	n/a	n/a
34	CHD2	chr9:71788579-71792075	GM12878	blood:	n/a	chr9:71791888-71791898
35	CHD2	chr9:71788854-71789159	Hela-S3	cervix:	n/a	n/a
36	CHD2	chr9:71788704-71788904	HepG2	liver:	n/a	n/a
37	CTBP2	chr9:71788494-71789597	H1-hESC	embryonic stem cell:	n/a	n/a
38	CTCF	chr9:71790180-71790330	HEK293	kidney:	n/a	chr9:71790291-71790300
39	CTCF	chr9:71789140-71789290	GM12874	blood:	n/a	n/a
40	CTCF	chr9:71789080-71789230	GM12874	blood:	n/a	n/a
41	CTCF	chr9:71788720-71788870	AG04449	skin:	n/a	n/a
42	CTCF	chr9:71790163-71790502	GM12878	blood:	n/a	chr9:71790291-71790300
43	CTCF	chr9:71789420-71789570	SAEC	small airway:	n/a	n/a
44	CUX1	chr9:71789641-71790724	GM12878	blood:	n/a	n/a
45	E2F1	chr9:71788662-71789373	Hela-S3	cervix:	n/a	chr9:71788804-71788818 chr9:71789001-71789011 chr9:71788801-71788815
46	E2F4	chr9:71789698-71790401	MCF10A-Er-Src	breast:	n/a	n/a
47	E2F4	chr9:71788940-71789159	GM12878	blood:	n/a	chr9:71789001-71789011
48	E2F4	chr9:71788054-71788438	MCF10A-Er-Src	breast:	n/a	n/a
49	E2F4	chr9:71788656-71789163	MCF10A-Er-Src	breast:	n/a	chr9:71788804-71788818 chr9:71789001-71789011 chr9:71788801-71788815
50	E2F6	chr9:71788808-71789223	K562	blood:	n/a	chr9:71789001-71789011

(count:305 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:71789541-71789591	A549	lung:	n/a
2	chr9:71788748-71788798	BJ	skin:	n/a
3	chr9:71789541-71789591	GM06990	blood:	n/a
4	chr9:71788748-71788798	ECC-1	luminal epithelium:	n/a
5	chr9:71787778-71787828	Jurkat	blood:	n/a
6	chr9:71789653-71789703	HMEC	breast:	n/a
7	chr9:71789653-71789703	Caco-2	colon:	n/a
8	chr9:71787778-71787828	HPAEpiC	pulmonary alveolar:	n/a
9	chr9:71789541-71789591	AG09309	skin:	n/a
10	chr9:71789653-71789703	MCF-7	breast:	n/a
11	chr9:71789541-71789591	RPTEC	kidney:	n/a
12	chr9:71787778-71787828	K562	blood:	n/a
13	chr9:71789653-71789703	HCPEpiC	choroid plexus:	n/a
14	chr9:71789653-71789703	CMK	blood:	n/a
15	chr9:71789541-71789591	HRE	kidney:	n/a
16	chr9:71789541-71789591	BE2_C	brain:	n/a
17	chr9:71788748-71788798	HEEpiC	esophagus:	n/a
18	chr9:71789653-71789703	K562	blood:	n/a
19	chr9:71788748-71788798	SK-N-MC	brain:	n/a
20	chr9:71788759-71788809	HNPCEpiC	eye:	n/a
21	chr9:71788748-71788798	MCF10A-Er-Src	breast:	n/a
22	chr9:71789653-71789703	PrEC	prostate:	n/a
23	chr9:71789653-71789703	SK-N-SH	brain:	n/a
24	chr9:71789653-71789703	SAEC	small airway:	n/a
25	chr9:71789653-71789703	GM12892	blood:	n/a
26	chr9:71789653-71789703	HCF	heart:	n/a
27	chr9:71789541-71789591	SAEC	small airway:	n/a
28	chr9:71788748-71788798	AoSMC	blood vessel:	n/a
29	chr9:71789653-71789703	AG04449	skin:	fetal
30	chr9:71788748-71788798	AG09319	gingival:	n/a
31	chr9:71788748-71788798	RPTEC	kidney:	n/a
32	chr9:71787778-71787828	HRCEpiC	kidney:	n/a
33	chr9:71788748-71788798	MCF-7	breast:	n/a
34	chr9:71788748-71788798	IMR90	lung:	fetal
35	chr9:71789653-71789703	NHDF-neo	bronchial:	n/a
36	chr9:71787778-71787828	ovcar-3	ovarian:	n/a
37	chr9:71789653-71789703	SKMC	muscle:	n/a
38	chr9:71787778-71787828	HUVEC	blood vessel:	n/a
39	chr9:71788748-71788798	CMK	blood:	n/a
40	chr9:71788759-71788809	PFSK-1	brain:	n/a
41	chr9:71787778-71787828	SK-N-SH	brain:	n/a
42	chr9:71788748-71788798	HEK293	kidney:	embryo
43	chr9:71787778-71787828	BE2_C	brain:	n/a
44	chr9:71788748-71788798	PFSK-1	brain:	n/a
45	chr9:71789653-71789703	NHBE	bronchial:	n/a
46	chr9:71788759-71788809	HAEpiC	amniotic membrane:	n/a
47	chr9:71788759-71788809	NH-A	brain:	n/a
48	chr9:71788759-71788809	Hepatocyte	liver:	n/a
49	chr9:71788759-71788809	HEK293	kidney:	embryo
50	chr9:71788759-71788809	AoSMC	blood vessel:	n/a

(count:5 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr9:71790152..71792261-chr9:71797735..71799818,2	MCF-7	breast:
2	chr9:71733168..71738729-chr9:71786929..71793777,10	MCF-7	breast:
3	chr9:71734142..71739001-chr9:71788032..71795507,11	MCF-7	breast:
4	chr9:71780838..71784047-chr9:71785849..71788919,3	MCF-7	breast:
5	chr9:71789625..71792443-chr9:71836331..71838562,2	K562	blood:

No data

Variant related genes	Relation type
TJP2	TF binding region
TJP2	CpG island
ENSG00000119139	chromatin interactions

Extended variants
information (count: 113 )
Associated
traits (count: 57 )

Variant overlapped rSNPs/rCNVs (count:113 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs115685008	chr9:71787829-71787830	Enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
2	rs139629842	chr9:71787835-71787836	Enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs182433520	chr9:71787866-71787867	Enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs1416738	chr9:71787927-71787928	Enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
5	rs529700007	chr9:71788098-71788099	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs546694927	chr9:71788119-71788120	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs541462807	chr9:71788147-71788148	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
8	rs144339165	chr9:71788213-71788214	Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs530728563	chr9:71788216-71788217	Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
10	rs376032877	chr9:71788247-71788248	Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
11	rs114847434	chr9:71788262-71788263	Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
12	rs35001408	chr9:71788263-71788264	Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
13	rs564349650	chr9:71788323-71788324	Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
14	rs187074344	chr9:71788341-71788342	Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs13289162	chr9:71788347-71788348	Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
16	rs146090852	chr9:71788389-71788390	Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs566189624	chr9:71788411-71788412	Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
18	rs536705821	chr9:71788419-71788420	Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
19	rs548315352	chr9:71788450-71788451	Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
20	rs570000236	chr9:71788519-71788520	Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
21	rs12343999	chr9:71788522-71788523	Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
22	rs192983289	chr9:71788576-71788577	Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
23	rs562334287	chr9:71788579-71788580	Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
24	rs73449163	chr9:71788614-71788615	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Enhancers Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
25	rs534898285	chr9:71788646-71788647	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Enhancers Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
26	rs184235639	chr9:71788656-71788657	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Enhancers Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
27	rs201185353	chr9:71788711-71788712	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Enhancers Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
28	rs376910837	chr9:71788719-71788720	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Enhancers Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
29	rs12340435	chr9:71788750-71788751	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Enhancers Weak transcription	TF binding region CpG island Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
30	rs541873973	chr9:71788764-71788765	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Enhancers Weak transcription	TF binding region CpG island Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
31	rs563220036	chr9:71788797-71788798	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Enhancers Weak transcription	TF binding region CpG island Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
32	rs369141632	chr9:71788821-71788822	Active TSS Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
33	rs575220637	chr9:71788827-71788828	Active TSS Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
34	rs545476244	chr9:71788853-71788854	Active TSS Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
35	rs549191540	chr9:71788855-71788856	Active TSS Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
36	rs528357968	chr9:71788904-71788905	Active TSS Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
37	rs113137067	chr9:71788907-71788908	Active TSS Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
38	rs13301319	chr9:71788921-71788922	Active TSS Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
39	rs561839422	chr9:71788931-71788932	Active TSS Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
40	rs530154218	chr9:71788938-71788939	Active TSS Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
41	rs7860124	chr9:71788949-71788950	Active TSS Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
42	rs570030994	chr9:71788951-71788952	Active TSS Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
43	rs537500289	chr9:71788957-71788958	Active TSS Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
44	rs552112384	chr9:71788996-71788997	Active TSS Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
45	rs570811707	chr9:71789053-71789054	Active TSS Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
46	rs534957514	chr9:71789067-71789068	Active TSS Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
47	rs13285753	chr9:71789072-71789073	Active TSS Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
48	rs140590693	chr9:71789082-71789083	Active TSS Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
49	rs62567129	chr9:71789104-71789105	Active TSS Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
50	rs535649845	chr9:71789135-71789136	Active TSS Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:57)

Disease	PMID	Source
Breast cancer	17133270	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Medulloblastoma	21979893	CNVD
microdeletion syndrome	16199537	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Cancer	20164919	CNVD
Urothelial carcinoma	21177765	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
Melanoma	18172304	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Melanoma	22183965	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	16751803	CNVD
Myelofibrosis	22110671	CNVD
lymphocytic leukemia	21291569	CNVD
Leukemia	17361228	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Glioblastoma	16823260	CNVD
Leukemia	18688285	CNVD
Non-small cell lung cancer	21044232	CNVD
Brain cancer	20823417	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Renal cell carcinoma	19461508	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Heart disease	21282601	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Lung cancer	18438408	CNVD
small cell lung cancer	20016488	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	17899364	CNVD
Mantle cell lymphoma	19029149	CNVD
Hepatocellular carcinoma	16750200	CNVD
Acute myeloid leukemia	20729466	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Breast cancer	17603634	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Oral cancer	21386901	CNVD
Epilepsy	22083797	CNVD
Glioblastoma multiforme	21750150	CNVD
Cancer	21183584	CNVD
Bipolar disorder	18458673	CNVD

Chromatin state (count:507 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:71752000-71788600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr9:71755600-71788600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr9:71765000-71787800	Weak transcription	Left Ventricle	heart
4	chr9:71765000-71788600	Weak transcription	Gastric	stomach
5	chr9:71767600-71787800	Weak transcription	Fetal Heart	heart
6	chr9:71767600-71787800	Weak transcription	Rectal Smooth Muscle	rectum
7	chr9:71769000-71788000	Weak transcription	Fetal Kidney	kidney
8	chr9:71770600-71788600	Weak transcription	Esophagus	oesophagus
9	chr9:71770800-71788400	Weak transcription	Rectal Mucosa Donor 31	rectum
10	chr9:71770800-71788800	Weak transcription	Sigmoid Colon	Sigmoid Colon
11	chr9:71776200-71788000	Weak transcription	Pancreas	Pancrea
12	chr9:71777400-71788400	Weak transcription	Right Atrium	heart
13	chr9:71779600-71788600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
14	chr9:71780800-71787800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
15	chr9:71781000-71787800	Weak transcription	Fetal Stomach	stomach
16	chr9:71781400-71788600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
17	chr9:71781600-71787800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
18	chr9:71782000-71787800	Weak transcription	Fetal Intestine Small	intestine
19	chr9:71783800-71788200	Enhancers	Breast Myoepithelial Primary Cells	Breast
20	chr9:71783800-71788400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
21	chr9:71784000-71788200	Weak transcription	Fetal Lung	lung
22	chr9:71784000-71788400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
23	chr9:71784200-71787800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
24	chr9:71784200-71787800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
25	chr9:71784200-71787800	Weak transcription	Small Intestine	intestine
26	chr9:71784200-71787800	Weak transcription	Stomach Smooth Muscle	stomach
27	chr9:71784200-71788000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
28	chr9:71784200-71788400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
29	chr9:71784200-71788400	Weak transcription	Duodenum Mucosa	Duodenum
30	chr9:71784400-71787800	Weak transcription	Osteobl	bone
31	chr9:71784400-71788000	Weak transcription	Primary hematopoietic stem cells	blood
32	chr9:71784400-71788200	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
33	chr9:71784600-71788000	Weak transcription	GM12878-XiMat	blood
34	chr9:71785000-71788000	Weak transcription	Primary neutrophils fromperipheralblood	blood
35	chr9:71785800-71787800	Weak transcription	Skeletal Muscle Male	skeletal muscle
36	chr9:71785800-71788600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
37	chr9:71786000-71788200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
38	chr9:71786000-71788400	Weak transcription	H9 Cell Line	embryonic stem cell
39	chr9:71786000-71788400	Enhancers	Liver	Liver
40	chr9:71786200-71787800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
41	chr9:71786200-71787800	Weak transcription	Right Ventricle	heart
42	chr9:71786400-71787800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
43	chr9:71786400-71787800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
44	chr9:71786400-71788200	Enhancers	HepG2	liver
45	chr9:71786400-71788400	Enhancers	K562	blood
46	chr9:71786400-71788600	Enhancers	Placenta Amnion	Placenta Amnion
47	chr9:71786600-71787800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
48	chr9:71786600-71787800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
49	chr9:71786600-71787800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
50	chr9:71786600-71787800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin

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