No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs541964835 |
chr20:1446192-1446193 |
Weak transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers Strong transcription Flanking Active TSS Active TSS
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs551891313 |
chr20:1446228-1446229 |
Flanking Active TSS Weak transcription Enhancers Active TSS Genic enhancers Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs570476827 |
chr20:1446256-1446257 |
Flanking Active TSS Weak transcription Enhancers Active TSS Genic enhancers Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs534700723 |
chr20:1446260-1446261 |
Flanking Active TSS Weak transcription Enhancers Active TSS Genic enhancers Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs73891552 |
chr20:1446335-1446336 |
Flanking Active TSS Weak transcription Enhancers Active TSS Genic enhancers Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
4 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
6 |
rs568231178 |
chr20:1446401-1446402 |
Flanking Active TSS Enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs535659946 |
chr20:1446440-1446441 |
Flanking Active TSS Enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs557178291 |
chr20:1446456-1446457 |
Flanking Active TSS Enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs545607236 |
chr20:1446497-1446498 |
Flanking Active TSS Enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs193111977 |
chr20:1446541-1446542 |
Flanking Active TSS Enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs377496107 |
chr20:1446559-1446560 |
Flanking Active TSS Enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs959813 |
chr20:1446580-1446581 |
Flanking Active TSS Enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh
|
Chromatin interactive region
|
4 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
13 |
rs531127340 |
chr20:1446665-1446666 |
Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs74759040 |
chr20:1446667-1446668 |
Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs116832887 |
chr20:1446693-1446694 |
Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs563390735 |
chr20:1446708-1446709 |
Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs149596588 |
chr20:1446750-1446751 |
Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs144280190 |
chr20:1446782-1446783 |
Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs544488574 |
chr20:1446789-1446790 |
Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs563151023 |
chr20:1446797-1446798 |
Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs114639658 |
chr20:1446835-1446836 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs140053719 |
chr20:1446843-1446844 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs146551859 |
chr20:1446881-1446882 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs183553602 |
chr20:1446885-1446886 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs528113741 |
chr20:1446889-1446890 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs546681258 |
chr20:1446905-1446906 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs188289708 |
chr20:1446947-1446948 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs535596208 |
chr20:1446955-1446956 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs556873961 |
chr20:1446974-1446975 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs564018819 |
chr20:1446977-1446978 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs375610653 |
chr20:1446997-1446998 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs539336093 |
chr20:1447024-1447025 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
Chromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs558059448 |
chr20:1447081-1447082 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
Chromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs572875378 |
chr20:1447098-1447099 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
Chromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs540249019 |
chr20:1447107-1447108 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
Chromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs555401375 |
chr20:1447114-1447115 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
Chromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs573799768 |
chr20:1447120-1447121 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
Chromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs544742133 |
chr20:1447125-1447126 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
Chromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs530662605 |
chr20:1447157-1447158 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
Chromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs533611587 |
chr20:1447238-1447239 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
Chromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs545356646 |
chr20:1447274-1447275 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
Chromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs560780705 |
chr20:1447277-1447278 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
Chromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs528048970 |
chr20:1447344-1447345 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
Chromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs201950996 |
chr20:1447347-1447348 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
Chromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs568107056 |
chr20:1447358-1447359 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
Chromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs528971127 |
chr20:1447479-1447480 |
Active TSS Weak transcription Enhancers Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs550684410 |
chr20:1447516-1447517 |
Active TSS Weak transcription Enhancers Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs193187422 |
chr20:1447545-1447546 |
Active TSS Weak transcription Enhancers Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs368086398 |
chr20:1447552-1447553 |
Active TSS Weak transcription Enhancers Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs371973889 |
chr20:1447563-1447564 |
Active TSS Weak transcription Enhancers Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|