Variant report

Variant	esv3374573
Chromosome Location	chr4:102266354-102269502
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr4:102268870-102269129	HepG2	liver:	n/a	n/a
2	ARID3A	chr4:102266883-102267082	HepG2	liver:	n/a	n/a
3	BACH1	chr4:102268296-102268651	H1-hESC	embryonic stem cell:	n/a	n/a
4	BACH1	chr4:102269007-102269398	H1-hESC	embryonic stem cell:	n/a	n/a
5	BACH1	chr4:102266603-102267217	H1-hESC	embryonic stem cell:	n/a	n/a
6	BCL3	chr4:102269133-102269684	A549	lung:	n/a	chr4:102269314-102269327 chr4:102269500-102269508 chr4:102269334-102269347 chr4:102269310-102269323
7	BCL3	chr4:102269158-102269648	A549	lung:	n/a	chr4:102269314-102269327 chr4:102269500-102269508 chr4:102269334-102269347 chr4:102269310-102269323
8	BCLAF1	chr4:102269101-102269432	GM12878	blood:	n/a	chr4:102269314-102269327 chr4:102269334-102269347 chr4:102269310-102269323
9	BHLHE40	chr4:102267821-102267970	K562	blood:	n/a	n/a
10	BHLHE40	chr4:102268827-102269533	K562	blood:	n/a	chr4:102269313-102269329 chr4:102269324-102269340 chr4:102269316-102269332
11	BHLHE40	chr4:102266870-102267476	GM12878	blood:	n/a	n/a
12	BHLHE40	chr4:102268204-102268609	K562	blood:	n/a	n/a
13	BHLHE40	chr4:102268064-102269557	GM12878	blood:	n/a	chr4:102269313-102269329 chr4:102269324-102269340 chr4:102269316-102269332
14	BRCA1	chr4:102267814-102267862	GM12878	blood:	n/a	n/a
15	BRCA1	chr4:102267314-102267339	GM12878	blood:	n/a	chr4:102267314-102267323
16	BRCA1	chr4:102268829-102269193	HepG2	liver:	n/a	n/a
17	BRCA1	chr4:102268747-102269426	Hela-S3	cervix:	n/a	n/a
18	BRCA1	chr4:102267844-102267962	Hela-S3	cervix:	n/a	n/a
19	CBX3	chr4:102269056-102269540	K562	blood:	n/a	n/a
20	CCNT2	chr4:102267791-102269472	K562	blood:	n/a	chr4:102268917-102268926 chr4:102267808-102267817
21	CEBPB	chr4:102267620-102267920	K562	blood:	n/a	chr4:102267752-102267763 chr4:102267752-102267761 chr4:102267750-102267761
22	CEBPB	chr4:102267624-102267908	ECC-1	luminal epithelium:	n/a	chr4:102267752-102267763 chr4:102267752-102267761 chr4:102267750-102267761
23	CEBPB	chr4:102267523-102268008	ECC-1	luminal epithelium:	n/a	chr4:102267752-102267763 chr4:102267752-102267761 chr4:102267750-102267761
24	CEBPB	chr4:102268910-102269318	IMR90	lung:	n/a	n/a
25	CEBPB	chr4:102267513-102268017	MCF-7	breast:	n/a	chr4:102267752-102267763 chr4:102267752-102267761 chr4:102267750-102267761
26	CEBPB	chr4:102267624-102267995	A549	lung:	n/a	chr4:102267752-102267763 chr4:102267752-102267761 chr4:102267750-102267761
27	CEBPB	chr4:102267589-102267957	HepG2	liver:	n/a	chr4:102267752-102267763 chr4:102267752-102267761 chr4:102267750-102267761
28	CEBPB	chr4:102268920-102269278	HepG2	liver:	n/a	n/a
29	CEBPB	chr4:102267344-102268145	IMR90	lung:	n/a	chr4:102267752-102267763 chr4:102267752-102267761 chr4:102267750-102267761
30	CEBPB	chr4:102267568-102267963	HepG2	liver:	n/a	chr4:102267752-102267763 chr4:102267752-102267761 chr4:102267750-102267761
31	CEBPB	chr4:102267603-102267949	H1-hESC	embryonic stem cell:	n/a	chr4:102267752-102267763 chr4:102267752-102267761 chr4:102267750-102267761
32	CEBPB	chr4:102267360-102267953	A549	lung:	n/a	chr4:102267752-102267763 chr4:102267752-102267761 chr4:102267750-102267761
33	CEBPB	chr4:102267592-102267975	K562	blood:	n/a	chr4:102267752-102267763 chr4:102267752-102267761 chr4:102267750-102267761
34	CEBPB	chr4:102266693-102266893	H1-hESC	embryonic stem cell:	n/a	n/a
35	CEBPB	chr4:102267616-102267982	HepG2	liver:	n/a	chr4:102267752-102267763 chr4:102267752-102267761 chr4:102267750-102267761
36	CEBPB	chr4:102267632-102267853	K562	blood:	n/a	chr4:102267752-102267763 chr4:102267752-102267761 chr4:102267750-102267761
37	CEBPB	chr4:102267668-102267854	HepG2	liver:	n/a	chr4:102267752-102267763 chr4:102267752-102267761 chr4:102267750-102267761
38	CEBPB	chr4:102269028-102269244	H1-hESC	embryonic stem cell:	n/a	n/a
39	CEBPB	chr4:102267513-102269351	Hela-S3	cervix:	n/a	chr4:102267752-102267763 chr4:102267752-102267761 chr4:102268839-102268847 chr4:102267750-102267761
40	CEBPB	chr4:102267606-102268054	A549	lung:	n/a	chr4:102267752-102267763 chr4:102267752-102267761 chr4:102267750-102267761
41	CEBPD	chr4:102268454-102269260	HepG2	liver:	n/a	n/a
42	CEBPD	chr4:102267582-102267921	HepG2	liver:	n/a	chr4:102267751-102267762
43	CEBPD	chr4:102267609-102267818	HepG2	liver:	n/a	chr4:102267751-102267762
44	CHD1	chr4:102267832-102268002	H1-hESC	embryonic stem cell:	n/a	n/a
45	CHD1	chr4:102266915-102267074	H1-hESC	embryonic stem cell:	n/a	n/a
46	CHD1	chr4:102269015-102269384	H1-hESC	embryonic stem cell:	n/a	n/a
47	CHD2	chr4:102266600-102267961	HepG2	liver:	n/a	n/a
48	CHD2	chr4:102266812-102267355	H1-hESC	embryonic stem cell:	n/a	n/a
49	CHD2	chr4:102268188-102269502	HepG2	liver:	n/a	n/a
50	CHD2	chr4:102267781-102267981	H1-hESC	embryonic stem cell:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr4:102268075-102268125	GM19239	blood:	n/a
2	chr4:102267974-102268024	HepG2	liver:	n/a
3	chr4:102268949-102268999	NT2-D1	testis:	n/a
4	chr4:102268075-102268125	GM19239	blood:	n/a
5	chr4:102267974-102268024	HepG2	liver:	n/a
6	chr4:102268949-102268999	NT2-D1	testis:	n/a
7	chr4:102267366-102267416	HNPCEpiC	eye:	n/a
8	chr4:102269374-102269424	GM06990	blood:	n/a
9	chr4:102267366-102267416	RPTEC	kidney:	n/a
10	chr4:102266325-102266375	PANC-1	pancreas:	n/a
11	chr4:102266325-102266375	AG09319	gingival:	n/a
12	chr4:102268245-102268295	GM19239	blood:	n/a
13	chr4:102269425-102269475	GM19239	blood:	n/a
14	chr4:102267366-102267416	SK-N-MC	brain:	n/a
15	chr4:102267189-102267239	AG04449	skin:	fetal
16	chr4:102267366-102267416	NT2-D1	testis:	n/a
17	chr4:102268075-102268125	A549	lung:	n/a
18	chr4:102267974-102268024	HIPEpiC	eye:	n/a
19	chr4:102268125-102268175	Hela-S3	cervix:	n/a
20	chr4:102267974-102268024	HEEpiC	esophagus:	n/a
21	chr4:102268125-102268175	Jurkat	blood:	n/a
22	chr4:102268949-102268999	HMEC	breast:	n/a
23	chr4:102268821-102268871	HepG2	liver:	n/a
24	chr4:102269374-102269424	Hela-S3	cervix:	n/a
25	chr4:102268622-102268672	PANC-1	pancreas:	n/a
26	chr4:102268949-102268999	AG04449	skin:	fetal
27	chr4:102268799-102268849	H1-hESC	embryonic stem cell:	embryo
28	chr4:102268821-102268871	HCM	heart:	n/a
29	chr4:102268821-102268871	HMEC	breast:	n/a
30	chr4:102267974-102268024	AG10803	skin:	n/a
31	chr4:102268799-102268849	MCF-7	breast:	n/a
32	chr4:102268854-102268904	SKMC	muscle:	n/a
33	chr4:102268622-102268672	MCF-7	breast:	n/a
34	chr4:102269425-102269475	AoSMC	blood vessel:	n/a
35	chr4:102268821-102268871	Caco-2	colon:	n/a
36	chr4:102268125-102268175	HAEpiC	amniotic membrane:	n/a
37	chr4:102268245-102268295	NT2-D1	testis:	n/a
38	chr4:102268821-102268871	AG09319	gingival:	n/a
39	chr4:102268075-102268125	NB4	blood:	n/a
40	chr4:102266325-102266375	AG09309	skin:	n/a
41	chr4:102269374-102269424	RPTEC	kidney:	n/a
42	chr4:102268075-102268125	NT2-D1	testis:	n/a
43	chr4:102267974-102268024	HRE	kidney:	n/a
44	chr4:102268075-102268125	HRCEpiC	kidney:	n/a
45	chr4:102268854-102268904	AG09319	gingival:	n/a
46	chr4:102269374-102269424	Caco-2	colon:	n/a
47	chr4:102269374-102269424	HCM	heart:	n/a
48	chr4:102268245-102268295	T-47D	breast:	n/a
49	chr4:102268245-102268295	NB4	blood:	n/a
50	chr4:102266325-102266375	HMEC	breast:	n/a

No.	Distal block	Cell Line	Cell type
1	chr4:102265718..102267485-chr4:103187307..103189886,2	MCF-7	breast:
2	chr4:102263328..102265199-chr4:102265515..102267436,2	K562	blood:
3	chr4:100869383..100871934-chr4:102267599..102271042,3	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-AP001816.1.1-1	chr4:102268934-102269166	NR_033874
2	lnc-AP001816.1.1-1	chr4:102269481-102270040	NR_033874
3	lnc-EMCN-3	chr4:102265025-102267178	NONHSAT097571

Variant related genes	Relation type
ENSG00000254531	TF binding region
PPP3CA	TF binding region
ENSG00000254531	CpG island
PPP3CA	CpG island
ENSG00000245322	chromatin interactions
ENSG00000164032	chromatin interactions

Extended variants
information (count: 117 )
Associated
traits (count: 74 )

Variant overlapped rSNPs/rCNVs (count:117 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs113786586	chr4:102266367-102266368	Enhancers Weak transcription Active TSS Flanking Active TSS	TF binding region CpG island lncRNA	1 gene(s)	Overlapped CNVs	n/a
2	rs200542037	chr4:102266399-102266400	Enhancers Weak transcription Active TSS Flanking Active TSS	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
3	rs529428973	chr4:102266414-102266415	Flanking Active TSS Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
4	rs547493692	chr4:102266429-102266430	Flanking Active TSS Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
5	rs182272662	chr4:102266524-102266525	Flanking Active TSS Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
6	rs145612022	chr4:102266527-102266528	Flanking Active TSS Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
7	rs551135053	chr4:102266540-102266541	Flanking Active TSS Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
8	rs569658064	chr4:102266562-102266563	Flanking Active TSS Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
9	rs578084401	chr4:102266581-102266582	Flanking Active TSS Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
10	rs537375218	chr4:102266582-102266583	Flanking Active TSS Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
11	rs549274714	chr4:102266626-102266627	Active TSS Flanking Active TSS Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
12	rs201750407	chr4:102266645-102266646	Active TSS Flanking Active TSS Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
13	rs567490568	chr4:102266684-102266685	Active TSS Flanking Active TSS Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
14	rs534483466	chr4:102266700-102266701	Active TSS Flanking Active TSS Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
15	rs146518523	chr4:102266706-102266707	Active TSS Flanking Active TSS Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
16	rs545597023	chr4:102266719-102266720	Active TSS Flanking Active TSS Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
17	rs3789755	chr4:102266761-102266762	Active TSS Flanking Active TSS Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region lncRNA	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
18	rs73835942	chr4:102266806-102266807	Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
19	rs557771820	chr4:102266818-102266819	Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
20	rs3827775	chr4:102266838-102266839	Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
21	rs186411137	chr4:102266851-102266852	Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
22	rs543735049	chr4:102266868-102266869	Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
23	rs562018910	chr4:102266927-102266928	Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
24	rs573914719	chr4:102266939-102266940	Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
25	rs541228006	chr4:102266941-102266942	Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
26	rs572700043	chr4:102266943-102266944	Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
27	rs73835943	chr4:102266949-102266950	Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region lncRNA	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
28	rs532923084	chr4:102266967-102266968	Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
29	rs140967622	chr4:102266985-102266986	Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
30	rs561635227	chr4:102267017-102267018	Active TSS Flanking Active TSS Bivalent/Poised TSS	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
31	rs530487807	chr4:102267042-102267043	Active TSS Flanking Active TSS Bivalent/Poised TSS	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
32	rs549313679	chr4:102267054-102267055	Active TSS Flanking Active TSS Bivalent/Poised TSS	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
33	rs74885981	chr4:102267056-102267057	Active TSS Flanking Active TSS Bivalent/Poised TSS	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
34	rs200907376	chr4:102267074-102267075	Active TSS Flanking Active TSS Bivalent/Poised TSS	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
35	rs144793981	chr4:102267157-102267158	Active TSS Flanking Active TSS Bivalent/Poised TSS	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
36	rs555909499	chr4:102267205-102267206	Active TSS Flanking Active TSS Weak transcription	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
37	rs546523983	chr4:102267252-102267253	Active TSS Flanking Active TSS Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
38	rs574547303	chr4:102267302-102267303	Active TSS Flanking Active TSS Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
39	rs539584585	chr4:102267324-102267325	Active TSS Flanking Active TSS Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
40	rs190036042	chr4:102267344-102267345	Active TSS Flanking Active TSS Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
41	rs576052900	chr4:102267373-102267374	Active TSS Flanking Active TSS Weak transcription	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
42	rs537015994	chr4:102267378-102267379	Active TSS Flanking Active TSS Weak transcription	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
43	rs555651784	chr4:102267399-102267400	Active TSS Flanking Active TSS Weak transcription	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
44	rs28660297	chr4:102267410-102267411	Active TSS Flanking Active TSS Weak transcription	TF binding region CpG island	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs2583391	chr4:102267453-102267454	Active TSS Flanking Active TSS Weak transcription	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
46	rs113086344	chr4:102267507-102267508	Active TSS Flanking Active TSS Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
47	rs541866054	chr4:102267512-102267513	Active TSS Flanking Active TSS Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
48	rs578105720	chr4:102267691-102267692	Active TSS Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
49	rs200427644	chr4:102267816-102267817	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
50	rs201159854	chr4:102267818-102267819	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:74)

Disease	PMID	Source
Acute lymphoblastic leukemia	22237106	CNVD
Glioblastoma multiforme	21080181	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
HIV/AIDS	22032296	CNVD
Medulloblastoma	21979893	CNVD
Neuroblastoma	18923191	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Breast cancer	21858162	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Gastric cancer	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Melanoma	18172304	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	17603634	CNVD
Hepatocellular carcinoma	16750200	CNVD
Myxofibrosarcoma	16751306	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Breast cancer	16272173	CNVD
Colorectal cancer	19359472	CNVD
Malignant mesothelioma	18160781	CNVD
Medulloblastoma	18056178	CNVD
Multiple myeloma	17077331	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Oral squamous cell carcinoma	17134496	CNVD
4q-syndrome	17576883	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Colorectal cancer	20709793	CNVD
Muscular dystrophy	21149563	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Cervical cancer	21062161	CNVD
Metanephric adenoma	20802469	CNVD
Breast cancer	16608533	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Lung cancer	19208797	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	21785460	CNVD
Myelodysplastic syndrome	21251322	CNVD
Lung cancer	18438408	CNVD
Cancer	22429812	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	21183584	CNVD
primary effusion lymphomas	17116491	CNVD
small cell lung cancer	20016488	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	17133270	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Colorectal cancer	20459617	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Hirschsprung''s Disease	21712996	CNVD
Congenital anomalies of the kidney and urinary tract	20505237	CNVD
Breast cancer	17393978	CNVD
Ovarian cancer	21720365	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Esophageal cancer	21851588	CNVD
Prostate cancer	16573809	CNVD
Multiple myeloma	16616336	CNVD
Melanoma	20688739	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	16397240	CNVD
Acute myeloid leukemia	18000384	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:362 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:102249600-102266400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr4:102252800-102266400	Weak transcription	Rectal Smooth Muscle	rectum
3	chr4:102254000-102266600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr4:102255200-102266400	Weak transcription	Gastric	stomach
5	chr4:102255400-102266600	Weak transcription	Fetal Muscle Leg	muscle
6	chr4:102257000-102266400	Weak transcription	Left Ventricle	heart
7	chr4:102257000-102266400	Weak transcription	Rectal Mucosa Donor 31	rectum
8	chr4:102257000-102266400	Weak transcription	Right Ventricle	heart
9	chr4:102257000-102266400	Weak transcription	Sigmoid Colon	Sigmoid Colon
10	chr4:102257600-102266600	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
11	chr4:102258200-102266400	Weak transcription	Spleen	Spleen
12	chr4:102258800-102266400	Weak transcription	HSMM	muscle
13	chr4:102259000-102266400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
14	chr4:102259200-102266600	Weak transcription	Pancreas	Pancrea
15	chr4:102260400-102266400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
16	chr4:102260400-102266400	Weak transcription	Small Intestine	intestine
17	chr4:102261800-102266600	Weak transcription	Placenta	Placenta
18	chr4:102263400-102266400	Enhancers	Brain Substantia Nigra	brain
19	chr4:102264000-102266400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
20	chr4:102264200-102266400	Weak transcription	Psoas Muscle	Psoas
21	chr4:102264400-102266400	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
22	chr4:102264800-102266400	Weak transcription	HUES48 Cell Line	embryonic stem cell
23	chr4:102264800-102266400	Enhancers	Dnd41	blood
24	chr4:102265600-102266400	Enhancers	Primary T cells from cord blood	blood
25	chr4:102265600-102266400	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
26	chr4:102265600-102266400	Enhancers	Primary T helper cells fromperipheralblood	blood
27	chr4:102265600-102269800	Active TSS	NHLF	lung
28	chr4:102265800-102266400	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
29	chr4:102265800-102266400	Enhancers	Primary monocytes fromperipheralblood	blood
30	chr4:102265800-102266400	Enhancers	Primary B cells from peripheral blood	blood
31	chr4:102265800-102266400	Enhancers	Primary T regulatory cells fromperipheralblood	blood
32	chr4:102265800-102266400	Flanking Active TSS	Brain Hippocampus Middle	brain
33	chr4:102265800-102266400	Enhancers	Skeletal Muscle Male	skeletal muscle
34	chr4:102265800-102266600	Enhancers	Primary T killer naive cells fromperipheralblood	blood
35	chr4:102265800-102266600	Enhancers	Primary T killer memory cells from peripheral blood	blood
36	chr4:102265800-102266600	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
37	chr4:102265800-102266600	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
38	chr4:102265800-102266600	Enhancers	Fetal Intestine Large	intestine
39	chr4:102265800-102266800	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
40	chr4:102265800-102266800	Flanking Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
41	chr4:102265800-102266800	Flanking Active TSS	Fetal Brain Female	brain
42	chr4:102265800-102267000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
43	chr4:102265800-102267000	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
44	chr4:102265800-102267400	Flanking Active TSS	Primary B cells from cord blood	blood
45	chr4:102265800-102269800	Active TSS	Brain Angular Gyrus	brain
46	chr4:102265800-102270000	Active TSS	Fetal Kidney	kidney
47	chr4:102266000-102266400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
48	chr4:102266000-102266400	Active TSS	iPS-20b Cell Line	embryonic stem cell
49	chr4:102266000-102266400	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
50	chr4:102266000-102266400	Flanking Active TSS	Brain Cingulate Gyrus	brain

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