Variant report

Variant	esv3374626
Chromosome Location	chr6:26520998-26523546
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:957)
CpG islands
(count:610)
Chromatin interactive
region (count:47)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:957 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:26521339-26521708	HepG2	liver:	n/a	n/a
2	ARID3A	chr6:26521889-26521981	K562	blood:	n/a	n/a
3	ARID3A	chr6:26523331-26523351	HepG2	liver:	n/a	n/a
4	ARID3A	chr6:26523179-26523492	K562	blood:	n/a	n/a
5	ATF1	chr6:26523184-26523442	K562	blood:	n/a	n/a
6	ATF2	chr6:26521251-26521774	GM12878	blood:	n/a	n/a
7	ATF2	chr6:26521341-26521782	H1-hESC	embryonic stem cell:	n/a	n/a
8	ATF2	chr6:26521333-26521760	GM12878	blood:	n/a	n/a
9	ATF2	chr6:26521318-26522136	H1-hESC	embryonic stem cell:	n/a	n/a
10	ATF3	chr6:26521137-26521823	HCT-116	colon:	n/a	n/a
11	ATF3	chr6:26521135-26521822	HCT-116	colon:	n/a	n/a
12	ATF3	chr6:26521137-26521846	A549	lung:	n/a	n/a
13	ATF3	chr6:26521073-26522259	K562	blood:	n/a	chr6:26522056-26522065
14	ATF3	chr6:26521220-26522244	A549	lung:	n/a	chr6:26522056-26522065
15	BACH1	chr6:26521341-26521899	H1-hESC	embryonic stem cell:	n/a	n/a
16	BATF	chr6:26521338-26521593	GM12878	blood:	n/a	n/a
17	BATF	chr6:26521319-26521573	GM12878	blood:	n/a	n/a
18	BCL11A	chr6:26521245-26521668	GM12878	blood:	n/a	n/a
19	BCL11A	chr6:26521352-26521605	GM12878	blood:	n/a	n/a
20	BCLAF1	chr6:26521342-26521700	GM12878	blood:	n/a	n/a
21	BCLAF1	chr6:26521186-26522264	GM12878	blood:	n/a	n/a
22	BDP1	chr6:26521234-26521618	K562	blood:	n/a	n/a
23	BDP1	chr6:26521229-26521688	Hela-S3	cervix:	n/a	n/a
24	BHLHE40	chr6:26521926-26522531	K562	blood:	n/a	n/a
25	BHLHE40	chr6:26520433-26521031	K562	blood:	n/a	n/a
26	BHLHE40	chr6:26521371-26522338	GM12878	blood:	n/a	n/a
27	BHLHE40	chr6:26521365-26521604	HepG2	liver:	n/a	n/a
28	BHLHE40	chr6:26520683-26521021	HepG2	liver:	n/a	n/a
29	BRCA1	chr6:26521359-26521824	GM12878	blood:	n/a	n/a
30	BRCA1	chr6:26521372-26521799	H1-hESC	embryonic stem cell:	n/a	n/a
31	BRCA1	chr6:26521167-26522022	Hela-S3	cervix:	n/a	n/a
32	BRF1	chr6:26521243-26521595	K562	blood:	n/a	n/a
33	BRF1	chr6:26521265-26521588	Hela-S3	cervix:	n/a	n/a
34	CBX3	chr6:26520534-26521061	K562	blood:	n/a	n/a
35	CBX3	chr6:26521223-26522686	K562	blood:	n/a	n/a
36	CCNT2	chr6:26521851-26522457	K562	blood:	n/a	n/a
37	CCNT2	chr6:26521141-26521617	K562	blood:	n/a	chr6:26521334-26521343 chr6:26521348-26521357
38	CEBPB	chr6:26521352-26522048	K562	blood:	n/a	chr6:26521720-26521733
39	CEBPB	chr6:26522789-26523530	K562	blood:	n/a	n/a
40	CEBPB	chr6:26521396-26521805	K562	blood:	n/a	chr6:26521720-26521733
41	CEBPB	chr6:26523122-26523392	A549	lung:	n/a	n/a
42	CEBPB	chr6:26523123-26523374	K562	blood:	n/a	n/a
43	CEBPB	chr6:26523074-26523399	K562	blood:	n/a	n/a
44	CEBPB	chr6:26521151-26521853	GM12878	blood:	n/a	chr6:26521720-26521733
45	CEBPB	chr6:26521366-26521719	H1-hESC	embryonic stem cell:	n/a	n/a
46	CEBPB	chr6:26521322-26521626	HepG2	liver:	n/a	n/a
47	CEBPB	chr6:26523150-26523363	HepG2	liver:	n/a	n/a
48	CEBPB	chr6:26521341-26521639	GM12878	blood:	n/a	n/a
49	CEBPB	chr6:26521223-26521981	A549	lung:	n/a	chr6:26521720-26521733
50	CEBPB	chr6:26521373-26522185	Hela-S3	cervix:	n/a	chr6:26521720-26521733

(count:610 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:26522904-26522954	LNCaP	prostate:	n/a
2	chr6:26521272-26521322	GM12878	blood:	n/a
3	chr6:26521272-26521322	AoSMC	blood vessel:	n/a
4	chr6:26521747-26521797	NT2-D1	testis:	n/a
5	chr6:26521005-26521055	Hela-S3	cervix:	n/a
6	chr6:26522904-26522954	NT2-D1	testis:	n/a
7	chr6:26522904-26522954	HCT-116	colon:	n/a
8	chr6:26521696-26521746	MCF10A-Er-Src	breast:	n/a
9	chr6:26521747-26521797	NB4	blood:	n/a
10	chr6:26522904-26522954	HRE	kidney:	n/a
11	chr6:26522325-26522375	NH-A	brain:	n/a
12	chr6:26521385-26521435	AG10803	skin:	n/a
13	chr6:26522136-26522186	NHBE	bronchial:	n/a
14	chr6:26521272-26521322	NB4	blood:	n/a
15	chr6:26521980-26522030	HCT-116	colon:	n/a
16	chr6:26521747-26521797	SK-N-SH_RA	brain:	n/a
17	chr6:26521980-26522030	HRE	kidney:	n/a
18	chr6:26521272-26521322	HEK293	kidney:	embryo
19	chr6:26521385-26521435	SAEC	small airway:	n/a
20	chr6:26522136-26522186	GM12891	blood:	n/a
21	chr6:26522904-26522954	ECC-1	luminal epithelium:	n/a
22	chr6:26521980-26522030	NT2-D1	testis:	n/a
23	chr6:26521696-26521746	A549	lung:	n/a
24	chr6:26521385-26521435	IMR90	lung:	fetal
25	chr6:26521980-26522030	AG09309	skin:	n/a
26	chr6:26521005-26521055	H1-hESC	embryonic stem cell:	embryo
27	chr6:26521696-26521746	SK-N-SH_RA	brain:	n/a
28	chr6:26521696-26521746	AG04450	lung:	fetal
29	chr6:26521272-26521322	K562	blood:	n/a
30	chr6:26522904-26522954	MCF-7	breast:	n/a
31	chr6:26522325-26522375	A549	lung:	n/a
32	chr6:26522136-26522186	HRCEpiC	kidney:	n/a
33	chr6:26522325-26522375	HMEC	breast:	n/a
34	chr6:26521272-26521322	HCF	heart:	n/a
35	chr6:26521005-26521055	HCPEpiC	choroid plexus:	n/a
36	chr6:26521385-26521435	GM12892	blood:	n/a
37	chr6:26522136-26522186	RPTEC	kidney:	n/a
38	chr6:26522325-26522375	NHBE	bronchial:	n/a
39	chr6:26522136-26522186	IMR90	lung:	fetal
40	chr6:26522904-26522954	Hela-S3	cervix:	n/a
41	chr6:26522136-26522186	HepG2	liver:	n/a
42	chr6:26521980-26522030	GM19239	blood:	n/a
43	chr6:26521005-26521055	PANC-1	pancreas:	n/a
44	chr6:26522904-26522954	GM19239	blood:	n/a
45	chr6:26521696-26521746	HL-60	blood:	n/a
46	chr6:26521696-26521746	AG09319	gingival:	n/a
47	chr6:26521747-26521797	AG09319	gingival:	n/a
48	chr6:26522578-26522628	ProgFib	skin:	n/a
49	chr6:26522578-26522628	MCF10A-Er-Src	breast:	n/a
50	chr6:26522325-26522375	PrEC	prostate:	n/a

(count:47 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr6:26521728..26524870-chr6:26525559..26528465,3	MCF-7	breast:
2	chr6:26198124..26199998-chr6:26520705..26522799,2	K562	blood:
3	chr6:26520764..26524239-chr6:26594606..26597481,4	K562	blood:
4	chr6:26522739..26526214-chr6:26594718..26597971,4	K562	blood:
5	chr6:26383299..26384986-chr6:26520070..26522600,2	K562	blood:
6	chr6:26352176..26356420-chr6:26519489..26524545,4	K562	blood:
7	chr6:26195075..26199998-chr6:26518402..26523264,7	K562	blood:
8	chr6:26187831..26190328-chr6:26520761..26523308,3	K562	blood:
9	chr6:26283829..26285786-chr6:26519588..26522507,3	K562	blood:
10	chr6:26420245..26422646-chr6:26519763..26522632,2	K562	blood:
11	chr6:26229652..26232354-chr6:26520028..26522000,2	K562	blood:
12	chr6:26319791..26322184-chr6:26520367..26521947,2	K562	blood:
13	chr6:26360935..26366570-chr6:26520779..26523276,5	K562	blood:
14	chr6:26187760..26190799-chr6:26518890..26523308,5	K562	blood:
15	chr6:26399787..26402548-chr6:26520304..26522588,2	K562	blood:
16	chr6:26420252..26422779-chr6:26519711..26522673,2	K562	blood:
17	chr6:26457960..26461047-chr6:26519488..26522400,3	MCF-7	breast:
18	chr6:26101462..26104336-chr6:26520946..26522887,2	MCF-7	breast:
19	chr6:26234528..26236146-chr6:26520612..26523386,2	K562	blood:
20	chr6:26122811..26125684-chr6:26519933..26522732,4	K562	blood:
21	chr6:26248591..26251636-chr6:26519454..26522320,3	K562	blood:
22	chr6:26522198..26522805-chr7:86781872..86782576,2	Hela-S3	cervix:
23	chr6:26217116..26219858-chr6:26520988..26523268,4	K562	blood:
24	chr6:26284286..26286997-chr6:26519588..26522057,2	K562	blood:
25	chr6:26352931..26356420-chr6:26520848..26524138,3	K562	blood:
26	chr6:26157128..26159753-chr6:26519202..26521718,3	K562	blood:
27	chr6:26439181..26441832-chr6:26522312..26525308,2	K562	blood:
28	chr5:44809278..44810132-chr6:26520519..26521156,2	Hela-S3	cervix:
29	chr6:26364672..26366648-chr6:26519902..26522691,2	K562	blood:
30	chr6:26517743..26520869-chr6:26521157..26524450,4	MCF-7	breast:
31	chr17:8339183..8340052-chr6:26520850..26521728,2	Hela-S3	cervix:
32	chr6:26400255..26403237-chr6:26521906..26524697,3	K562	blood:
33	chr6:26520627..26522671-chr6:26536742..26539578,4	MCF-7	breast:
34	chr6:26297237..26299588-chr6:26519952..26522018,2	K562	blood:
35	chr6:6857012..6857665-chr6:26522158..26523073,2	Hela-S3	cervix:
36	chr6:26519250..26523737-chr6:27099178..27105777,8	K562	blood:
37	chr16:31191297..31191881-chr6:26521900..26522799,2	Hela-S3	cervix:
38	chr6:26215412..26219085-chr6:26518224..26524021,6	K562	blood:
39	chr6:26518768..26523261-chr6:26527138..26531427,8	MCF-7	breast:
40	chr21:18884495..18885488-chr6:26521673..26522260,2	Hela-S3	cervix:
41	chr6:26440218..26442900-chr6:26520172..26522018,2	K562	blood:
42	chr6:26520458..26524632-chr6:26536427..26540091,8	MCF-7	breast:
43	chr6:26341603..26342500-chr6:26520725..26521500,3	K562	blood:
44	chr6:26520371..26522004-chr6:27113193..27114715,2	K562	blood:
45	chr1:148241128..148242065-chr6:26522075..26522709,2	Hela-S3	cervix:
46	chr6:26122246..26124996-chr6:26519353..26522732,3	K562	blood:
47	chr6:26203687..26207464-chr6:26521178..26524047,5	K562	blood:

No data

Variant related genes	Relation type
HCG11	TF binding region
ENSG00000261353	TF binding region
RNU6-502P	TF binding region
HCG11	CpG island
ENSG00000261353	CpG island
RNU6-502P	CpG island
ENSG00000180596	chromatin interactions
ENSG00000197061	chromatin interactions
ENSG00000158373	chromatin interactions
ENSG00000112763	chromatin interactions
ENSG00000154639	chromatin interactions
ENSG00000166579	chromatin interactions
ENSG00000180573	chromatin interactions
ENSG00000187990	chromatin interactions
ENSG00000186470	chromatin interactions
ENSG00000261353	chromatin interactions
ENSG00000197903	chromatin interactions
ENSG00000182952	chromatin interactions
ENSG00000197409	chromatin interactions
ENSG00000168274	chromatin interactions
ENSG00000112996	chromatin interactions
ENSG00000207501	chromatin interactions
ENSG00000111801	chromatin interactions
ENSG00000216331	chromatin interactions
ENSG00000146109	chromatin interactions
ENSG00000124508	chromatin interactions
ENSG00000197846	chromatin interactions
ENSG00000124549	chromatin interactions
ENSG00000135164	chromatin interactions
ENSG00000188987	chromatin interactions
ENSG00000215979	chromatin interactions
ENSG00000089280	chromatin interactions
ENSG00000026950	chromatin interactions
ENSG00000252399	chromatin interactions
ENSG00000196787	chromatin interactions
ENSG00000196866	chromatin interactions
ENSG00000256316	chromatin interactions
ENSG00000158406	chromatin interactions
ENSG00000124575	chromatin interactions
ENSG00000124635	chromatin interactions
ENSG00000198518	chromatin interactions
ENSG00000199289	chromatin interactions

Extended variants
information (count: 107 )
Associated
traits (count: 101 )

Variant overlapped rSNPs/rCNVs (count:107 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs6924865	chr6:26521353-26521354	Active TSS Enhancers Weak transcription ZNF genes & repeats	TF binding region Chromatin interactive region	33 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs568805438	chr6:26521356-26521357	Active TSS Enhancers Weak transcription ZNF genes & repeats	TF binding region Chromatin interactive region	33 gene(s)	Overlapped CNVs	n/a
3	rs115181423	chr6:26521359-26521360	Active TSS Enhancers Weak transcription ZNF genes & repeats	TF binding region Chromatin interactive region	33 gene(s)	Overlapped CNVs	n/a
4	rs547826869	chr6:26521377-26521378	Active TSS Enhancers Weak transcription ZNF genes & repeats	TF binding region Chromatin interactive region	33 gene(s)	Overlapped CNVs	n/a
5	rs568403854	chr6:26521395-26521396	Active TSS Enhancers Weak transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	33 gene(s)	Overlapped CNVs	n/a
6	rs534252545	chr6:26521419-26521420	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers	TF binding region CpG island Chromatin interactive region	33 gene(s)	Overlapped CNVs	n/a
7	rs556702486	chr6:26521420-26521421	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers	TF binding region CpG island Chromatin interactive region	33 gene(s)	Overlapped CNVs	n/a
8	rs117260370	chr6:26521421-26521422	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers	TF binding region CpG island Chromatin interactive region	33 gene(s)	Overlapped CNVs	n/a
9	rs188375743	chr6:26521422-26521423	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers	TF binding region CpG island Chromatin interactive region	33 gene(s)	Overlapped CNVs	n/a
10	rs576337082	chr6:26521423-26521424	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers	TF binding region CpG island Chromatin interactive region	33 gene(s)	Overlapped CNVs	n/a
11	rs535842084	chr6:26521425-26521426	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers	TF binding region CpG island Chromatin interactive region	33 gene(s)	Overlapped CNVs	n/a
12	rs555832727	chr6:26521426-26521427	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers	TF binding region CpG island Chromatin interactive region	33 gene(s)	Overlapped CNVs	n/a
13	rs574763831	chr6:26521427-26521428	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers	TF binding region CpG island Chromatin interactive region	33 gene(s)	Overlapped CNVs	n/a
14	rs540555961	chr6:26521428-26521429	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers	TF binding region CpG island Chromatin interactive region	33 gene(s)	Overlapped CNVs	n/a
15	rs560263265	chr6:26521429-26521430	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers	TF binding region CpG island Chromatin interactive region	33 gene(s)	Overlapped CNVs	n/a
16	rs576975850	chr6:26521432-26521433	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers	TF binding region CpG island Chromatin interactive region	33 gene(s)	Overlapped CNVs	n/a
17	rs191367146	chr6:26521433-26521434	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers	TF binding region CpG island Chromatin interactive region	33 gene(s)	Overlapped CNVs	n/a
18	rs562438758	chr6:26521434-26521435	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers	TF binding region CpG island Chromatin interactive region	33 gene(s)	Overlapped CNVs	n/a
19	rs6925047	chr6:26521435-26521436	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers	TF binding region CpG island Chromatin interactive region	33 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
20	rs557483888	chr6:26521440-26521441	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers	TF binding region Chromatin interactive region	33 gene(s)	Overlapped CNVs	n/a
21	rs547765056	chr6:26521444-26521445	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers	TF binding region Chromatin interactive region	33 gene(s)	Overlapped CNVs	n/a
22	rs572695065	chr6:26521454-26521455	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers	TF binding region Chromatin interactive region	33 gene(s)	Overlapped CNVs	n/a
23	rs540074857	chr6:26521455-26521456	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers	TF binding region Chromatin interactive region	33 gene(s)	Overlapped CNVs	n/a
24	rs569765223	chr6:26521465-26521466	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers	TF binding region Chromatin interactive region	33 gene(s)	Overlapped CNVs	n/a
25	rs561631683	chr6:26521474-26521475	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers	TF binding region Chromatin interactive region	33 gene(s)	Overlapped CNVs	n/a
26	rs527950945	chr6:26521475-26521476	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers	TF binding region Chromatin interactive region	33 gene(s)	Overlapped CNVs	n/a
27	rs573878675	chr6:26521477-26521478	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers	TF binding region Chromatin interactive region	33 gene(s)	Overlapped CNVs	n/a
28	rs183855603	chr6:26521483-26521484	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers	TF binding region Chromatin interactive region	33 gene(s)	Overlapped CNVs	n/a
29	rs189360088	chr6:26521484-26521485	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers	TF binding region Chromatin interactive region	33 gene(s)	Overlapped CNVs	n/a
30	rs192544521	chr6:26521488-26521489	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers	TF binding region Chromatin interactive region	33 gene(s)	Overlapped CNVs	n/a
31	rs550392249	chr6:26521494-26521495	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers	TF binding region Chromatin interactive region	33 gene(s)	Overlapped CNVs	n/a
32	rs530487361	chr6:26521497-26521498	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers	TF binding region Chromatin interactive region	33 gene(s)	Overlapped CNVs	n/a
33	rs570037226	chr6:26521501-26521502	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers	TF binding region Chromatin interactive region	33 gene(s)	Overlapped CNVs	n/a
34	rs371678231	chr6:26521502-26521503	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers	TF binding region Chromatin interactive region	33 gene(s)	Overlapped CNVs	n/a
35	rs149386371	chr6:26521508-26521509	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers	TF binding region Chromatin interactive region	33 gene(s)	Overlapped CNVs	n/a
36	rs77394369	chr6:26521515-26521516	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers	TF binding region Chromatin interactive region	33 gene(s)	Overlapped CNVs	n/a
37	rs6905163	chr6:26521520-26521521	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers	TF binding region Chromatin interactive region	33 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
38	rs185071025	chr6:26521522-26521523	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers	TF binding region Chromatin interactive region	33 gene(s)	Overlapped CNVs	n/a
39	rs534041935	chr6:26521525-26521526	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers	TF binding region Chromatin interactive region	33 gene(s)	Overlapped CNVs	n/a
40	rs148520926	chr6:26521526-26521527	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers	TF binding region Chromatin interactive region	33 gene(s)	Overlapped CNVs	n/a
41	rs577115406	chr6:26521529-26521530	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers	TF binding region Chromatin interactive region	33 gene(s)	Overlapped CNVs	n/a
42	rs545667942	chr6:26521530-26521531	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers	TF binding region Chromatin interactive region	33 gene(s)	Overlapped CNVs	n/a
43	rs562735162	chr6:26521533-26521534	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers	TF binding region Chromatin interactive region	33 gene(s)	Overlapped CNVs	n/a
44	rs536949396	chr6:26521534-26521535	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers	TF binding region Chromatin interactive region	33 gene(s)	Overlapped CNVs	n/a
45	rs144200722	chr6:26521547-26521548	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers	TF binding region Chromatin interactive region	33 gene(s)	Overlapped CNVs	n/a
46	rs189972032	chr6:26521559-26521560	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers	TF binding region Chromatin interactive region	33 gene(s)	Overlapped CNVs	n/a
47	rs541543918	chr6:26521573-26521574	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers	TF binding region Chromatin interactive region	33 gene(s)	Overlapped CNVs	n/a
48	rs570663941	chr6:26521587-26521588	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers	TF binding region Chromatin interactive region	33 gene(s)	Overlapped CNVs	n/a
49	rs6925703	chr6:26521589-26521590	Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers	TF binding region Chromatin interactive region	33 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
50	rs527298968	chr6:26521600-26521601	Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS ZNF genes & repeats Enhancers	TF binding region Chromatin interactive region	33 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:101)

Disease	PMID	Source
Acute lymphoblastic leukemia	22237106	CNVD
Follicular lymphoma	20505157	CNVD
Glioblastoma multiforme	21080181	CNVD
Ewing''s sarcoma	21437220	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Leukemia	21518781	CNVD
Cancer	21637783	CNVD
Facial dysmorphism	22105932	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Bladder cancer	19088036	CNVD
Wilms tumour	21544195	CNVD
Uveal melanoma	21693616	CNVD
Biliary cancer	19435499	CNVD
Malaria	21533027	CNVD
Retinoblastoma	19183342	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21858162	CNVD
Lung cancer	18438408	CNVD
Ewing''s sarcoma	17952124	CNVD
Gastric cancer	16891809	CNVD
Ovarian cancer	21781307	CNVD
Autism	21448237	CNVD
Cancer	20164919	CNVD
Melanoma	18172304	CNVD
Breast cancer	22844521	CNVD
HIV/AIDS	22844521	CNVD
Ovarian cancer	22844521	CNVD
Prostate cancer	22844521	CNVD
Psoriasis	22844521	CNVD
Rheumatoid arthritis	22844521	CNVD
Sclerosis systemic	22844521	CNVD
Systemic lupus erythematosus	22844521	CNVD
Breast cancer	22522925	CNVD
Breast cancer	21552322	CNVD
Immune disease	21076436	CNVD
Autoimmune disease	19135723	CNVD
Systemic lupus erythematosus	17953491	CNVD
Recurrent Infections	22737222	CNVD
Systemic lupus erythematosus	21904924	CNVD
Ependymoma	19289631	CNVD
Gestational infection	22844521	CNVD
Head circumference	22844521	CNVD
Infertility	22844521	CNVD
Recurrent birth weight diabetes	22844521	CNVD
Obesity	22844521	CNVD
Recurrent pregnancy loss	22844521	CNVD
Intellectual disability	21811512	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Congenital anomalies of the kidney and urinary tract	18694510	CNVD
Nasopharyngeal cancer	22815911	CNVD
Hepatocellular carcinoma	16750200	CNVD
Basal cell lymphoma	21115979	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Breast cancer	17133270	CNVD
Autism	22495311	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Cancer	16790693	CNVD
Breast cancer	22032731	CNVD
Cervical cancer	21062161	CNVD
Breast cancer	21785460	CNVD
Retinoblastoma	16790693	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Systemic lupus erythematosus	17503323	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
T-cell lymphomas	19863542	CNVD
Urothelial carcinoma	18382360	CNVD
Cancer	21183584	CNVD
small cell lung cancer	20016488	CNVD
Williams-beuren syndrome	16971481	CNVD
Renal cell carcinoma	18765545	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Gastric cancer	17908304	CNVD
Lung cancer	21569311	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	16397240	CNVD
Metanephric adenoma	20802469	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	21509527	CNVD
Breast cancer	21364760	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:408 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:26520400-26521000	Flanking Active TSS	HUES48 Cell Line	embryonic stem cell
2	chr6:26520400-26521000	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
3	chr6:26520400-26521000	Flanking Active TSS	Primary T cells from cord blood	blood
4	chr6:26520400-26521000	Flanking Active TSS	Primary T helper naive cells from peripheral blood	blood
5	chr6:26520400-26521000	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
6	chr6:26520400-26521000	Flanking Active TSS	Primary T helper memory cells from peripheral blood 1	blood
7	chr6:26520400-26521000	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
8	chr6:26520400-26521000	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
9	chr6:26520400-26521000	Flanking Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
10	chr6:26520400-26521000	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
11	chr6:26520400-26521000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
12	chr6:26520400-26521000	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
13	chr6:26520400-26521000	Flanking Active TSS	A549	lung
14	chr6:26520400-26521000	Flanking Active TSS	Dnd41	blood
15	chr6:26520400-26521000	Flanking Active TSS	GM12878-XiMat	blood
16	chr6:26520400-26521000	Flanking Active TSS	Hela-S3	cervix
17	chr6:26520400-26521000	Flanking Active TSS	HepG2	liver
18	chr6:26520400-26521000	Flanking Active TSS	HMEC	breast
19	chr6:26520400-26521000	Flanking Active TSS	K562	blood
20	chr6:26520400-26521000	Flanking Active TSS	NHEK	skin
21	chr6:26520400-26521000	Flanking Active TSS	Osteobl	bone
22	chr6:26520400-26521600	Active TSS	Liver	Liver
23	chr6:26520400-26522400	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
24	chr6:26520400-26522800	Active TSS	Brain Angular Gyrus	brain
25	chr6:26520400-26522800	Active TSS	Fetal Lung	lung
26	chr6:26520400-26522800	Active TSS	HSMMtube	muscle
27	chr6:26520400-26523000	Active TSS	ES-WA7 Cell Line	embryonic stem cell
28	chr6:26520400-26523000	Active TSS	Rectal Mucosa Donor 29	rectum
29	chr6:26520400-26523200	Active TSS	Breast Myoepithelial Primary Cells	Breast
30	chr6:26520600-26521000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
31	chr6:26520600-26521000	Flanking Active TSS	HUES6 Cell Line	embryonic stem cell
32	chr6:26520600-26521000	Flanking Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
33	chr6:26520600-26521000	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
34	chr6:26520600-26521000	Flanking Active TSS	Primary monocytes fromperipheralblood	blood
35	chr6:26520600-26521000	Flanking Active TSS	Primary B cells from cord blood	blood
36	chr6:26520600-26521000	Flanking Active TSS	Primary B cells from peripheral blood	blood
37	chr6:26520600-26521000	Flanking Active TSS	Primary T cells fromperipheralblood	blood
38	chr6:26520600-26521000	Flanking Active TSS	Primary hematopoietic stem cells	blood
39	chr6:26520600-26521000	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
40	chr6:26520600-26521000	Flanking Active TSS	Primary T helper memory cells from peripheral blood 2	blood
41	chr6:26520600-26521000	Flanking Active TSS	Primary T helper 17 cells PMA-I stimulated	--
42	chr6:26520600-26521000	Flanking Active TSS	Primary Natural Killer cells fromperipheralblood	blood
43	chr6:26520600-26521000	Flanking Active TSS	Primary T killer naive cells fromperipheralblood	blood
44	chr6:26520600-26521000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
45	chr6:26520600-26521000	Flanking Active TSS	Muscle Satellite Cultured Cells	--
46	chr6:26520600-26521000	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
47	chr6:26520600-26521000	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
48	chr6:26520600-26521000	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
49	chr6:26520600-26521000	Flanking Active TSS	Primary mononuclear cells fromperipheralblood	Blood
50	chr6:26520600-26521000	Flanking Active TSS	Adipose Nuclei	Adipose

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