Variant report

Variant	esv3382338
Chromosome Location	chr19:23476728-23631356
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1826)
CpG islands
(count:612)
Chromatin interactive
region (count:16)
LncRNA
region (count:141)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1826 , 50 per page) page: 1 2 3 4 5 6 7 ... 37

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr19:23592964-23593248	HepG2	liver:	n/a	n/a
2	ARID3A	chr19:23577108-23577573	HepG2	liver:	n/a	n/a
3	ARID3A	chr19:23578021-23578544	HepG2	liver:	n/a	n/a
4	ARID3A	chr19:23584631-23584918	HepG2	liver:	n/a	n/a
5	ARID3A	chr19:23582385-23582618	HepG2	liver:	n/a	n/a
6	ARID3A	chr19:23586013-23586771	HepG2	liver:	n/a	n/a
7	ATF1	chr19:23578242-23578507	K562	blood:	n/a	n/a
8	ATF1	chr19:23495315-23495375	K562	blood:	n/a	n/a
9	BACH1	chr19:23598347-23598392	H1-hESC	embryonic stem cell:	n/a	n/a
10	BACH1	chr19:23487075-23487353	K562	blood:	n/a	chr19:23487225-23487239
11	BACH1	chr19:23487080-23487334	H1-hESC	embryonic stem cell:	n/a	chr19:23487225-23487239
12	BCLAF1	chr19:23577806-23578259	GM12878	blood:	n/a	chr19:23577863-23577876
13	BCLAF1	chr19:23577695-23578386	GM12878	blood:	n/a	chr19:23577863-23577876
14	BHLHE40	chr19:23623769-23623831	HepG2	liver:	n/a	n/a
15	BHLHE40	chr19:23578060-23578466	GM12878	blood:	n/a	n/a
16	BRCA1	chr19:23577365-23578276	HepG2	liver:	n/a	n/a
17	BRCA1	chr19:23577359-23578465	Hela-S3	cervix:	n/a	n/a
18	BRCA1	chr19:23577422-23577533	GM12878	blood:	n/a	n/a
19	BRCA1	chr19:23577414-23577648	H1-hESC	embryonic stem cell:	n/a	n/a
20	BRCA1	chr19:23598769-23598984	H1-hESC	embryonic stem cell:	n/a	n/a
21	BRCA1	chr19:23477057-23477096	GM12878	blood:	n/a	n/a
22	CEBPB	chr19:23578065-23578515	HepG2	liver:	n/a	n/a
23	CEBPB	chr19:23500993-23501113	HepG2	liver:	n/a	n/a
24	CEBPB	chr19:23504786-23505137	IMR90	lung:	n/a	n/a
25	CEBPB	chr19:23503921-23504021	HepG2	liver:	n/a	n/a
26	CEBPB	chr19:23587676-23588015	HepG2	liver:	n/a	n/a
27	CEBPB	chr19:23496682-23497111	HepG2	liver:	n/a	n/a
28	CEBPB	chr19:23501814-23502681	HepG2	liver:	n/a	n/a
29	CEBPB	chr19:23574089-23574553	MCF-7	breast:	n/a	n/a
30	CEBPB	chr19:23590509-23591131	A549	lung:	n/a	n/a
31	CEBPB	chr19:23590429-23591016	MCF-7	breast:	n/a	n/a
32	CEBPB	chr19:23504797-23505116	MCF-7	breast:	n/a	n/a
33	CEBPB	chr19:23496706-23497071	A549	lung:	n/a	n/a
34	CEBPB	chr19:23590947-23591178	Hela-S3	cervix:	n/a	n/a
35	CEBPB	chr19:23584640-23585720	HepG2	liver:	n/a	n/a
36	CEBPB	chr19:23499135-23499414	HepG2	liver:	n/a	n/a
37	CEBPB	chr19:23533521-23533702	HepG2	liver:	n/a	n/a
38	CEBPB	chr19:23578165-23578556	Hela-S3	cervix:	n/a	n/a
39	CEBPB	chr19:23574085-23574513	MCF-7	breast:	n/a	n/a
40	CEBPB	chr19:23585264-23585525	K562	blood:	n/a	n/a
41	CEBPB	chr19:23584727-23585585	Hela-S3	cervix:	n/a	n/a
42	CEBPB	chr19:23578246-23578513	H1-hESC	embryonic stem cell:	n/a	n/a
43	CEBPB	chr19:23590403-23591203	HepG2	liver:	n/a	n/a
44	CEBPB	chr19:23590437-23591084	IMR90	lung:	n/a	n/a
45	CEBPB	chr19:23582431-23582737	HepG2	liver:	n/a	n/a
46	CEBPB	chr19:23584694-23585711	HepG2	liver:	n/a	n/a
47	CEBPB	chr19:23493477-23494639	HepG2	liver:	n/a	n/a
48	CEBPB	chr19:23590450-23591152	HepG2	liver:	n/a	n/a
49	CEBPB	chr19:23589953-23590151	HepG2	liver:	n/a	n/a
50	CEBPB	chr19:23578335-23578468	HepG2	liver:	n/a	n/a

(count:612 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:23578365-23578415	NB4	blood:	n/a
2	chr19:23541643-23541693	GM06990	blood:	n/a
3	chr19:23578365-23578415	NB4	blood:	n/a
4	chr19:23541643-23541693	GM06990	blood:	n/a
5	chr19:23578679-23578729	AG09309	skin:	n/a
6	chr19:23578679-23578729	ovcar-3	ovarian:	n/a
7	chr19:23577714-23577764	HPAEpiC	pulmonary alveolar:	n/a
8	chr19:23577714-23577764	HEEpiC	esophagus:	n/a
9	chr19:23578241-23578291	T-47D	breast:	n/a
10	chr19:23578679-23578729	H1-hESC	embryonic stem cell:	embryo
11	chr19:23598854-23598904	Hepatocyte	liver:	n/a
12	chr19:23578377-23578427	IMR90	lung:	fetal
13	chr19:23541643-23541693	NH-A	brain:	n/a
14	chr19:23541643-23541693	U87	brain:	n/a
15	chr19:23541643-23541693	T-47D	breast:	n/a
16	chr19:23578063-23578113	A549	lung:	n/a
17	chr19:23577714-23577764	H1-hESC	embryonic stem cell:	embryo
18	chr19:23578377-23578427	SK-N-SH_RA	brain:	n/a
19	chr19:23578260-23578310	SK-N-SH_RA	brain:	n/a
20	chr19:23578241-23578291	HNPCEpiC	eye:	n/a
21	chr19:23578679-23578729	PFSK-1	brain:	n/a
22	chr19:23541643-23541693	ovcar-3	ovarian:	n/a
23	chr19:23598854-23598904	HCPEpiC	choroid plexus:	n/a
24	chr19:23578365-23578415	HCT-116	colon:	n/a
25	chr19:23578260-23578310	ovcar-3	ovarian:	n/a
26	chr19:23578260-23578310	MCF10A-Er-Src	breast:	n/a
27	chr19:23578365-23578415	Jurkat	blood:	n/a
28	chr19:23578377-23578427	RPTEC	kidney:	n/a
29	chr19:23577714-23577764	U87	brain:	n/a
30	chr19:23541643-23541693	PrEC	prostate:	n/a
31	chr19:23598854-23598904	MCF-7	breast:	n/a
32	chr19:23578260-23578310	SKMC	muscle:	n/a
33	chr19:23578365-23578415	AG04449	skin:	fetal
34	chr19:23578063-23578113	SKMC	muscle:	n/a
35	chr19:23577714-23577764	MCF-7	breast:	n/a
36	chr19:23578365-23578415	HIPEpiC	eye:	n/a
37	chr19:23578063-23578113	NB4	blood:	n/a
38	chr19:23578260-23578310	HIPEpiC	eye:	n/a
39	chr19:23578377-23578427	HCT-116	colon:	n/a
40	chr19:23578241-23578291	HIPEpiC	eye:	n/a
41	chr19:23578241-23578291	HCT-116	colon:	n/a
42	chr19:23578063-23578113	LNCaP	prostate:	n/a
43	chr19:23578365-23578415	GM12892	blood:	n/a
44	chr19:23578260-23578310	HEEpiC	esophagus:	n/a
45	chr19:23577714-23577764	ECC-1	luminal epithelium:	n/a
46	chr19:23598854-23598904	GM12891	blood:	n/a
47	chr19:23578679-23578729	HEK293	kidney:	embryo
48	chr19:23578241-23578291	NB4	blood:	n/a
49	chr19:23578292-23578342	AG09309	skin:	n/a
50	chr19:23578377-23578427	HAEpiC	amniotic membrane:	n/a

(count:16 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr19:23574385..23576315-chr19:23576535..23579430,2	K562	blood:
2	chr19:23577154..23579229-chr19:23583278..23584951,2	MCF-7	breast:
3	chr19:23571146..23574036-chr19:23574733..23577243,2	K562	blood:
4	chr19:23564648..23566828-chr19:23577196..23579466,2	MCF-7	breast:
5	chr19:23577656..23578478-chr19:49121947..49122666,2	NB4	blood:
6	chr19:23597097..23600084-chr19:24215418..24217838,2	MCF-7	breast:
7	chr19:23598106..23598617-chr19:24216264..24217103,2	MCF-7	breast:
8	chr19:23571146..23574036-chr19:23574733..23577243,2	K562	blood:
9	chr19:23576348..23579660-chr19:23867719..23870587,3	MCF-7	breast:
10	chr19:23571146..23573840-chr19:23574386..23577614,3	K562	blood:
11	chr19:23571146..23573840-chr19:23574386..23577614,3	K562	blood:
12	chr19:23598116..23599107-chr19:24216116..24216947,3	MCF-7	breast:
13	chr19:23598051..23598951-chr19:24216258..24216783,2	NB4	blood:
14	chr19:23597107..23600085-chr19:24215651..24217575,2	MCF-7	breast:
15	chr19:23520093..23520713-chr21:9826403..9827051,2	MCF-7	breast:
16	chr19:23576617..23579164-chr19:23594549..23597394,2	MCF-7	breast:

(count:141 , 50 per page) page: 1 2 3

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-AC092329.1-2	chr19:23493350-23493472	NONHSAT063894
2	lnc-ZNF91-1	chr19:23587753-23587910	ENSG00000269416.1
3	lnc-AC092329.1-2	chr19:23487812-23487933	XLOC_013275
4	lnc-AC092329.1-2	chr19:23487809-23487933	XLOC_013275
5	lnc-ZNF91-1	chr19:23584979-23585314	NONHSAT063906
6	lnc-ZNF91-1	chr19:23588802-23588909	NONHSAT063906
7	lnc-ZNF91-1	chr19:23588802-23588907	ENSG00000246181
8	lnc-AC092329.1-2	chr19:23541232-23541650	NONHSAT063902
9	lnc-ZNF91-1	chr19:23598696-23598849	ENSG00000269416.1
10	lnc-ZNF91-1	chr19:23588802-23588899	NONHSAT063917
11	lnc-AC092329.1-2	chr19:23521678-23521856	NONHSAT063903
12	lnc-ZNF91-1	chr19:23588060-23588137	NONHSAT063918
13	lnc-ZNF730-14	chr19:23586016-23586333	NONHSAT063915
14	lnc-AC092329.1-2	chr19:23491532-23491899	XLOC_013275
15	lnc-ZNF91-1	chr19:23586522-23586549	ENSG00000246181
16	lnc-AC092329.1-2	chr19:23491545-23491899	XLOC_013275
17	lnc-AC092329.1-2	chr19:23493350-23493434	XLOC_013275
18	lnc-ZNF91-1	chr19:23584979-23585314	ENSG00000246181
19	lnc-ZNF91-1	chr19:23587753-23587910	NONHSAT063908
20	lnc-AC092329.1-2	chr19:23487809-23487915	XLOC_013275
21	lnc-ZNF730-3	chr19:23502462-23502571	XLOC_013021
22	lnc-ZNF91-1	chr19:23585164-23585314	ENSG00000269416.1
23	lnc-ZNF91-1	chr19:23583789-23583849	ENSG00000269416.1
24	lnc-ZNF91-1	chr19:23586008-23586295	ENSG00000246181
25	lnc-AC092329.1-2	chr19:23491726-23491899	XLOC_013275
26	lnc-ZNF91-1	chr19:23588060-23588137	ENSG00000246181
27	lnc-ZNF91-1	chr19:23586008-23586295	ENSG00000269416.1
28	lnc-AC092329.1-2	chr19:23489611-23491899	NONHSAT063892
29	lnc-AC092329.1-2	chr19:23487801-23487933	NONHSAT063886
30	lnc-ZNF91-1	chr19:23586008-23586295	ENSG00000269416.1
31	lnc-ZNF91-1	chr19:23588060-23588137	ENSG00000246181
32	lnc-ZNF91-1	chr19:23588060-23588137	NONHSAT063908
33	lnc-ZNF730-12	chr19:23563119-23563678	NONHSAT063904
34	lnc-ZNF91-1	chr19:23585219-23585314	ENSG00000269416.1
35	lnc-ZNF91-1	chr19:23582041-23583849	ENSG00000246181
36	lnc-AC092329.1-2	chr19:23491726-23491899	XLOC_013275
37	lnc-ZNF91-1	chr19:23587753-23587910	ENSG00000269416.1
38	lnc-AC092329.1-2	chr19:23491726-23491899	NONHSAT063886
39	lnc-ZNF91-1	chr19:23586008-23586295	ENSG00000246181
40	lnc-ZNF91-1	chr19:23588060-23588137	ENSG00000269416.1
41	lnc-ZNF91-1	chr19:23587554-23587648	ENSG00000269416.1
42	lnc-ZNF91-1	chr19:23598706-23598867	ENSG00000269416.1
43	lnc-ZNF91-1	chr19:23588060-23588137	ENSG00000269416.1
44	lnc-AC092329.1-2	chr19:23491529-23491899	NONHSAT063894
45	lnc-ZNF91-1	chr19:23590700-23590893	ENSG00000269416.1
46	lnc-AC092329.1-2	chr19:23520633-23522939	NONHSAT063900
47	lnc-ZNF91-1	chr19:23586522-23586549	ENSG00000269416.1
48	lnc-AC092329.1-2	chr19:23541635-23541782	NONHSAT063901
49	lnc-ZNF91-1	chr19:23586008-23586295	NONHSAT063908
50	lnc-ZNF91-1	chr19:23586522-23586549	ENSG00000269416.1

No data

Variant related genes	Relation type
ENSG00000269416	TF binding region
ENSG00000268992	TF binding region
ENSG00000269431	TF binding region
VN1R92P	TF binding region
ZNF91	TF binding region
ENSG00000267934	TF binding region
ENSG00000269416	CpG island
ENSG00000268992	CpG island
ENSG00000269431	CpG island
VN1R92P	CpG island
ZNF91	CpG island
ENSG00000267934	CpG island
ENSG00000167232	chromatin interactions
ENSG00000268362	chromatin interactions
ENSG00000213096	chromatin interactions
ENSG00000063177	chromatin interactions
ENSG00000063176	chromatin interactions
ENSG00000197372	chromatin interactions
ARCN1	miRNA target sites
TES	miRNA target sites
ARF3	miRNA target sites
NFIB	miRNA target sites
TBC1D22B	miRNA target sites
NR4A1	miRNA target sites
NR3C2	miRNA target sites
ELK3	miRNA target sites
TMEM30A	miRNA target sites
SP4	miRNA target sites
GTF2IRD2	miRNA target sites
ELK4	miRNA target sites
SOD2	miRNA target sites
EIF1AX	miRNA target sites
ELMO2	miRNA target sites
GABRB3	miRNA target sites
EIF2C2	miRNA target sites
PLS3	miRNA target sites
TNKS	miRNA target sites
HIATL1	miRNA target sites
DNMBP	miRNA target sites
FAM199X	miRNA target sites
ALG9	miRNA target sites

Extended variants
information (count: 5489 )
Associated
traits (count: 45 )

Variant overlapped rSNPs/rCNVs (count:5489 , 50 per page) page: 1 2 3 4 5 6 7 ... 110

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs78886428	chr19:23476739-23476740	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs79256664	chr19:23476743-23476744	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs77129917	chr19:23476745-23476746	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs76365286	chr19:23476751-23476752	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs75680785	chr19:23476753-23476754	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs77337801	chr19:23476754-23476755	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs78844017	chr19:23476758-23476759	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs79854416	chr19:23476768-23476769	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs77579707	chr19:23476770-23476771	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs79505513	chr19:23476785-23476786	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs398101143	chr19:23476787-23476788	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs13382101	chr19:23476810-23476811	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
13	rs76826201	chr19:23476816-23476817	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs77291999	chr19:23476818-23476819	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs77057012	chr19:23476822-23476823	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs172413	chr19:23476829-23476830	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
17	rs80321833	chr19:23476830-23476831	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs118047216	chr19:23476834-23476835	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs574992697	chr19:23476839-23476840	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs77955961	chr19:23476846-23476847	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs77242023	chr19:23476850-23476851	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs75475194	chr19:23476858-23476859	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs74348988	chr19:23476859-23476860	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs554183117	chr19:23476869-23476870	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs79167664	chr19:23476871-23476872	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs572590250	chr19:23476872-23476873	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs78723652	chr19:23476880-23476881	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs77665127	chr19:23476881-23476882	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs546355996	chr19:23476900-23476901	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs79656977	chr19:23476904-23476905	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs76198294	chr19:23476907-23476908	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs76576157	chr19:23476915-23476916	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs564551783	chr19:23476932-23476933	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs200273709	chr19:23477005-23477006	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs369022831	chr19:23477068-23477069	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs79565295	chr19:23477083-23477084	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs532381633	chr19:23477087-23477088	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs544065163	chr19:23477093-23477094	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs141200911	chr19:23477115-23477116	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs80174153	chr19:23477126-23477127	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs530247793	chr19:23477146-23477147	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs200070619	chr19:23477171-23477172	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs537825741	chr19:23477185-23477186	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs76341176	chr19:23477195-23477196	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs76956344	chr19:23477207-23477208	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs200159512	chr19:23477210-23477211	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs372508935	chr19:23477221-23477222	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs200329578	chr19:23477224-23477225	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs182017767	chr19:23477237-23477238	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs73563440	chr19:23477238-23477239	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a

Variant related diseases (count:45)

Disease	PMID	Source
Medulloblastoma	16783165	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Prostate cancer	16573809	CNVD
Chordoma	18071362	CNVD
Metanephric adenoma	20802469	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	21979893	CNVD
Oligodendroglial tumors	17285580	CNVD
Oral cancer	21386901	CNVD
ovarian endometriomas	16273235	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Cervical cancer	21063398	CNVD
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Ovarian cancer	21720365	CNVD
Cancer	20164919	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Lung cancer	18438408	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Myelofibrosis	22110671	CNVD
Cancer	21183584	CNVD
Colorectal cancer	20459617	CNVD
Ductal carcinoma	22052326	CNVD
Cancer	20164920	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Melanoma	20877625	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:3363 , 50 per page) page: 1 2 3 4 5 6 7 ... 68

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:23468600-23492600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr19:23477600-23478000	Active TSS	Brain Substantia Nigra	brain
3	chr19:23485200-23486400	ZNF genes & repeats	Dnd41	blood
4	chr19:23486200-23490000	Weak transcription	Placenta	Placenta
5	chr19:23486400-23486800	Flanking Active TSS	Dnd41	blood
6	chr19:23486400-23508000	Weak transcription	Ovary	ovary
7	chr19:23488200-23489800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr19:23488200-23490000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
9	chr19:23488600-23491000	Weak transcription	Skeletal Muscle Female	skeletal muscle
10	chr19:23488800-23490400	Weak transcription	Left Ventricle	heart
11	chr19:23489200-23491200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
12	chr19:23489400-23492800	Weak transcription	Fetal Muscle Trunk	muscle
13	chr19:23489800-23490400	ZNF genes & repeats	Pancreatic Islets	Pancreatic Islet
14	chr19:23489800-23492400	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
15	chr19:23489800-23498200	Weak transcription	Aorta	Aorta
16	chr19:23490000-23491800	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
17	chr19:23490000-23491800	Strong transcription	Placenta	Placenta
18	chr19:23490000-23493400	Weak transcription	Brain Anterior Caudate	brain
19	chr19:23490000-23514200	Weak transcription	Stomach Smooth Muscle	stomach
20	chr19:23490200-23491600	ZNF genes & repeats	Fetal Brain Female	brain
21	chr19:23490400-23491400	Strong transcription	Pancreatic Islets	Pancreatic Islet
22	chr19:23490400-23491800	Strong transcription	Left Ventricle	heart
23	chr19:23490400-23500800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
24	chr19:23490600-23491800	ZNF genes & repeats	Brain Germinal Matrix	brain
25	chr19:23491000-23491800	Strong transcription	Skeletal Muscle Female	skeletal muscle
26	chr19:23491200-23492000	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
27	chr19:23491400-23493200	Weak transcription	Pancreatic Islets	Pancreatic Islet
28	chr19:23491800-23493400	Weak transcription	Placenta	Placenta
29	chr19:23491800-23493400	Weak transcription	Skeletal Muscle Female	skeletal muscle
30	chr19:23491800-23508400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
31	chr19:23491800-23512800	Weak transcription	Left Ventricle	heart
32	chr19:23492000-23493600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
33	chr19:23492400-23502600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
34	chr19:23492600-23493600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
35	chr19:23493400-23499800	Enhancers	Placenta	Placenta
36	chr19:23493600-23494800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
37	chr19:23494200-23494400	Enhancers	Placenta Amnion	Placenta Amnion
38	chr19:23494400-23518200	Weak transcription	Placenta Amnion	Placenta Amnion
39	chr19:23494800-23496600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
40	chr19:23496600-23512200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
41	chr19:23496800-23498400	ZNF genes & repeats	Fetal Brain Female	brain
42	chr19:23499800-23500800	Weak transcription	Placenta	Placenta
43	chr19:23500400-23516600	Weak transcription	Right Ventricle	heart
44	chr19:23500800-23501000	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast
45	chr19:23500800-23505800	Enhancers	Placenta	Placenta
46	chr19:23501000-23501800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
47	chr19:23501200-23512600	Weak transcription	Brain Cingulate Gyrus	brain
48	chr19:23502600-23503000	ZNF genes & repeats	H9 Derived Neuron Cultured Cells	ES cell derived
49	chr19:23503000-23503400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
50	chr19:23504200-23507800	Weak transcription	Aorta	Aorta

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