Variant report

Variant	esv3377721
Chromosome Location	chr4:48342220-48345068
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:767)
CpG islands
(count:427)
Chromatin interactive
region (count:19)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:767 , 50 per page) page: 1 2 3 4 5 6 7 ... 16

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr4:48342653-48343056	K562	blood:	n/a	n/a
2	ARID3A	chr4:48343525-48343629	HepG2	liver:	n/a	n/a
3	ARID3A	chr4:48342472-48343316	HepG2	liver:	n/a	n/a
4	ATF1	chr4:48342502-48343650	K562	blood:	n/a	n/a
5	ATF2	chr4:48342661-48343686	GM12878	blood:	n/a	n/a
6	ATF3	chr4:48343344-48343658	K562	blood:	n/a	chr4:48343388-48343397 chr4:48343456-48343469
7	BACH1	chr4:48342887-48343268	K562	blood:	n/a	n/a
8	BACH1	chr4:48342984-48343320	H1-hESC	embryonic stem cell:	n/a	n/a
9	BCL3	chr4:48342973-48343748	GM12878	blood:	n/a	chr4:48343238-48343251 chr4:48343422-48343435 chr4:48343388-48343401
10	BCLAF1	chr4:48342804-48343849	GM12878	blood:	n/a	chr4:48343238-48343251 chr4:48343422-48343435 chr4:48343388-48343401
11	BCLAF1	chr4:48342710-48343749	GM12878	blood:	n/a	chr4:48343238-48343251 chr4:48343422-48343435 chr4:48343388-48343401
12	BHLHE40	chr4:48342757-48343684	GM12878	blood:	n/a	chr4:48343422-48343438 chr4:48343391-48343407 chr4:48343576-48343592 chr4:48343424-48343440
13	BHLHE40	chr4:48344080-48344425	K562	blood:	n/a	chr4:48344157-48344173
14	BHLHE40	chr4:48342276-48343675	K562	blood:	n/a	chr4:48343422-48343438 chr4:48343391-48343407 chr4:48343576-48343592 chr4:48343424-48343440
15	BRCA1	chr4:48343450-48343605	Hela-S3	cervix:	n/a	n/a
16	BRCA1	chr4:48343116-48343215	HepG2	liver:	n/a	n/a
17	BRCA1	chr4:48343030-48343239	GM12878	blood:	n/a	n/a
18	CBX3	chr4:48342466-48343748	K562	blood:	n/a	n/a
19	CBX3	chr4:48343969-48344510	K562	blood:	n/a	n/a
20	CCNT2	chr4:48342956-48344299	K562	blood:	n/a	chr4:48343342-48343351
21	CEBPB	chr4:48343128-48343603	H1-hESC	embryonic stem cell:	n/a	n/a
22	CEBPB	chr4:48342729-48343698	Hela-S3	cervix:	n/a	n/a
23	CEBPD	chr4:48342938-48343358	K562	blood:	n/a	n/a
24	CEBPD	chr4:48342933-48343772	HepG2	liver:	n/a	n/a
25	CHD1	chr4:48342435-48343269	GM12878	blood:	n/a	n/a
26	CHD1	chr4:48342148-48345930	IMR90	lung:	n/a	n/a
27	CHD1	chr4:48343574-48344070	H1-hESC	embryonic stem cell:	n/a	n/a
28	CHD1	chr4:48344330-48344481	GM12878	blood:	n/a	n/a
29	CHD2	chr4:48344278-48344314	HepG2	liver:	n/a	n/a
30	CHD2	chr4:48342981-48343738	HepG2	liver:	n/a	n/a
31	CHD2	chr4:48342924-48344044	GM12878	blood:	n/a	n/a
32	CHD2	chr4:48343529-48343776	H1-hESC	embryonic stem cell:	n/a	n/a
33	CHD2	chr4:48342723-48343714	K562	blood:	n/a	n/a
34	CHD2	chr4:48342905-48344116	Hela-S3	cervix:	n/a	n/a
35	CREB1	chr4:48342740-48343853	K562	blood:	n/a	n/a
36	CREB1	chr4:48343056-48343752	HepG2	liver:	n/a	n/a
37	CREB1	chr4:48342927-48343758	K562	blood:	n/a	n/a
38	CREB1	chr4:48343310-48343480	A549	lung:	n/a	n/a
39	CREB1	chr4:48343234-48343715	ECC-1	luminal epithelium:	n/a	n/a
40	CREB1	chr4:48343058-48343753	H1-hESC	embryonic stem cell:	n/a	n/a
41	CREB1	chr4:48343041-48343802	H1-hESC	embryonic stem cell:	n/a	n/a
42	CREB1	chr4:48342930-48343868	GM12878	blood:	n/a	n/a
43	CREB1	chr4:48342998-48343720	A549	lung:	n/a	n/a
44	CREB1	chr4:48342847-48344434	HepG2	liver:	n/a	n/a
45	CTBP2	chr4:48343010-48344312	H1-hESC	embryonic stem cell:	n/a	n/a
46	CTCF	chr4:48343600-48343750	HCT-116	colon:	n/a	n/a
47	CTCF	chr4:48343540-48343690	AG10803	skin:	n/a	n/a
48	CTCF	chr4:48343980-48344130	GM12878	blood:	n/a	n/a
49	CTCF	chr4:48343560-48343710	GM12865	blood:	n/a	n/a
50	CTCF	chr4:48343540-48343690	HMF	breast:	n/a	n/a

(count:427 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr4:48342263-48342313	NH-A	brain:	n/a
2	chr4:48343090-48343140	BE2_C	brain:	n/a
3	chr4:48343623-48343673	HRPEpiC	eye:	n/a
4	chr4:48344328-48344378	NHDF-neo	bronchial:	n/a
5	chr4:48343649-48343699	LNCaP	prostate:	n/a
6	chr4:48344328-48344378	IMR90	lung:	fetal
7	chr4:48343649-48343699	IMR90	lung:	fetal
8	chr4:48344328-48344378	ovcar-3	ovarian:	n/a
9	chr4:48343649-48343699	NH-A	brain:	n/a
10	chr4:48344328-48344378	U87	brain:	n/a
11	chr4:48344328-48344378	BJ	skin:	n/a
12	chr4:48344328-48344378	HCF	heart:	n/a
13	chr4:48343623-48343673	HIPEpiC	eye:	n/a
14	chr4:48342263-48342313	HepG2	liver:	n/a
15	chr4:48343090-48343140	Hela-S3	cervix:	n/a
16	chr4:48342263-48342313	Caco-2	colon:	n/a
17	chr4:48343649-48343699	SK-N-SH_RA	brain:	n/a
18	chr4:48344328-48344378	NHBE	bronchial:	n/a
19	chr4:48343623-48343673	HCF	heart:	n/a
20	chr4:48342263-48342313	HUVEC	blood vessel:	n/a
21	chr4:48344328-48344378	SK-N-SH	brain:	n/a
22	chr4:48344328-48344378	Hela-S3	cervix:	n/a
23	chr4:48343649-48343699	HRE	kidney:	n/a
24	chr4:48342263-48342313	GM12891	blood:	n/a
25	chr4:48343649-48343699	Jurkat	blood:	n/a
26	chr4:48343333-48343383	SK-N-MC	brain:	n/a
27	chr4:48343333-48343383	NB4	blood:	n/a
28	chr4:48343250-48343300	LNCaP	prostate:	n/a
29	chr4:48343649-48343699	T-47D	breast:	n/a
30	chr4:48343623-48343673	PrEC	prostate:	n/a
31	chr4:48342263-48342313	HRPEpiC	eye:	n/a
32	chr4:48344328-48344378	Hepatocyte	liver:	n/a
33	chr4:48343333-48343383	MCF10A-Er-Src	breast:	n/a
34	chr4:48343090-48343140	PFSK-1	brain:	n/a
35	chr4:48342263-48342313	H1-hESC	embryonic stem cell:	embryo
36	chr4:48343333-48343383	HMEC	breast:	n/a
37	chr4:48343623-48343673	HPAEpiC	pulmonary alveolar:	n/a
38	chr4:48343333-48343383	HRCEpiC	kidney:	n/a
39	chr4:48344328-48344378	PrEC	prostate:	n/a
40	chr4:48344328-48344378	HAEpiC	amniotic membrane:	n/a
41	chr4:48343649-48343699	A549	lung:	n/a
42	chr4:48343250-48343300	PANC-1	pancreas:	n/a
43	chr4:48343250-48343300	HMEC	breast:	n/a
44	chr4:48343649-48343699	CMK	blood:	n/a
45	chr4:48343623-48343673	HCPEpiC	choroid plexus:	n/a
46	chr4:48343649-48343699	HMEC	breast:	n/a
47	chr4:48343649-48343699	SAEC	small airway:	n/a
48	chr4:48343333-48343383	NHDF-neo	bronchial:	n/a
49	chr4:48342263-48342313	AG04449	skin:	fetal
50	chr4:48343649-48343699	AG04449	skin:	fetal

(count:19 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr4:48309394..48311856-chr4:48341157..48342687,2	K562	blood:
2	chr4:48270141..48273598-chr4:48341900..48344865,7	K562	blood:
3	chr4:48343471..48345353-chr4:48369021..48370568,2	MCF-7	breast:
4	chr4:48342222..48343122-chr6:10417159..10417982,2	Hela-S3	cervix:
5	chr4:48321470..48323955-chr4:48341055..48342680,2	K562	blood:
6	chr4:48341290..48343185-chr4:52708590..52710145,2	K562	blood:
7	chr4:48269261..48273807-chr4:48342628..48344865,6	K562	blood:
8	chr4:48343973..48346063-chr4:48356828..48359174,2	K562	blood:
9	chr4:48344085..48345850-chr4:48830456..48833422,2	K562	blood:
10	chr4:48341515..48344236-chr4:48506268..48509029,2	K562	blood:
11	chr2:96873883..96874519-chr4:48342610..48343559,2	NB4	blood:
12	chr4:48339667..48343042-chr4:48377720..48381453,4	K562	blood:
13	chr4:48270358..48273390-chr4:48340605..48344777,4	MCF-7	breast:
14	chr4:48341909..48343469-chr4:48483589..48486077,2	K562	blood:
15	chr4:48312456..48314197-chr4:48341222..48342911,2	K562	blood:
16	chr4:48341542..48343650-chr4:48378558..48381453,2	K562	blood:
17	chr17:79479311..79479820-chr4:48342792..48343547,2	Hela-S3	cervix:
18	chr3:42641898..42642685-chr4:48342789..48343555,2	Hela-S3	cervix:
19	chr4:48343572..48346544-chr4:48354204..48356298,2	K562	blood:

No data

Variant related genes	Relation type
SLAIN2	TF binding region
SLAIN2	CpG island
ENSG00000084090	chromatin interactions
ENSG00000093183	chromatin interactions
ENSG00000075539	chromatin interactions
ENSG00000145248	chromatin interactions
ENSG00000135605	chromatin interactions
ENSG00000137203	chromatin interactions
ENSG00000109184	chromatin interactions
ENSG00000109180	chromatin interactions
ENSG00000204685	chromatin interactions
ENSG00000184009	chromatin interactions
ENSG00000109171	chromatin interactions
ENSG00000114857	chromatin interactions

Extended variants
information (count: 119 )
Associated
traits (count: 63 )

Variant overlapped rSNPs/rCNVs (count:119 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs538499575	chr4:48342225-48342226	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
2	rs538351935	chr4:48342245-48342246	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
3	rs568515373	chr4:48342263-48342264	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region CpG island Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
4	rs535822579	chr4:48342264-48342265	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region CpG island Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
5	rs554009537	chr4:48342266-48342267	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region CpG island Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
6	rs148639469	chr4:48342283-48342284	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region CpG island Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
7	rs539279403	chr4:48342289-48342290	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region CpG island Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
8	rs184604240	chr4:48342352-48342353	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
9	rs79253427	chr4:48342361-48342362	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
10	rs374413807	chr4:48342369-48342370	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
11	rs200066160	chr4:48342372-48342373	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
12	rs575821134	chr4:48342399-48342400	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
13	rs112028616	chr4:48342436-48342437	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
14	rs561625630	chr4:48342440-48342441	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
15	rs573334007	chr4:48342459-48342460	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
16	rs532183909	chr4:48342512-48342513	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
17	rs376879340	chr4:48342525-48342526	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
18	rs13129953	chr4:48342531-48342532	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
19	rs532996591	chr4:48342558-48342559	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
20	rs552506707	chr4:48342589-48342590	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
21	rs564711520	chr4:48342674-48342675	Active TSS Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
22	rs56089943	chr4:48342682-48342683	Active TSS Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	9 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
23	rs151167690	chr4:48342685-48342686	Active TSS Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
24	rs568756457	chr4:48342706-48342707	Active TSS Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
25	rs535499864	chr4:48342730-48342731	Active TSS Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
26	rs187792954	chr4:48342813-48342814	Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
27	rs192533403	chr4:48342822-48342823	Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
28	rs536562019	chr4:48342825-48342826	Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
29	rs539960454	chr4:48342849-48342850	Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
30	rs184287972	chr4:48342899-48342900	Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
31	rs371724415	chr4:48342928-48342929	Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
32	rs11731199	chr4:48342943-48342944	Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	12 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs558333704	chr4:48342948-48342949	Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
34	rs536832916	chr4:48342963-48342964	Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
35	rs368667654	chr4:48343006-48343007	Active TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
36	rs66671150	chr4:48343043-48343044	Active TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	12 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
37	rs556580902	chr4:48343116-48343117	Active TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
38	rs534013868	chr4:48343118-48343119	Active TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
39	rs573852213	chr4:48343152-48343153	Active TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
40	rs540673317	chr4:48343167-48343168	Active TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
41	rs140260305	chr4:48343180-48343181	Active TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
42	rs145216378	chr4:48343181-48343182	Active TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
43	rs375393345	chr4:48343287-48343288	Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
44	rs369942694	chr4:48343318-48343319	Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
45	rs563351911	chr4:48343372-48343373	Active TSS Transcr. at gene 5' and 3' Weak transcription	Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
46	rs367972533	chr4:48343388-48343389	Active TSS Transcr. at gene 5' and 3' Weak transcription	Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
47	rs531978881	chr4:48343420-48343421	Active TSS Transcr. at gene 5' and 3' Weak transcription	Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
48	rs544000653	chr4:48343443-48343444	Active TSS Transcr. at gene 5' and 3' Weak transcription	Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
49	rs562391854	chr4:48343449-48343450	Active TSS Transcr. at gene 5' and 3' Weak transcription	Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
50	rs529547232	chr4:48343452-48343453	Active TSS Transcr. at gene 5' and 3' Weak transcription	Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:63)

Disease	PMID	Source
Colorectal cancer	19359472	CNVD
Neuroblastoma	17533364	CNVD
Oral squamous cell carcinoma	17134496	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Cancer	21637783	CNVD
Melanoma	21693616	CNVD
Squamous cell cancer	21044232	CNVD
Colorectal cancer	20709793	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Non-small cell lung cancer	21044232	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	17387387	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Cervical cancer	21062161	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Glioblastoma multiforme	21080181	CNVD
Chordoma	21602918	CNVD
HIV/AIDS	22032296	CNVD
Medulloblastoma	21979893	CNVD
Neuroblastoma	18923191	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	21858162	CNVD
small cell lung cancer	20016488	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Gastric cancer	21586687	CNVD
lymphocytic leukemia	21291569	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21829676	CNVD
Melanoma	22183965	CNVD
Cancer	22183965	CNVD
Melanoma	18172304	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Lung cancer	18438408	CNVD
Renal cell carcinoma	18194544	CNVD
Breast cancer	17603634	CNVD
Glioblastoma multiforme	21922591	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Parkinson disease	21956041	CNVD
Mental retardation	20522426	CNVD
delayed speech	20522426	CNVD
growth disorder	20522426	CNVD
Hepatocellular carcinoma	16750200	CNVD
Myxofibrosarcoma	16751306	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Acute myeloid leukemia	20729466	CNVD
Myelofibrosis	22110671	CNVD
Hirschsprung''s Disease	21712996	CNVD
Basal cell lymphoma	21115979	CNVD
Breast cancer	22522925	CNVD
Parkinson disease	18923514	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Cancer	21183584	CNVD
Renal cell carcinoma	20952505	CNVD

Chromatin state (count:379 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:48330000-48342400	Weak transcription	Esophagus	oesophagus
2	chr4:48333000-48342400	Weak transcription	Left Ventricle	heart
3	chr4:48334200-48342600	Weak transcription	Sigmoid Colon	Sigmoid Colon
4	chr4:48334400-48342400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr4:48337600-48342400	Weak transcription	Skeletal Muscle Male	skeletal muscle
6	chr4:48339400-48342400	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
7	chr4:48340400-48342400	Weak transcription	Fetal Muscle Trunk	muscle
8	chr4:48340800-48342400	Weak transcription	Placenta Amnion	Placenta Amnion
9	chr4:48341000-48342400	Weak transcription	Psoas Muscle	Psoas
10	chr4:48341200-48342400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
11	chr4:48341200-48342400	Weak transcription	Fetal Thymus	thymus
12	chr4:48341400-48342600	Flanking Active TSS	K562	blood
13	chr4:48341600-48342400	Enhancers	Cortex derived primary cultured neurospheres	brain
14	chr4:48341600-48342600	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
15	chr4:48341600-48342600	Flanking Active TSS	Rectal Mucosa Donor 31	rectum
16	chr4:48341800-48342400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
17	chr4:48341800-48342400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
18	chr4:48341800-48342600	Flanking Active TSS	NHLF	lung
19	chr4:48342000-48342400	Flanking Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
20	chr4:48342000-48342400	Flanking Active TSS	HUES48 Cell Line	embryonic stem cell
21	chr4:48342000-48342400	Flanking Active TSS	HUES6 Cell Line	embryonic stem cell
22	chr4:48342000-48342400	Flanking Active TSS	iPS-15b Cell Line	embryonic stem cell
23	chr4:48342000-48342400	Flanking Active TSS	iPS-20b Cell Line	embryonic stem cell
24	chr4:48342000-48342400	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
25	chr4:48342000-48342600	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
26	chr4:48342000-48342600	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
27	chr4:48342000-48342600	Flanking Active TSS	Duodenum Mucosa	Duodenum
28	chr4:48342000-48342600	Flanking Active TSS	Fetal Heart	heart
29	chr4:48342000-48342600	Flanking Active TSS	NHDF-Ad	bronchial
30	chr4:48342000-48342800	Flanking Active TSS	iPS-18 Cell Line	embryonic stem cell
31	chr4:48342000-48342800	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
32	chr4:48342000-48343000	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
33	chr4:48342000-48343000	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
34	chr4:48342000-48345400	Active TSS	ES-I3 Cell Line	embryonic stem cell
35	chr4:48342000-48345400	Active TSS	Fetal Intestine Large	intestine
36	chr4:48342000-48345600	Active TSS	Fetal Intestine Small	intestine
37	chr4:48342200-48342400	Enhancers	Primary monocytes fromperipheralblood	blood
38	chr4:48342200-48342400	Enhancers	Primary neutrophils fromperipheralblood	blood
39	chr4:48342200-48342400	Enhancers	Primary B cells from cord blood	blood
40	chr4:48342200-48342400	Enhancers	Primary B cells from peripheral blood	blood
41	chr4:48342200-48342400	Enhancers	Primary T cells from cord blood	blood
42	chr4:48342200-48342400	Enhancers	Primary T helper naive cells from peripheral blood	blood
43	chr4:48342200-48342400	Enhancers	Primary T helper naive cells fromperipheralblood	blood
44	chr4:48342200-48342400	Enhancers	Primary T helper cells fromperipheralblood	blood
45	chr4:48342200-48342400	Enhancers	Primary T killer naive cells fromperipheralblood	blood
46	chr4:48342200-48342400	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
47	chr4:48342200-48342400	Enhancers	Brain Germinal Matrix	brain
48	chr4:48342200-48342400	Enhancers	Brain Inferior Temporal Lobe	brain
49	chr4:48342200-48342400	Enhancers	Brain Substantia Nigra	brain
50	chr4:48342200-48342400	Enhancers	Colon Smooth Muscle	Colon

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