No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs534587581 |
chr2:114646846-114646847 |
Active TSS Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive regionlncRNA
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs7605071 |
chr2:114646847-114646848 |
Active TSS Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive regionlncRNA
|
6 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
3 |
rs567343220 |
chr2:114647001-114647002 |
Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive regionlncRNA
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs536206288 |
chr2:114647007-114647008 |
Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive regionlncRNA
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs149965217 |
chr2:114647028-114647029 |
Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive regionlncRNA
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs576459930 |
chr2:114647034-114647035 |
Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive regionlncRNA
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs539264249 |
chr2:114647084-114647085 |
Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs558869053 |
chr2:114647133-114647134 |
Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs147637827 |
chr2:114647161-114647162 |
Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive regionlncRNA
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs181035242 |
chr2:114647176-114647177 |
Active TSS Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive regionlncRNA
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs555267560 |
chr2:114647214-114647215 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive regionlncRNA
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs368620381 |
chr2:114647261-114647262 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive regionlncRNA
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs142212142 |
chr2:114647285-114647286 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive regionlncRNA
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs563443587 |
chr2:114647324-114647325 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs532099014 |
chr2:114647333-114647334 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs545483948 |
chr2:114647345-114647346 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs147913987 |
chr2:114647346-114647347 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs546010273 |
chr2:114647348-114647349 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs559258604 |
chr2:114647356-114647357 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs36115123 |
chr2:114647361-114647362 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs528241616 |
chr2:114647364-114647365 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs13429261 |
chr2:114647392-114647393 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
23 |
rs7564594 |
chr2:114647432-114647433 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
24 |
rs530085084 |
chr2:114647482-114647483 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs2279838 |
chr2:114647485-114647486 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
26 |
rs569840634 |
chr2:114647498-114647499 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs570168778 |
chr2:114647517-114647518 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs1504044 |
chr2:114647551-114647552 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs144410131 |
chr2:114647555-114647556 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs566293362 |
chr2:114647562-114647563 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs535188294 |
chr2:114647575-114647576 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs112209177 |
chr2:114647586-114647587 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs575206402 |
chr2:114647618-114647619 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs147326241 |
chr2:114647649-114647650 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs543445513 |
chr2:114647660-114647661 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs74423392 |
chr2:114647664-114647665 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs556667500 |
chr2:114647787-114647788 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs576896615 |
chr2:114647805-114647806 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs11538679 |
chr2:114647807-114647808 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs545600121 |
chr2:114647812-114647813 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs559363463 |
chr2:114647823-114647824 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs376457375 |
chr2:114647837-114647838 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs528277571 |
chr2:114647866-114647867 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs541623313 |
chr2:114647889-114647890 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs201719881 |
chr2:114647907-114647908 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs201766782 |
chr2:114647908-114647909 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs368760713 |
chr2:114647917-114647918 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs186459184 |
chr2:114647923-114647924 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs532504291 |
chr2:114647936-114647937 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs552402029 |
chr2:114647945-114647946 |
Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|