No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs568328949 |
chr1:227975058-227975059 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs529186624 |
chr1:227975136-227975137 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs142547487 |
chr1:227975147-227975148 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs370492403 |
chr1:227975148-227975149 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs373608475 |
chr1:227975154-227975155 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs117977156 |
chr1:227975249-227975250 |
Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs557529540 |
chr1:227975269-227975270 |
Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs566467719 |
chr1:227975274-227975275 |
Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs370379326 |
chr1:227975295-227975296 |
Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs150513352 |
chr1:227975300-227975301 |
Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs553266069 |
chr1:227975314-227975315 |
Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs60255904 |
chr1:227975414-227975415 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers
|
Chromatin interactive regionlncRNA
|
3 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
13 |
rs535723634 |
chr1:227975525-227975526 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers
|
Chromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs557578639 |
chr1:227975542-227975543 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers
|
Chromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs575739352 |
chr1:227975576-227975577 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers
|
Chromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs76488127 |
chr1:227975587-227975588 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers
|
Chromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs543156557 |
chr1:227975657-227975658 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Weak transcription
|
Chromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs546287478 |
chr1:227975675-227975676 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Weak transcription
|
Chromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs561311977 |
chr1:227975779-227975780 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs564397467 |
chr1:227975809-227975810 |
Bivalent/Poised TSS Active TSS Bivalent Enhancer Weak transcription Enhancers
|
Chromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs34752445 |
chr1:227975811-227975812 |
Bivalent/Poised TSS Active TSS Bivalent Enhancer Weak transcription Enhancers
|
Chromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs573291750 |
chr1:227975823-227975824 |
Bivalent/Poised TSS Active TSS Bivalent Enhancer Weak transcription Enhancers
|
Chromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs35898137 |
chr1:227975840-227975841 |
Bivalent/Poised TSS Active TSS Bivalent Enhancer Weak transcription Enhancers
|
Chromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs184218271 |
chr1:227975849-227975850 |
Bivalent/Poised TSS Active TSS Bivalent Enhancer Weak transcription Enhancers
|
Chromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs540665519 |
chr1:227975896-227975897 |
Bivalent/Poised TSS Active TSS Bivalent Enhancer Weak transcription Enhancers
|
Chromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs562041619 |
chr1:227975902-227975903 |
Bivalent/Poised TSS Active TSS Bivalent Enhancer Weak transcription Enhancers
|
Chromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs529253891 |
chr1:227975912-227975913 |
Bivalent/Poised TSS Active TSS Bivalent Enhancer Weak transcription Enhancers
|
Chromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs188844739 |
chr1:227976021-227976022 |
Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Enhancers
|
Chromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs140253371 |
chr1:227976148-227976149 |
Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Enhancers
|
Chromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs532938890 |
chr1:227976166-227976167 |
Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Enhancers
|
Chromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs371881433 |
chr1:227976263-227976264 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers
|
Chromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs191777439 |
chr1:227976276-227976277 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers
|
Chromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs566194209 |
chr1:227976291-227976292 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers
|
Chromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs533624796 |
chr1:227976292-227976293 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers
|
Chromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs548594346 |
chr1:227976306-227976307 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers
|
Chromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs184582687 |
chr1:227976309-227976310 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers
|
Chromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs189102981 |
chr1:227976330-227976331 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers
|
Chromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs200451667 |
chr1:227976399-227976400 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers
|
Chromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs374371023 |
chr1:227976415-227976416 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'
|
Chromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs144519274 |
chr1:227976420-227976421 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'
|
Chromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs540486284 |
chr1:227976429-227976430 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'
|
Chromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs558316942 |
chr1:227976443-227976444 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'
|
Chromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs573403232 |
chr1:227976453-227976454 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'
|
Chromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs540728336 |
chr1:227976467-227976468 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'
|
Chromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs562107715 |
chr1:227976479-227976480 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'
|
Chromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs10799449 |
chr1:227976498-227976499 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'
|
Chromatin interactive regionlncRNA
|
3 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
47 |
rs544499291 |
chr1:227976534-227976535 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'
|
Chromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs562615351 |
chr1:227976548-227976549 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'
|
Chromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs182439094 |
chr1:227976554-227976555 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'
|
Chromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs147849117 |
chr1:227976584-227976585 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'
|
Chromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|