Variant report

Variant	esv3377463
Chromosome Location	chr3:20203472-20343029
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1205)
CpG islands
(count:1102)
Chromatin interactive
region (count:93)
LncRNA
region (count:12)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1205 , 50 per page) page: 1 2 3 4 5 6 7 ... 25

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr3:20227329-20228186	K562	blood:	n/a	n/a
2	ARID3A	chr3:20227487-20228388	HepG2	liver:	n/a	n/a
3	ARID3A	chr3:20267278-20267600	K562	blood:	n/a	n/a
4	ATF1	chr3:20226994-20228147	K562	blood:	n/a	n/a
5	ATF2	chr3:20288074-20288600	GM12878	blood:	n/a	n/a
6	ATF2	chr3:20288131-20288515	GM12878	blood:	n/a	n/a
7	ATF2	chr3:20227207-20228211	GM12878	blood:	n/a	n/a
8	ATF2	chr3:20227637-20228238	GM12878	blood:	n/a	n/a
9	ATF3	chr3:20227585-20227975	K562	blood:	n/a	n/a
10	ATF3	chr3:20227425-20228037	HepG2	liver:	n/a	n/a
11	ATF3	chr3:20227527-20228058	GM12878	blood:	n/a	n/a
12	ATF3	chr3:20227535-20227966	K562	blood:	n/a	n/a
13	ATF3	chr3:20227575-20227873	GM12878	blood:	n/a	n/a
14	ATF3	chr3:20227505-20227918	H1-hESC	embryonic stem cell:	n/a	n/a
15	ATF3	chr3:20227448-20228043	H1-hESC	embryonic stem cell:	n/a	n/a
16	ATF3	chr3:20227605-20227903	HepG2	liver:	n/a	n/a
17	BATF	chr3:20277379-20277647	GM12878	blood:	n/a	n/a
18	BATF	chr3:20277377-20277645	GM12878	blood:	n/a	n/a
19	BATF	chr3:20288158-20288422	GM12878	blood:	n/a	chr3:20288290-20288301
20	BATF	chr3:20288183-20288438	GM12878	blood:	n/a	chr3:20288290-20288301
21	BCL11A	chr3:20263779-20264109	H1-hESC	embryonic stem cell:	n/a	n/a
22	BCL11A	chr3:20288232-20288418	GM12878	blood:	n/a	n/a
23	BCL11A	chr3:20263785-20264058	H1-hESC	embryonic stem cell:	n/a	n/a
24	BCL11A	chr3:20288193-20288461	GM12878	blood:	n/a	n/a
25	BCL3	chr3:20227304-20227885	A549	lung:	n/a	n/a
26	BCLAF1	chr3:20227146-20228169	GM12878	blood:	n/a	n/a
27	BCLAF1	chr3:20227123-20228281	GM12878	blood:	n/a	n/a
28	BHLHE40	chr3:20227627-20227958	A549	lung:	n/a	n/a
29	BHLHE40	chr3:20226943-20228838	K562	blood:	n/a	n/a
30	BHLHE40	chr3:20227167-20228366	GM12878	blood:	n/a	n/a
31	BHLHE40	chr3:20306641-20306956	K562	blood:	n/a	n/a
32	BHLHE40	chr3:20227454-20228139	HepG2	liver:	n/a	n/a
33	BRCA1	chr3:20227654-20228038	HepG2	liver:	n/a	n/a
34	BRCA1	chr3:20227548-20228269	Hela-S3	cervix:	n/a	n/a
35	CBX3	chr3:20227437-20228131	K562	blood:	n/a	n/a
36	CBX3	chr3:20324264-20324647	K562	blood:	n/a	n/a
37	CBX3	chr3:20239197-20239673	HCT-116	colon:	n/a	n/a
38	CBX3	chr3:20226778-20228315	K562	blood:	n/a	n/a
39	CBX3	chr3:20324344-20324598	K562	blood:	n/a	n/a
40	CCNT2	chr3:20227443-20228238	K562	blood:	n/a	n/a
41	CEBPB	chr3:20339706-20339888	K562	blood:	n/a	n/a
42	CEBPB	chr3:20203224-20203542	A549	lung:	n/a	chr3:20203398-20203409
43	CEBPB	chr3:20207973-20208334	A549	lung:	n/a	chr3:20208153-20208164
44	CEBPB	chr3:20245427-20245594	K562	blood:	n/a	n/a
45	CEBPB	chr3:20245386-20245659	IMR90	lung:	n/a	n/a
46	CEBPB	chr3:20298924-20299012	K562	blood:	n/a	chr3:20298947-20298958
47	CEBPB	chr3:20208029-20208263	Hela-S3	cervix:	n/a	chr3:20208153-20208164
48	CEBPB	chr3:20325107-20325384	HepG2	liver:	n/a	chr3:20325251-20325264 chr3:20325252-20325263 chr3:20325116-20325127 chr3:20325251-20325262 chr3:20325251-20325264 chr3:20325251-20325264
49	CEBPB	chr3:20287304-20287598	MCF-7	breast:	n/a	n/a
50	CEBPB	chr3:20268370-20268487	K562	blood:	n/a	chr3:20268446-20268457

(count:1102 , 50 per page) page: 1 2 3 4 5 6 7 ... 23

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:20227789-20227839	BE2_C	brain:	n/a
2	chr3:20226994-20227044	GM12878	blood:	n/a
3	chr3:20227670-20227720	HEK293	kidney:	embryo
4	chr3:20228976-20229026	HMEC	breast:	n/a
5	chr3:20227789-20227839	BE2_C	brain:	n/a
6	chr3:20226994-20227044	GM12878	blood:	n/a
7	chr3:20227670-20227720	HEK293	kidney:	embryo
8	chr3:20228976-20229026	HMEC	breast:	n/a
9	chr3:20227940-20227990	NB4	blood:	n/a
10	chr3:20227809-20227859	HNPCEpiC	eye:	n/a
11	chr3:20226964-20227014	RPTEC	kidney:	n/a
12	chr3:20227809-20227859	U87	brain:	n/a
13	chr3:20227059-20227109	HIPEpiC	eye:	n/a
14	chr3:20227059-20227109	CMK	blood:	n/a
15	chr3:20226994-20227044	PFSK-1	brain:	n/a
16	chr3:20227663-20227713	PrEC	prostate:	n/a
17	chr3:20228976-20229026	AG04450	lung:	fetal
18	chr3:20227801-20227851	SK-N-MC	brain:	n/a
19	chr3:20228976-20229026	NHDF-neo	bronchial:	n/a
20	chr3:20231061-20231111	RPTEC	kidney:	n/a
21	chr3:20227091-20227141	NH-A	brain:	n/a
22	chr3:20226964-20227014	MCF-7	breast:	n/a
23	chr3:20227091-20227141	HIPEpiC	eye:	n/a
24	chr3:20223923-20223973	GM12892	blood:	n/a
25	chr3:20227822-20227872	NHDF-neo	bronchial:	n/a
26	chr3:20227397-20227447	BJ	skin:	n/a
27	chr3:20227397-20227447	LNCaP	prostate:	n/a
28	chr3:20231061-20231111	T-47D	breast:	n/a
29	chr3:20321584-20321634	NHDF-neo	bronchial:	n/a
30	chr3:20227397-20227447	SK-N-SH_RA	brain:	n/a
31	chr3:20227397-20227447	AG09319	gingival:	n/a
32	chr3:20227789-20227839	PANC-1	pancreas:	n/a
33	chr3:20227822-20227872	A549	lung:	n/a
34	chr3:20227809-20227859	T-47D	breast:	n/a
35	chr3:20227397-20227447	HUVEC	blood vessel:	n/a
36	chr3:20227801-20227851	PFSK-1	brain:	n/a
37	chr3:20227809-20227859	SK-N-SH_RA	brain:	n/a
38	chr3:20227925-20227975	AG10803	skin:	n/a
39	chr3:20227925-20227975	HIPEpiC	eye:	n/a
40	chr3:20227801-20227851	LNCaP	prostate:	n/a
41	chr3:20226964-20227014	SK-N-SH	brain:	n/a
42	chr3:20227059-20227109	HRPEpiC	eye:	n/a
43	chr3:20227822-20227872	SK-N-SH_RA	brain:	n/a
44	chr3:20227516-20227566	SK-N-SH	brain:	n/a
45	chr3:20227809-20227859	BE2_C	brain:	n/a
46	chr3:20231061-20231111	A549	lung:	n/a
47	chr3:20227091-20227141	HMEC	breast:	n/a
48	chr3:20231061-20231111	SK-N-SH_RA	brain:	n/a
49	chr3:20226964-20227014	BE2_C	brain:	n/a
50	chr3:20227940-20227990	GM12878	blood:	n/a

(count:93 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr3:20079527..20082964-chr3:20226742..20229620,4	K562	blood:
2	chr3:20231614..20234175-chr3:20236441..20238488,2	K562	blood:
3	chr3:20269133..20272394-chr3:20272728..20275710,3	K562	blood:
4	chr3:20193485..20196421-chr3:20205590..20208525,2	K562	blood:
5	chr3:20197490..20199260-chr3:20227955..20230018,2	K562	blood:
6	chr3:20202636..20204189-chr3:20204811..20206613,2	MCF-7	breast:
7	chr3:20219250..20222131-chr3:20228592..20230370,2	K562	blood:
8	chr3:20329415..20331770-chr3:20333391..20336112,2	K562	blood:
9	chr3:20248922..20251335-chr3:20323167..20325698,2	K562	blood:
10	chr3:20094893..20096727-chr3:20227964..20230863,2	MCF-7	breast:
11	chr3:20266881..20267830-chr3:21935770..21936618,4	MCF-7	breast:
12	chr3:19987690..19991206-chr3:20220694..20223940,3	MCF-7	breast:
13	chr3:20228018..20229588-chr3:20240700..20242261,2	K562	blood:
14	chr3:19986817..19988952-chr3:20217097..20219211,2	K562	blood:
15	chr3:20053872..20056558-chr3:20225792..20227888,2	K562	blood:
16	chr3:19987980..19990853-chr3:20225710..20227616,2	MCF-7	breast:
17	chr3:20213813..20216501-chr3:20227432..20229116,2	MCF-7	breast:
18	chr3:20227400..20228150-chr9:16726744..16727510,2	Hela-S3	cervix:
19	chr3:20079993..20081743-chr3:20205055..20207823,2	MCF-7	breast:
20	chr3:20080195..20082473-chr3:20238022..20239548,2	MCF-7	breast:
21	chr3:20201533..20203572-chr3:20204589..20206739,2	K562	blood:
22	chr3:20225377..20229978-chr3:20232761..20235716,5	K562	blood:
23	chr3:20227937..20230614-chr3:20238703..20240365,2	K562	blood:
24	chr3:20255206..20257186-chr3:20272224..20273896,2	K562	blood:
25	chr3:20225982..20227551-chr3:20349845..20352725,2	K562	blood:
26	chr3:20206092..20207782-chr3:20216460..20218892,2	K562	blood:
27	chr3:20080586..20082828-chr3:20216112..20219264,3	K562	blood:
28	chr3:20210669..20212300-chr3:20217697..20220649,2	K562	blood:
29	chr3:20215671..20219222-chr3:20225067..20228168,4	MCF-7	breast:
30	chr3:20227831..20229515-chr3:20229924..20231692,2	MCF-7	breast:
31	chr3:20211282..20213997-chr3:20225429..20228054,3	MCF-7	breast:
32	chr3:19991248..19993079-chr3:20225987..20227552,2	MCF-7	breast:
33	chr3:20195318..20197314-chr3:20202622..20204510,2	MCF-7	breast:
34	chr3:20342900..20345810-chr3:20347041..20349478,2	K562	blood:
35	chr3:20227937..20230614-chr3:20238703..20240365,2	K562	blood:
36	chr13:113841278..113842020-chr3:20226671..20227468,2	Hela-S3	cervix:
37	chr3:20208211..20212087-chr3:20224920..20227676,5	K562	blood:
38	chr3:20216479..20218064-chr3:20218704..20221260,2	K562	blood:
39	chr3:20316601..20319465-chr3:20319672..20321888,2	K562	blood:
40	chr3:20255206..20257186-chr3:20272224..20273896,2	K562	blood:
41	chr3:20320265..20323041-chr3:20324824..20326695,2	K562	blood:
42	chr3:20215671..20219222-chr3:20225067..20228168,4	MCF-7	breast:
43	chr3:20213813..20216501-chr3:20227432..20229116,2	MCF-7	breast:
44	chr3:20239141..20242093-chr3:20243237..20245367,3	K562	blood:
45	chr3:20212661..20217850-chr3:20224065..20229766,9	K562	blood:
46	chr3:20240283..20242142-chr3:20254913..20256935,2	K562	blood:
47	chr2:97426251..97427245-chr3:20227662..20228331,2	Hela-S3	cervix:
48	chr3:20079693..20081472-chr3:20203928..20206383,2	K562	blood:
49	chr3:19987439..19992261-chr3:20226257..20229350,4	K562	blood:
50	chr3:20333199..20337962-chr3:20339317..20343120,4	K562	blood:

(count:12 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-KAT2B-1	chr3:20215778-20216017	ENSG00000237485.1
2	lnc-KAT2B-6	chr3:20286533-20287951	NONHSAT088619
3	lnc-KAT2B-5	chr3:20210846-20210905	l_2328_chr3:20202875-20210905_testes
4	lnc-KAT2B-1	chr3:20215736-20216017	ENSG00000237485.1
5	lnc-KAT2B-1	chr3:20216227-20216310	ENSG00000237485.1
6	lnc-KAT2B-1	chr3:20218709-20218742	ENSG00000237485.1
7	lnc-PP2D1-2	chr3:20211553-20212307	NONHSAT088614
8	lnc-KAT2B-1	chr3:20227467-20227607	ENSG00000237485.1
9	lnc-KAT2B-1	chr3:20227726-20230848	NONHSAT088617
10	lnc-PP2D1-2	chr3:20212535-20212759	NONHSAT088614
11	lnc-KAT2B-1	chr3:20216227-20216310	ENSG00000237485.1
12	lnc-KAT2B-1	chr3:20227467-20227919	ENSG00000237485.1

No data

Variant related genes	Relation type
RNU6-822P	TF binding region
RNY4P22	TF binding region
SGOL1-AS1	TF binding region
SGOL1	TF binding region
RNU6-822P	CpG island
RNY4P22	CpG island
SGOL1-AS1	CpG island
SGOL1	CpG island
ENSG00000237485	chromatin interactions
ENSG00000229468	chromatin interactions
ENSG00000234779	chromatin interactions
ENSG00000117625	chromatin interactions
ENSG00000103978	chromatin interactions
ENSG00000252442	chromatin interactions
ENSG00000158158	chromatin interactions
ENSG00000144566	chromatin interactions
ENSG00000163576	chromatin interactions
ENSG00000214013	chromatin interactions
ENSG00000126226	chromatin interactions
ENSG00000129810	chromatin interactions
ENSG00000201699	chromatin interactions
ENSG00000114166	chromatin interactions

Extended variants
information (count: 5074 )
Associated
traits (count: 76 )

Variant overlapped rSNPs/rCNVs (count:5074 , 50 per page) page: 1 2 3 4 5 6 7 ... 102

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs546910052	chr3:20203504-20203505	Strong transcription Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs375434649	chr3:20203575-20203576	Strong transcription Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs2174843	chr3:20203579-20203580	Strong transcription Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs568142066	chr3:20203608-20203609	Strong transcription Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs557603932	chr3:20203645-20203646	Strong transcription Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs557167583	chr3:20203661-20203662	Strong transcription Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs78242467	chr3:20203666-20203667	Strong transcription Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs73193239	chr3:20203711-20203712	Strong transcription Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
9	rs115735762	chr3:20203726-20203727	Strong transcription Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs35323691	chr3:20203739-20203740	Strong transcription Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs553675260	chr3:20203877-20203878	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs572936490	chr3:20203884-20203885	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs540503310	chr3:20203888-20203889	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs556071127	chr3:20203955-20203956	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs76348655	chr3:20203962-20203963	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs137910936	chr3:20203975-20203976	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs142374575	chr3:20203985-20203986	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs183092373	chr3:20204013-20204014	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs530591008	chr3:20204079-20204080	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs545933771	chr3:20204112-20204113	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs187944631	chr3:20204163-20204164	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs144953871	chr3:20204212-20204213	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs139548512	chr3:20204266-20204267	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs74840824	chr3:20204269-20204270	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs544888308	chr3:20204293-20204294	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs77228355	chr3:20204303-20204304	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs77405036	chr3:20204304-20204305	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs546577155	chr3:20204331-20204332	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs568385628	chr3:20204406-20204407	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs76606324	chr3:20204505-20204506	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs545736004	chr3:20204522-20204523	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs183743611	chr3:20204569-20204570	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs73037144	chr3:20204681-20204682	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs34719325	chr3:20204695-20204696	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs192862045	chr3:20204755-20204756	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs7620006	chr3:20204781-20204782	Weak transcription Strong transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
37	rs143008817	chr3:20204814-20204815	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs184849831	chr3:20204864-20204865	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs4858771	chr3:20204871-20204872	Weak transcription Strong transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
40	rs374472200	chr3:20204874-20204875	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs115111114	chr3:20204876-20204877	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs190086723	chr3:20204881-20204882	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs548017532	chr3:20204912-20204913	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs9852109	chr3:20204976-20204977	Weak transcription Strong transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs369636844	chr3:20204997-20204998	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs572868843	chr3:20205141-20205142	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs78616583	chr3:20205149-20205150	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs77792579	chr3:20205150-20205151	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs112570446	chr3:20205161-20205162	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs181615184	chr3:20205174-20205175	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:76)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	17603634	CNVD
Neuroblastoma	17327916	CNVD
Glioblastoma multiforme	21080181	CNVD
Neuroblastoma	18923191	CNVD
Colorectal cancer	21297112	CNVD
Lynch syndrome	18415027	CNVD
Renal cell carcinoma	18592004	CNVD
Acute myeloid leukemia	20729466	CNVD
Urothelial carcinoma	18382360	CNVD
Melanoma	18172304	CNVD
Cervical cancer	21062161	CNVD
Hirschsprung''s Disease	21712996	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Insulin resistance	16721378	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	21484798	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Oral cancer	19627613	CNVD
Renal cell carcinoma	19461508	CNVD
Epithelial cancer	22065749	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Acute myeloid leukemia	16864856	CNVD
Liposarcoma	21253554	CNVD
Basal cell lymphoma	21115979	CNVD
Endometrial cancer	22040021	CNVD
Pancreatic endocrine tumor	20981439	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Oral cancer	21386901	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Retinoblastoma	21504564	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
lymphocytic leukemia	21291569	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Renal cell carcinoma	21668985	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Intellectual disability	22102821	CNVD
Esophageal cancer	20955586	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Myelofibrosis	22110671	CNVD
Gastric adenocarcinoma	19115996	CNVD
Squamous cell cancer	20885788	CNVD
Esophageal squamous carcinoma	17470683	CNVD
Breast cancer	17133270	CNVD
Developmental delay	21147756	CNVD
Uveal melanoma	20484589	CNVD
Autism	22495311	CNVD
Congenital anomalies of the kidney and urinary tract	18316590	CNVD
Cancer	20164919	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:996 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:20141200-20222400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr3:20164400-20204400	Weak transcription	Small Intestine	intestine
3	chr3:20164800-20211400	Weak transcription	Placenta Amnion	Placenta Amnion
4	chr3:20167800-20226000	Weak transcription	Muscle Satellite Cultured Cells	--
5	chr3:20184600-20220200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr3:20188400-20204800	Weak transcription	Fetal Brain Female	brain
7	chr3:20188400-20212400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
8	chr3:20190600-20220200	Weak transcription	Fetal Muscle Leg	muscle
9	chr3:20192800-20220600	Weak transcription	Fetal Lung	lung
10	chr3:20193200-20204000	Strong transcription	Fetal Thymus	thymus
11	chr3:20193800-20226600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
12	chr3:20194000-20220400	Weak transcription	NH-A	brain
13	chr3:20194200-20205400	Strong transcription	Dnd41	blood
14	chr3:20194800-20215200	Weak transcription	HepG2	liver
15	chr3:20195000-20212400	Weak transcription	H9 Cell Line	embryonic stem cell
16	chr3:20195000-20226000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
17	chr3:20195200-20203800	Strong transcription	HUES6 Cell Line	embryonic stem cell
18	chr3:20195200-20221800	Weak transcription	NHEK	skin
19	chr3:20195400-20226000	Weak transcription	NHDF-Ad	bronchial
20	chr3:20195400-20226200	Weak transcription	NHLF	lung
21	chr3:20195600-20212000	Weak transcription	Primary neutrophils fromperipheralblood	blood
22	chr3:20196400-20204000	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
23	chr3:20196400-20225600	Strong transcription	HUES64 Cell Line	embryonic stem cell
24	chr3:20196800-20221600	Weak transcription	Fetal Intestine Small	intestine
25	chr3:20197000-20226200	Weak transcription	Rectal Mucosa Donor 29	rectum
26	chr3:20197000-20226800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
27	chr3:20197400-20227000	Weak transcription	Sigmoid Colon	Sigmoid Colon
28	chr3:20197600-20226800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
29	chr3:20198000-20203600	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
30	chr3:20198200-20219800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
31	chr3:20198400-20204200	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
32	chr3:20198600-20220200	Weak transcription	Thymus	Thymus
33	chr3:20199000-20203800	Strong transcription	iPS-20b Cell Line	embryonic stem cell
34	chr3:20199400-20206000	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
35	chr3:20199400-20225400	Strong transcription	iPS-18 Cell Line	embryonic stem cell
36	chr3:20199600-20204000	Strong transcription	H1 Cell Line	embryonic stem cell
37	chr3:20199600-20204000	Strong transcription	A549	lung
38	chr3:20199600-20204000	Strong transcription	K562	blood
39	chr3:20199600-20221000	Weak transcription	Fetal Stomach	stomach
40	chr3:20199600-20225400	Strong transcription	HUES48 Cell Line	embryonic stem cell
41	chr3:20200000-20225800	Weak transcription	Osteobl	bone
42	chr3:20200200-20204000	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
43	chr3:20200800-20203800	Strong transcription	ES-I3 Cell Line	embryonic stem cell
44	chr3:20201400-20203800	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
45	chr3:20201600-20206600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
46	chr3:20201600-20209800	Weak transcription	HSMM	muscle
47	chr3:20201800-20220000	Weak transcription	Fetal Muscle Trunk	muscle
48	chr3:20201800-20225800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
49	chr3:20202000-20207400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
50	chr3:20202000-20209400	Weak transcription	Hela-S3	cervix

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