No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs532465043 |
chr3:23846396-23846397 |
Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Active TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs534710965 |
chr3:23846495-23846496 |
Weak transcription Enhancers Bivalent Enhancer Active TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs115814373 |
chr3:23846549-23846550 |
Weak transcription Enhancers Bivalent Enhancer Active TSS
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs554521909 |
chr3:23846551-23846552 |
Weak transcription Enhancers Bivalent Enhancer Active TSS
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs565693834 |
chr3:23846624-23846625 |
Weak transcription Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs73148287 |
chr3:23846679-23846680 |
Weak transcription Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
7 |
rs554706663 |
chr3:23846692-23846693 |
Weak transcription Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs569725070 |
chr3:23846703-23846704 |
Weak transcription Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs536736250 |
chr3:23846715-23846716 |
Weak transcription Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs3762768 |
chr3:23846724-23846725 |
Weak transcription Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs145242772 |
chr3:23846740-23846741 |
Weak transcription Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs556748157 |
chr3:23846893-23846894 |
Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs578100638 |
chr3:23846939-23846940 |
Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs17013751 |
chr3:23846940-23846941 |
Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs181533347 |
chr3:23847003-23847004 |
Active TSS Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs374356146 |
chr3:23847081-23847082 |
Active TSS Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs572112168 |
chr3:23847100-23847101 |
Active TSS Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs557366452 |
chr3:23847119-23847120 |
Active TSS Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs3762767 |
chr3:23847211-23847212 |
Active TSS Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
20 |
rs545948688 |
chr3:23847223-23847224 |
Active TSS Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs543529408 |
chr3:23847233-23847234 |
Active TSS Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs374912841 |
chr3:23847300-23847301 |
Active TSS Flanking Active TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs565122049 |
chr3:23847312-23847313 |
Active TSS Flanking Active TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs567768679 |
chr3:23847373-23847374 |
Active TSS Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs368219911 |
chr3:23847374-23847375 |
Active TSS Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs532172314 |
chr3:23847393-23847394 |
Active TSS Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs547690251 |
chr3:23847495-23847496 |
Active TSS Weak transcription Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs7646772 |
chr3:23847670-23847671 |
Active TSS Weak transcription Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs529721842 |
chr3:23847709-23847710 |
Active TSS Weak transcription Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs111481071 |
chr3:23847849-23847850 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs569662435 |
chr3:23847852-23847853 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs537187155 |
chr3:23847857-23847858 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs558337065 |
chr3:23847930-23847931 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs571835829 |
chr3:23847968-23847969 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs538811625 |
chr3:23848073-23848074 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs554055116 |
chr3:23848154-23848155 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs572448077 |
chr3:23848280-23848281 |
Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs542911394 |
chr3:23848291-23848292 |
Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs72625887 |
chr3:23848336-23848337 |
Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
40 |
rs576342260 |
chr3:23848359-23848360 |
Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs543912040 |
chr3:23848416-23848417 |
Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs565204868 |
chr3:23848418-23848419 |
Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs367722984 |
chr3:23848457-23848458 |
Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs576969080 |
chr3:23848476-23848477 |
Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs191488086 |
chr3:23848512-23848513 |
Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs151264152 |
chr3:23848523-23848524 |
Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs530060259 |
chr3:23848530-23848531 |
Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs548490620 |
chr3:23848567-23848568 |
Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs563290643 |
chr3:23848569-23848570 |
Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs76464485 |
chr3:23848584-23848585 |
Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|