Variant report
Variant | esv3380616 |
---|---|
Chromosome Location | chr8:143958651-143996737 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:144)
- CpG islands (count:489)
- Chromatin interactive region (count:8)
- LncRNA region (count:1)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | BATF | chr8:143987622-143987828 | GM12878 | blood: | n/a | chr8:143987764-143987775 |
2 | BHLHE40 | chr8:143959425-143959448 | K562 | blood: | n/a | n/a |
3 | BHLHE40 | chr8:143975344-143975622 | K562 | blood: | n/a | n/a |
4 | BHLHE40 | chr8:143975332-143975632 | HepG2 | liver: | n/a | n/a |
5 | CBX3 | chr8:143993340-143993685 | K562 | blood: | n/a | n/a |
6 | CEBPB | chr8:143975315-143975613 | Hela-S3 | cervix: | n/a | n/a |
7 | CHD2 | chr8:143968205-143968520 | K562 | blood: | n/a | n/a |
8 | CTCF | chr8:143994563-143994638 | GM12892 | blood: | n/a | n/a |
9 | CTCF | chr8:143994599-143994742 | GM10248 | blood: | n/a | chr8:143994656-143994665 chr8:143994632-143994645 |
10 | CTCF | chr8:143994622-143994697 | Hela-S3 | cervix: | n/a | chr8:143994656-143994665 chr8:143994632-143994645 |
11 | CTCF | chr8:143987000-143987150 | GM12875 | blood: | n/a | n/a |
12 | CTCF | chr8:143994581-143994712 | K562 | blood: | n/a | chr8:143994656-143994665 chr8:143994632-143994645 |
13 | CTCF | chr8:143988720-143988870 | HCT-116 | colon: | n/a | n/a |
14 | CTCF | chr8:143994568-143994734 | GM12891 | blood: | n/a | chr8:143994656-143994665 chr8:143994632-143994645 |
15 | CTCF | chr8:143961678-143961759 | GM20000 | blood: | n/a | n/a |
16 | CTCF | chr8:143994720-143994870 | GM12871 | blood: | n/a | n/a |
17 | CTCF | chr8:143994586-143994696 | GM19238 | blood: | n/a | chr8:143994656-143994665 chr8:143994632-143994645 |
18 | CTCF | chr8:143968885-143968916 | K562 | blood: | n/a | n/a |
19 | CUX1 | chr8:143977763-143977837 | K562 | blood: | n/a | n/a |
20 | EBF1 | chr8:143979537-143979979 | GM12878 | blood: | n/a | n/a |
21 | EBF1 | chr8:143989032-143989208 | GM12878 | blood: | n/a | n/a |
22 | EGR1 | chr8:143993819-143994054 | K562 | blood: | n/a | chr8:143993918-143993932 chr8:143993919-143993932 chr8:143993920-143993929 chr8:143993925-143993938 chr8:143993919-143993932 chr8:143993919-143993932 chr8:143993919-143993929 chr8:143993914-143993936 chr8:143993923-143993933 chr8:143993877-143993887 chr8:143993918-143993933 chr8:143993919-143993932 |
23 | EGR1 | chr8:143993744-143994024 | K562 | blood: | n/a | chr8:143993918-143993932 chr8:143993919-143993932 chr8:143993920-143993929 chr8:143993925-143993938 chr8:143993919-143993932 chr8:143993919-143993932 chr8:143993919-143993929 chr8:143993914-143993936 chr8:143993923-143993933 chr8:143993877-143993887 chr8:143993918-143993933 chr8:143993919-143993932 |
24 | ELF1 | chr8:143993382-143993601 | HepG2 | liver: | n/a | chr8:143993487-143993500 |
25 | ELF1 | chr8:143993285-143993676 | K562 | blood: | n/a | chr8:143993487-143993500 |
26 | ELF1 | chr8:143993227-143993853 | MCF-7 | breast: | n/a | chr8:143993487-143993500 |
27 | ELK1 | chr8:143983813-143983816 | Hela-S3 | cervix: | n/a | n/a |
28 | EP300 | chr8:143979443-143980098 | GM12878 | blood: | n/a | n/a |
29 | EP300 | chr8:143987188-143987251 | K562 | blood: | n/a | n/a |
30 | FOSL2 | chr8:143979468-143980152 | HepG2 | liver: | n/a | n/a |
31 | FOXA2 | chr8:143979465-143980049 | A549 | lung: | n/a | n/a |
32 | FOXP2 | chr8:143983504-143983917 | SK-N-MC | brain: | n/a | n/a |
33 | GABPA | chr8:143979778-143980075 | Hela-S3 | cervix: | n/a | n/a |
34 | GABPA | chr8:143979480-143979775 | Hela-S3 | cervix: | n/a | n/a |
35 | GATA1 | chr8:143975138-143975670 | PBDE | blood: | n/a | n/a |
36 | GATA3 | chr8:143981134-143981524 | T-47D | breast: | n/a | n/a |
37 | HCFC1 | chr8:143993429-143993611 | K562 | blood: | n/a | n/a |
38 | HEY1 | chr8:143979414-143980147 | K562 | blood: | n/a | n/a |
39 | IRF4 | chr8:143979516-143979822 | GM12878 | blood: | n/a | n/a |
40 | IRF4 | chr8:143979391-143980186 | GM12878 | blood: | n/a | n/a |
41 | JUN | chr8:143984574-143984774 | K562 | blood: | n/a | n/a |
42 | JUND | chr8:143979829-143980089 | HepG2 | liver: | n/a | n/a |
43 | JUND | chr8:143991527-143991650 | K562 | blood: | n/a | n/a |
44 | MAFK | chr8:143983704-143983817 | HepG2 | liver: | n/a | chr8:143983728-143983743 |
45 | MAFK | chr8:143983696-143983813 | HepG2 | liver: | n/a | chr8:143983728-143983743 |
46 | MAX | chr8:143959375-143959454 | HepG2 | liver: | n/a | chr8:143959383-143959393 |
47 | MAX | chr8:143993376-143993691 | K562 | blood: | n/a | n/a |
48 | MAX | chr8:143959320-143959583 | A549 | lung: | n/a | chr8:143959371-143959381 chr8:143959383-143959393 |
49 | MAX | chr8:143993493-143993519 | NB4 | blood: | n/a | n/a |
50 | MAX | chr8:143993312-143994031 | MCF-7 | breast: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr8:143961145-143961195 | SKMC | muscle: | n/a |
2 | chr8:143961145-143961195 | SKMC | muscle: | n/a |
3 | chr8:143995000-143995050 | NHDF-neo | bronchial: | n/a |
4 | chr8:143992652-143992702 | HPAEpiC | pulmonary alveolar: | n/a |
5 | chr8:143961341-143961391 | GM06990 | blood: | n/a |
6 | chr8:143992652-143992702 | H1-hESC | embryonic stem cell: | embryo |
7 | chr8:143960794-143960844 | NHDF-neo | bronchial: | n/a |
8 | chr8:143961141-143961191 | NH-A | brain: | n/a |
9 | chr8:143961141-143961191 | ProgFib | skin: | n/a |
10 | chr8:143961145-143961195 | T-47D | breast: | n/a |
11 | chr8:143961145-143961195 | AG04450 | lung: | fetal |
12 | chr8:143961341-143961391 | H1-hESC | embryonic stem cell: | embryo |
13 | chr8:143960794-143960844 | PFSK-1 | brain: | n/a |
14 | chr8:143961141-143961191 | GM12892 | blood: | n/a |
15 | chr8:143961391-143961441 | K562 | blood: | n/a |
16 | chr8:143961145-143961195 | BE2_C | brain: | n/a |
17 | chr8:143992652-143992702 | NH-A | brain: | n/a |
18 | chr8:143995000-143995050 | A549 | lung: | n/a |
19 | chr8:143960794-143960844 | HRPEpiC | eye: | n/a |
20 | chr8:143992652-143992702 | GM12878 | blood: | n/a |
21 | chr8:143961341-143961391 | HL-60 | blood: | n/a |
22 | chr8:143961391-143961441 | GM12878 | blood: | n/a |
23 | chr8:143961145-143961195 | HepG2 | liver: | n/a |
24 | chr8:143961141-143961191 | HEEpiC | esophagus: | n/a |
25 | chr8:143995000-143995050 | HepG2 | liver: | n/a |
26 | chr8:143960794-143960844 | HRCEpiC | kidney: | n/a |
27 | chr8:143961341-143961391 | HCPEpiC | choroid plexus: | n/a |
28 | chr8:143960794-143960844 | HEEpiC | esophagus: | n/a |
29 | chr8:143961391-143961441 | HL-60 | blood: | n/a |
30 | chr8:143961341-143961391 | GM12891 | blood: | n/a |
31 | chr8:143961141-143961191 | HPAEpiC | pulmonary alveolar: | n/a |
32 | chr8:143961391-143961441 | HRCEpiC | kidney: | n/a |
33 | chr8:143961141-143961191 | HCF | heart: | n/a |
34 | chr8:143961291-143961341 | GM12891 | blood: | n/a |
35 | chr8:143961391-143961441 | HEK293 | kidney: | embryo |
36 | chr8:143992652-143992702 | HMEC | breast: | n/a |
37 | chr8:143995000-143995050 | ovcar-3 | ovarian: | n/a |
38 | chr8:143961145-143961195 | BJ | skin: | n/a |
39 | chr8:143960794-143960844 | HRE | kidney: | n/a |
40 | chr8:143961391-143961441 | AG09319 | gingival: | n/a |
41 | chr8:143961141-143961191 | GM06990 | blood: | n/a |
42 | chr8:143960794-143960844 | HPAEpiC | pulmonary alveolar: | n/a |
43 | chr8:143992652-143992702 | HCT-116 | colon: | n/a |
44 | chr8:143995000-143995050 | HRPEpiC | eye: | n/a |
45 | chr8:143961145-143961195 | A549 | lung: | n/a |
46 | chr8:143961291-143961341 | HMEC | breast: | n/a |
47 | chr8:143961291-143961341 | K562 | blood: | n/a |
48 | chr8:143961341-143961391 | NHDF-neo | bronchial: | n/a |
49 | chr8:143992652-143992702 | AoSMC | blood vessel: | n/a |
50 | chr8:143961341-143961391 | HepG2 | liver: | n/a |
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No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr8:143956006..143958994-chr8:144119486..144121629,2 | MCF-7 | breast: | |
2 | chr8:143928685..143930379-chr8:143986753..143989580,2 | K562 | blood: | |
3 | chr8:143982631..143984699-chr8:143987404..143990195,2 | K562 | blood: | |
4 | chr8:143976851..143979156-chr8:143982564..143985353,2 | MCF-7 | breast: | |
5 | chr8:143982631..143984699-chr8:143987404..143990195,2 | K562 | blood: | |
6 | chr8:143970505..143972946-chr8:143997611..144000246,2 | MCF-7 | breast: | |
7 | chr8:143955912..143957781-chr8:143987320..143989042,2 | MCF-7 | breast: | |
8 | chr8:143976851..143979156-chr8:143982564..143985353,2 | MCF-7 | breast: |
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No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-LY6E-4 | chr8:143959812-143960330 | NONHSAT129503 |
No data |
No data |
Variant related genes | Relation type |
---|---|
CYP11B1 | TF binding region |
CYP11B1 | CpG island |
ENSG00000179142 | chromatin interactions |
ENSG00000160882 | chromatin interactions |
ENSG00000177335 | chromatin interactions |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs61751147 | chr8:143958660-143958661 | Weak transcription Active TSS | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
2 | rs551914122 | chr8:143958678-143958679 | Weak transcription Active TSS | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
3 | rs61751146 | chr8:143958680-143958681 | Weak transcription Active TSS | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
4 | rs61751145 | chr8:143958688-143958689 | Weak transcription Active TSS | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
5 | rs528027778 | chr8:143958695-143958696 | Weak transcription Active TSS | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
6 | rs61751144 | chr8:143958696-143958697 | Weak transcription Active TSS | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
7 | rs566959856 | chr8:143958697-143958698 | Weak transcription Active TSS | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
8 | rs537814960 | chr8:143958706-143958707 | Weak transcription Active TSS | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
9 | rs61751143 | chr8:143958729-143958730 | Weak transcription Active TSS | Chromatin interactive region | 1 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
10 | rs61751142 | chr8:143958731-143958732 | Weak transcription Active TSS | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
11 | rs568550441 | chr8:143958781-143958782 | Weak transcription Active TSS | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
12 | rs554048672 | chr8:143958784-143958785 | Weak transcription Active TSS | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
13 | rs572264268 | chr8:143958786-143958787 | Weak transcription Active TSS | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
14 | rs542970038 | chr8:143958795-143958796 | Weak transcription Active TSS | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
15 | rs574312809 | chr8:143958798-143958799 | Weak transcription Active TSS | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
16 | rs191976842 | chr8:143958803-143958804 | Weak transcription Active TSS | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
17 | rs146706300 | chr8:143958804-143958805 | Weak transcription Active TSS | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
18 | rs185102236 | chr8:143958805-143958806 | Weak transcription Active TSS | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
19 | rs373713714 | chr8:143958820-143958821 | Weak transcription Active TSS | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
20 | rs35378570 | chr8:143958843-143958844 | Weak transcription Active TSS | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
21 | rs7814006 | chr8:143958911-143958912 | Weak transcription Active TSS | Chromatin interactive region | 1 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
22 | rs139090252 | chr8:143958917-143958918 | Weak transcription Active TSS | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
23 | rs66470473 | chr8:143958930-143958931 | Weak transcription Active TSS | Chromatin interactive region | 1 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
24 | rs188817798 | chr8:143958940-143958941 | Weak transcription Active TSS | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
25 | rs7814020 | chr8:143958941-143958942 | Weak transcription Active TSS | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
26 | rs113143466 | chr8:143958969-143958970 | Weak transcription Active TSS | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
27 | rs368921558 | chr8:143959021-143959022 | Weak transcription Transcr. at gene 5' and 3' | n/a | n/a | Overlapped CNVs | n/a |
28 | rs560343228 | chr8:143959053-143959054 | Weak transcription Transcr. at gene 5' and 3' | n/a | n/a | Overlapped CNVs | n/a |
29 | rs80101721 | chr8:143959067-143959068 | Weak transcription Transcr. at gene 5' and 3' | n/a | n/a | Overlapped CNVs | n/a |
30 | rs71513667 | chr8:143959076-143959077 | Weak transcription Transcr. at gene 5' and 3' | n/a | n/a | Overlapped CNVs | n/a |
31 | rs527865805 | chr8:143959113-143959114 | Weak transcription Transcr. at gene 5' and 3' | n/a | n/a | Overlapped CNVs | n/a |
32 | rs549281636 | chr8:143959121-143959122 | Weak transcription Transcr. at gene 5' and 3' | n/a | n/a | Overlapped CNVs | n/a |
33 | rs561219388 | chr8:143959144-143959145 | Weak transcription Transcr. at gene 5' and 3' | n/a | n/a | Overlapped CNVs | n/a |
34 | rs374195902 | chr8:143959165-143959166 | Weak transcription Transcr. at gene 5' and 3' | n/a | n/a | Overlapped CNVs | n/a |
35 | rs75717953 | chr8:143959174-143959175 | Weak transcription Transcr. at gene 5' and 3' | n/a | n/a | Overlapped CNVs | n/a |
36 | rs368303228 | chr8:143959176-143959177 | Weak transcription Transcr. at gene 5' and 3' | n/a | n/a | Overlapped CNVs | n/a |
37 | rs9657020 | chr8:143959188-143959189 | Weak transcription Transcr. at gene 5' and 3' | n/a | n/a | Overlapped CNVs | n/a |
38 | rs547491853 | chr8:143959205-143959206 | ZNF genes & repeats Weak transcription Transcr. at gene 5' and 3' | n/a | n/a | Overlapped CNVs | n/a |
39 | rs11775687 | chr8:143959219-143959220 | ZNF genes & repeats Weak transcription Transcr. at gene 5' and 3' | n/a | n/a | Overlapped CNVs | n/a |
40 | rs536414549 | chr8:143959241-143959242 | ZNF genes & repeats Weak transcription Transcr. at gene 5' and 3' | n/a | n/a | Overlapped CNVs | n/a |
41 | rs7818826 | chr8:143959250-143959251 | ZNF genes & repeats Weak transcription Transcr. at gene 5' and 3' | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | mRNA abundance |
42 | rs144897910 | chr8:143959257-143959258 | ZNF genes & repeats Weak transcription Transcr. at gene 5' and 3' | n/a | n/a | Overlapped CNVs | n/a |
43 | rs368740606 | chr8:143959262-143959263 | ZNF genes & repeats Weak transcription Transcr. at gene 5' and 3' | n/a | n/a | Overlapped CNVs | n/a |
44 | rs568561435 | chr8:143959270-143959271 | ZNF genes & repeats Weak transcription Transcr. at gene 5' and 3' | n/a | n/a | Overlapped CNVs | n/a |
45 | rs9657021 | chr8:143959272-143959273 | ZNF genes & repeats Weak transcription Transcr. at gene 5' and 3' | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | mRNA abundance |
46 | rs79102214 | chr8:143959279-143959280 | ZNF genes & repeats Weak transcription Transcr. at gene 5' and 3' | n/a | n/a | Overlapped CNVs | n/a |
47 | rs7818953 | chr8:143959289-143959290 | ZNF genes & repeats Weak transcription Transcr. at gene 5' and 3' | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
48 | rs545132363 | chr8:143959296-143959297 | ZNF genes & repeats Weak transcription Transcr. at gene 5' and 3' | n/a | n/a | Overlapped CNVs | n/a |
49 | rs12542799 | chr8:143959311-143959312 | ZNF genes & repeats Weak transcription Transcr. at gene 5' and 3' | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
50 | rs75079139 | chr8:143959332-143959333 | ZNF genes & repeats Weak transcription Transcr. at gene 5' and 3' | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Ewing''s sarcoma | 21437220 | CNVD |
Autism | 19415332 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Malaria | 21533027 | CNVD |
Non-syndromic sensorineural hearing loss | 22037309 | CNVD |
Esophageal cancer | 21851588 | CNVD |
Gastric cancer | 17908304 | CNVD |
Acute promyelocytic leukemia | 19109227 | CNVD |
Breast cancer | 21245420 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Liver carcinoma | 19366792 | CNVD |
Seminomas | 18059402 | CNVD |
Acute lymphoblastic leukemia | 21390130 | CNVD |
Thyroid cancer | 19087340 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Testicular cancer | 18059402 | CNVD |
Breast cancer | 17133270 | CNVD |
Breast cancer | 21509527 | CNVD |
Breast cancer | 21858162 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Acute lymphoblastic leukemia | 21248843 | CNVD |
abnormal development | 18461090 | CNVD |
Oral cancer | 21386901 | CNVD |
Uveal melanoma | 21693616 | CNVD |
Langer-Giedion syndrome | 22283845 | CNVD |
Cancer | 21637783 | CNVD |
Splenic marginal zone lymphoma | 21957467 | CNVD |
Breast cancer | 20632083 | CNVD |
Breast cancer | 17603634 | CNVD |
Breast cancer | 19602461 | CNVD |
Cancer | 22429812 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Glioblastoma multiforme | 19960244 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Hepatocellular carcinoma | 22174799 | CNVD |
Oral cancer | 19627613 | CNVD |
Prostate cancer | 21088497 | CNVD |
colon cancer | 17210682 | CNVD |
Breast cancer | 21264507 | CNVD |
Breast cancer | 22028636 | CNVD |
Acute myeloid leukemia | 16864856 | CNVD |
Cancer | 16751803 | CNVD |
Esophageal squamous carcinoma | 18350619 | CNVD |
Gastric cancer | 17167181 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Breast cancer | 16461572 | CNVD |
Human rectal carcinomas | 16397240 | CNVD |
Medulloblastoma | 16968546 | CNVD |
head and neck squamous cell carcinoma | 18028549 | CNVD |
Breast cancer | 17001317 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
Ewing''s sarcoma | 17952124 | CNVD |
Urothelial carcinoma | 21177765 | CNVD |
Breast cancer | 16608533 | CNVD |
Metanephric adenoma | 20802469 | CNVD |
Hepatocellular carcinoma | 18803288 | CNVD |
Prostate cancer | 18632612 | CNVD |
Ovarian cancer | 22174824 | CNVD |
Prostate cancer | 16573809 | CNVD |
Malignant peripheral nerve sheath tumor | 18522746 | CNVD |
Adenocarcinoma | 21044232 | CNVD |
Squamous cell cancer | 20885788 | CNVD |
High-grade prostatic intraepithelial neoplasia | 16573809 | CNVD |
Acute lymphoblastic leukemia | 17690704 | CNVD |
Breast cancer | 17393978 | CNVD |
Burkitt''s lymphoma | 18698080 | CNVD |
Non-syndromic sensorineural hearing loss | 20606397 | CNVD |
Breast cancer | 17899364 | CNVD |
lymphocytic leukemia | 21291569 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
Developmental delay | 21147756 | CNVD |
Non-small cell lung cancer | 19010865 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Papillary thyroid cancer | 17515504 | CNVD |
Basal cell lymphoma | 17053054 | CNVD |
Breast cancer | 22532251 | CNVD |
Cervical cancer | 21062161 | CNVD |
Cancer | 21129771 | CNVD |
benign familial neonatal convulsions | 18472482 | CNVD |
Breast cancer | 16417655 | CNVD |
Astrocytoma | 17387387 | CNVD |
Cancer | 21183584 | CNVD |
Follicular lymphoma | 20505157 | CNVD |
T-cell lymphomas | 19863542 | CNVD |
Colorectal cancer | 20709793 | CNVD |
Medulloblastoma | 20607354 | CNVD |
Breast cancer | 20814816 | CNVD |
Colorectal cancer | 22486879 | CNVD |
Breast cancer | 17908964 | CNVD |
Colorectal cancer | 20031965 | CNVD |
Hepatocellular carcinoma | 16750200 | CNVD |
Ovarian cancer | 17908964 | CNVD |
Ovarian cancer | 20031965 | CNVD |
Prostate cancer | 20031965 | CNVD |
Non-small cell lung cancer | 17643093 | CNVD |
Prostate cancer | 19242612 | CNVD |
Colorectal cancer | 16774939 | CNVD |
Chronic lymphocytic leukemia | 20421269 | CNVD |
Multiple myeloma | 16616336 | CNVD |
low-grade B-cell lymphoma tumor | 18367492 | CNVD |
Acute lymphoblastic leukemia | 18458336 | CNVD |
Acute lymphoblastic leukemia | 21339820 | CNVD |
Breast cancer | 21364760 | CNVD |
Pilocytic astrocytoma | 18622384 | CNVD |
Pilomyxoid astrocytoma | 18622384 | CNVD |
Gastric cancer | 24379144 | CNVD |
Sezary syndrome | 18413736 | CNVD |
Lung cancer | 18438408 | CNVD |
Breast cancer | 21785460 | CNVD |
Breast cancer | 20409316 | CNVD |
Colorectal cancer | 16272173 | CNVD |
Glioma | 17123091 | CNVD |
Lung adenocarcinoma | 17086460 | CNVD |
Lung cancer | 17086460 | CNVD |
Malignant mesothelioma | 18160781 | CNVD |
Pleural malignant mesothelioma | 18160781 | CNVD |
Esophageal squamous carcinoma | 17470683 | CNVD |
head and neck squamous cell carcinoma | 16740747 | CNVD |
Esophageal squamous carcinoma | 18405350 | CNVD |
Gastric cancer | 16891809 | CNVD |
Astrocytoma | 22246337 | CNVD |
Colorectal cancer | 21645411 | CNVD |
Breast cancer | 21806811 | CNVD |
Chylomicronemia | 22008945 | CNVD |
Heart disease | 21282601 | CNVD |
Chordoma | 21602918 | CNVD |
Neuroblastoma | 18923191 | CNVD |
Primary central nervous system lymphoma | 21088137 | CNVD |
Ovarian cancer | 20844748 | CNVD |
Multiple myeloma | 16461302 | CNVD |
Breast cancer | 16397240 | CNVD |
Colorectal cancer | 19455253 | CNVD |
Myxofibrosarcoma | 16751306 | CNVD |
Melanoma | 18172304 | CNVD |
Acute lymphoblastic leukemia | 21098271 | CNVD |
Cancer | 20164920 | CNVD |
Oral cancer | 22144094 | CNVD |
XY gonadal dysgenesis | 20685758 | CNVD |
Cancer | 20581869 | CNVD |
Oral squamous cell carcinoma | 21853135 | CNVD |
Pancreatic cancer | 21811587 | CNVD |
Prostate cancer | 22341455 | CNVD |
T-cell lymphomas | 22341440 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
Breast cancer | 22522925 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr8:143956600-143960800 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
2 | chr8:143958000-143959000 | Active TSS | Fetal Adrenal Gland | Adrenal Gland |
3 | chr8:143959000-143961000 | Transcr. at gene 5' and 3' | Fetal Adrenal Gland | Adrenal Gland |
4 | chr8:143959200-143960000 | ZNF genes & repeats | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
5 | chr8:143960800-143961200 | Enhancers | iPS DF 19.11 Cell Line | embryonic stem cell |
6 | chr8:143961000-143961200 | Active TSS | Fetal Adrenal Gland | Adrenal Gland |
7 | chr8:143961000-143961400 | Enhancers | Spleen | Spleen |
8 | chr8:143961200-143961400 | Flanking Active TSS | Fetal Adrenal Gland | Adrenal Gland |
9 | chr8:143961200-143969800 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
10 | chr8:143961400-143961800 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
11 | chr8:143969800-143970400 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
12 | chr8:143970400-143992600 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
13 | chr8:143975000-143975600 | Enhancers | Duodenum Mucosa | Duodenum |
14 | chr8:143975800-143976000 | ZNF genes & repeats | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
15 | chr8:143976000-143977400 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
16 | chr8:143977400-143977600 | Enhancers | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
17 | chr8:143979000-143979600 | Enhancers | Cortex derived primary cultured neurospheres | brain |
18 | chr8:143988000-143989200 | Enhancers | HepG2 | liver |
19 | chr8:143991200-143991600 | Enhancers | Primary T cells fromperipheralblood | blood |
20 | chr8:143991200-143991600 | Enhancers | Primary T killer naive cells fromperipheralblood | blood |
21 | chr8:143991200-143992200 | Enhancers | Spleen | Spleen |
22 | chr8:143991400-143992000 | Enhancers | Primary B cells from peripheral blood | blood |
23 | chr8:143992200-143993200 | Weak transcription | Spleen | Spleen |
24 | chr8:143992600-143993400 | Enhancers | iPS DF 19.11 Cell Line | embryonic stem cell |
25 | chr8:143993200-143993400 | Enhancers | Spleen | Spleen |
26 | chr8:143993400-143993600 | Enhancers | Foreskin Fibroblast Primary Cells skin02 | Skin |
27 | chr8:143993400-143993600 | Genic enhancers | Spleen | Spleen |
28 | chr8:143993400-143993800 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
29 | chr8:143993600-143995000 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
30 | chr8:143993600-143995200 | Weak transcription | Spleen | Spleen |
31 | chr8:143993800-143994200 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
32 | chr8:143994200-144003200 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
33 | chr8:143994400-143994600 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
34 | chr8:143994800-143995400 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
35 | chr8:143995000-143995400 | Enhancers | Foreskin Fibroblast Primary Cells skin02 | Skin |
36 | chr8:143995200-143996000 | Enhancers | Spleen | Spleen |
37 | chr8:143995400-143995600 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
38 | chr8:143996000-144003000 | Weak transcription | Spleen | Spleen |