Variant report

Variant	esv3382429
Chromosome Location	chr17:45247350-45249332
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:229)
CpG islands
(count:0)
Chromatin interactive
region (count:2)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:229 , 50 per page) page: 1 2 3 4 5

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF1	chr17:45249115-45249522	K562	blood:	n/a	n/a
2	ATF3	chr17:45249238-45249371	K562	blood:	n/a	n/a
3	BACH1	chr17:45249113-45249530	K562	blood:	n/a	n/a
4	BCL3	chr17:45249209-45249491	GM12878	blood:	n/a	n/a
5	BHLHE40	chr17:45247205-45247577	K562	blood:	n/a	n/a
6	BRCA1	chr17:45247204-45247519	Hela-S3	cervix:	n/a	n/a
7	BRCA1	chr17:45249109-45249530	Hela-S3	cervix:	n/a	n/a
8	BRCA1	chr17:45249114-45249534	GM12878	blood:	n/a	n/a
9	BRCA1	chr17:45247141-45247518	GM12878	blood:	n/a	n/a
10	BRF2	chr17:45249141-45249524	Hela-S3	cervix:	n/a	n/a
11	CEBPB	chr17:45249135-45249516	HepG2	liver:	n/a	chr17:45249301-45249312
12	CEBPB	chr17:45247144-45247579	K562	blood:	n/a	n/a
13	CEBPB	chr17:45249109-45249528	K562	blood:	n/a	chr17:45249301-45249312
14	CEBPB	chr17:45249111-45249526	Hela-S3	cervix:	n/a	chr17:45249301-45249312
15	CHD2	chr17:45249129-45249530	K562	blood:	n/a	n/a
16	CTCF	chr17:45247280-45247430	HRPEpiC	eye:	n/a	n/a
17	CTCF	chr17:45249200-45249350	Hela-S3	cervix:	n/a	n/a
18	CTCF	chr17:45249243-45249347	GM19239	blood:	n/a	n/a
19	CTCF	chr17:45249260-45249410	AoAF	blood vessel:	n/a	n/a
20	CTCF	chr17:45249220-45249370	MCF-7	breast:	n/a	n/a
21	CTCF	chr17:45249240-45249390	HA-sp	spinal cord:	n/a	n/a
22	CTCF	chr17:45249220-45249370	HAc	cerebellar:	n/a	n/a
23	CTCF	chr17:45249220-45249370	AG10803	skin:	n/a	n/a
24	CTCF	chr17:45249225-45249322	GM12878	blood:	n/a	n/a
25	CTCF	chr17:45249220-45249370	NHDF-neo	bronchial:	n/a	n/a
26	CTCF	chr17:45249200-45249350	HPF	lung:	n/a	n/a
27	CTCF	chr17:45249200-45249350	HMEC	breast:	n/a	n/a
28	CTCF	chr17:45249220-45249370	GM12873	blood:	n/a	n/a
29	CTCF	chr17:45249302-45249325	Hela-S3	cervix:	n/a	n/a
30	CTCF	chr17:45249200-45249350	GM06990	blood:	n/a	n/a
31	CTCF	chr17:45249295-45249380	Kidney_OC	kidney:	n/a	n/a
32	CTCF	chr17:45249260-45249410	GM12864	blood:	n/a	n/a
33	CTCF	chr17:45249220-45249370	HA-sp	spinal cord:	n/a	n/a
34	CTCF	chr17:45249200-45249350	AG04449	skin:	n/a	n/a
35	CTCF	chr17:45249200-45249350	HEEpiC	esophagus:	n/a	n/a
36	CTCF	chr17:45249260-45249410	GM12875	blood:	n/a	n/a
37	CTCF	chr17:45249229-45249391	Spleen_OC	spleen:	n/a	n/a
38	CTCF	chr17:45249180-45249330	HMF	breast:	n/a	n/a
39	CTCF	chr17:45249200-45249350	HL-60	blood:	n/a	n/a
40	CTCF	chr17:45249220-45249370	BE2_C	brain:	n/a	n/a
41	CTCF	chr17:45249220-45249370	GM12865	blood:	n/a	n/a
42	CTCF	chr17:45249180-45249330	AG09319	gingival:	n/a	n/a
43	CTCF	chr17:45249220-45249370	HCPEpiC	choroid plexus:	n/a	n/a
44	CTCF	chr17:45249200-45249350	HBMEC	blood vessel:	n/a	n/a
45	CTCF	chr17:45249251-45249417	GM13976	blood:	n/a	n/a
46	CTCF	chr17:45249260-45249410	HPF	lung:	n/a	n/a
47	CTCF	chr17:45249300-45249450	HRE	kidney:	n/a	n/a
48	CTCF	chr17:45249220-45249370	HFF-Myc	foreskin:	n/a	n/a
49	CTCF	chr17:45247260-45247410	GM12866	blood:	n/a	n/a
50	CTCF	chr17:45249200-45249350	GM12873	blood:	n/a	n/a

No data

(count:2 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr17:45247336..45250133-chr17:45265157..45267526,3	MCF-7	breast:
2	chr17:45248819..45249322-chr2:133018957..133019458,2	MCF-7	breast:

No data

Variant related genes	Relation type
CDC27	TF binding region
ENSG00000004897	chromatin interactions

Extended variants
information (count: 57 )
Associated
traits (count: 120 )

Variant overlapped rSNPs/rCNVs (count:57 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs77113847	chr17:45247351-45247352	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Active TSS Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
2	rs73319503	chr17:45247362-45247363	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Active TSS Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs201141157	chr17:45247367-45247368	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Active TSS Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs75239352	chr17:45247381-45247382	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Active TSS Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
5	rs371549435	chr17:45247382-45247383	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Active TSS Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs79348596	chr17:45247393-45247394	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Active TSS Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs199782161	chr17:45247401-45247402	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Active TSS Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
8	rs78111769	chr17:45247409-45247410	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Active TSS Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs187418928	chr17:45247441-45247442	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Active TSS Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
10	rs368080491	chr17:45247445-45247446	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Active TSS Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
11	rs567915713	chr17:45247488-45247489	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Active TSS Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
12	rs11570475	chr17:45247506-45247507	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Active TSS Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
13	rs371871974	chr17:45247516-45247517	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Active TSS Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
14	rs557070711	chr17:45247517-45247518	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Active TSS Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs546405897	chr17:45247519-45247520	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Active TSS Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
16	rs191480947	chr17:45247553-45247554	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Active TSS Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs545908863	chr17:45247566-45247567	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Active TSS Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
18	rs11570473	chr17:45247589-45247590	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Active TSS Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs139584150	chr17:45247611-45247612	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs542552056	chr17:45247642-45247643	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs11570472	chr17:45247643-45247644	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs531178736	chr17:45247650-45247651	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs201599370	chr17:45247696-45247697	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs181658554	chr17:45247729-45247730	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs74885629	chr17:45247761-45247762	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs77618938	chr17:45247762-45247763	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs76389918	chr17:45247763-45247764	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs112230628	chr17:45247859-45247860	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs11570471	chr17:45247871-45247872	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs11570470	chr17:45247872-45247873	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs565678808	chr17:45247884-45247885	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs528327756	chr17:45248049-45248050	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs11570469	chr17:45248189-45248190	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
34	rs567902964	chr17:45248204-45248205	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs11570468	chr17:45248292-45248293	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
36	rs550636646	chr17:45248323-45248324	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs570831555	chr17:45248339-45248340	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs539940160	chr17:45248347-45248348	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs11570467	chr17:45248358-45248359	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs561980251	chr17:45248382-45248383	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs528818255	chr17:45248472-45248473	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs573195309	chr17:45248568-45248569	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs536153873	chr17:45248679-45248680	Weak transcription Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
44	rs540922513	chr17:45248931-45248932	Weak transcription Strong transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
45	rs190362959	chr17:45249024-45249025	Weak transcription Strong transcription ZNF genes & repeats Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
46	rs200397153	chr17:45249036-45249037	Weak transcription Strong transcription ZNF genes & repeats Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
47	rs377001795	chr17:45249044-45249045	Weak transcription Strong transcription ZNF genes & repeats Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
48	rs544791770	chr17:45249108-45249109	Weak transcription Strong transcription ZNF genes & repeats Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
49	rs529672180	chr17:45249120-45249121	Weak transcription Strong transcription ZNF genes & repeats Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
50	rs548328207	chr17:45249157-45249158	Weak transcription Strong transcription ZNF genes & repeats Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:120)

Disease	PMID	Source
Ewing''s sarcoma	21437220	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	21080181	CNVD
Ovarian cancer	22174824	CNVD
Melanoma	18172304	CNVD
Moyamoya disease	22323933	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Ovarian cancer	21781307	CNVD
Colorectal cancer	21645411	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Medulloblastoma	21979893	CNVD
Cancer	20164919	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Hodgkin''s lymphoma	17606441	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell lymphomas	19863542	CNVD
Cancer	16751803	CNVD
Chordoma	21602918	CNVD
Neurofibromatosis	20686819	CNVD
Peripheral nerve sheath tumors	20686819	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Cancer	21499728	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Medulloblastoma	21292688	CNVD
Neuroblastoma	18923524	CNVD
Neuroblastoma	17897457	CNVD
Neuroblastoma	17327916	CNVD
Breast cancer	21264507	CNVD
Endometrial cancer	22040021	CNVD
Neuroblastoma	21484798	CNVD
Breast cancer	22028636	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Acute myeloid leukemia	20724749	CNVD
Breast cancer	21858162	CNVD
lymphocytic leukemia	21291569	CNVD
Gastric cancer	17167181	CNVD
Breast cancer	19287154	CNVD
Leukemia	20874852	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Neuroblastoma	18664255	CNVD
Neuroblastoma	17533364	CNVD
Human rectal carcinomas	16397240	CNVD
Metanephric adenoma	20802469	CNVD
Breast cancer	16608533	CNVD
Breast cancer	17457667	CNVD
Breast cancer	16951389	CNVD
Basal cell lymphoma	17053054	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	22048815	CNVD
Breast cancer	17603634	CNVD
Follicular lymphoma	20505157	CNVD
Non-small cell lung cancer	20864512	CNVD
Cancer	21183584	CNVD
Cervical cancer	21062161	CNVD
Breast cancer	20953835	CNVD
Thyroid cancer	19087340	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Hirschsprung''s Disease	21712996	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
TAR Syndrome	17847015	CNVD
Neuroblastoma	18923191	CNVD
Breast cancer	17850661	CNVD
Breast cancer	19261255	CNVD
Lung cancer	16773561	CNVD
Neurocytoma	17123091	CNVD
Central neurocytomas	17123091	CNVD
Basal-like breast cancer	18066063	CNVD
Breast cancer	20031965	CNVD
Colorectal cancer	19287155	CNVD
Hereditary breast	19566914	CNVD
Ovarian cancer	19047089	CNVD
Ovarian cancer	19566914	CNVD
Triple-negative breast cancer	18950515	CNVD
Breast cancer	16846527	CNVD
Bladder cancer	21909424	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Ewing''s sarcoma	18628472	CNVD
Glioblastoma multiforme	18628472	CNVD
Leukemia	18628472	CNVD
Acute myeloid leukemia	21251322	CNVD
Ewing''s sarcoma	22429812	CNVD
Prostate cancer	18632612	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21364760	CNVD
Breast cancer	21509527	CNVD
Urothelial carcinoma	21177765	CNVD
Adenoid cystic carcinoma	18332873	CNVD
Breast cancer	17142309	CNVD
Breast cancer	16397240	CNVD
Ovarian clear cell carcinoma	19293255	CNVD
Myelofibrosis	22110671	CNVD
Prostate cancer	17217626	CNVD
Non-syndromic sensorineural hearing loss	21084979	CNVD
Autism	22817714	CNVD
Breast cancer	20409316	CNVD
Cancer	17160897	CNVD
Frontotemporal lobar degeneration	19640594	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:361 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:45234600-45249200	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr17:45234600-45249400	Strong transcription	A549	lung
3	chr17:45235800-45247400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
4	chr17:45235800-45247400	Weak transcription	Psoas Muscle	Psoas
5	chr17:45235800-45247800	Strong transcription	Breast Myoepithelial Primary Cells	Breast
6	chr17:45235800-45249200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
7	chr17:45235800-45249200	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr17:45235800-45249200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
9	chr17:45235800-45249200	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr17:45235800-45249200	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
11	chr17:45235800-45249200	Weak transcription	Skeletal Muscle Female	skeletal muscle
12	chr17:45235800-45249200	Weak transcription	Stomach Mucosa	stomach
13	chr17:45235800-45249200	Weak transcription	HSMMtube	muscle
14	chr17:45237400-45249200	Weak transcription	Aorta	Aorta
15	chr17:45237400-45249200	Weak transcription	Small Intestine	intestine
16	chr17:45237800-45247600	Strong transcription	K562	blood
17	chr17:45239000-45249200	Weak transcription	Right Ventricle	heart
18	chr17:45239200-45249200	Weak transcription	Brain Angular Gyrus	brain
19	chr17:45240800-45248400	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
20	chr17:45241000-45248400	Strong transcription	Osteobl	bone
21	chr17:45241000-45249200	Strong transcription	Monocytes-CD14+_RO01746	blood
22	chr17:45241200-45247600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
23	chr17:45241400-45248400	Strong transcription	Fetal Intestine Large	intestine
24	chr17:45241400-45248800	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
25	chr17:45241600-45247400	Strong transcription	Primary B cells from peripheral blood	blood
26	chr17:45241600-45247600	Strong transcription	Primary T cells fromperipheralblood	blood
27	chr17:45241600-45248200	Strong transcription	NHDF-Ad	bronchial
28	chr17:45242200-45249200	Weak transcription	Right Atrium	heart
29	chr17:45242400-45249200	Weak transcription	Placenta Amnion	Placenta Amnion
30	chr17:45244200-45248400	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
31	chr17:45244200-45248400	Strong transcription	Fetal Stomach	stomach
32	chr17:45244600-45248400	Strong transcription	Primary T helper cells fromperipheralblood	blood
33	chr17:45245000-45247600	Strong transcription	Primary T helper naive cells from peripheral blood	blood
34	chr17:45245000-45248400	Strong transcription	Cortex derived primary cultured neurospheres	brain
35	chr17:45245000-45248400	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin
36	chr17:45245000-45248400	Strong transcription	Hela-S3	cervix
37	chr17:45245800-45249200	Weak transcription	Esophagus	oesophagus
38	chr17:45245800-45249200	Weak transcription	Ovary	ovary
39	chr17:45246400-45251600	Weak transcription	Fetal Brain Female	brain
40	chr17:45246600-45251600	Weak transcription	Brain Germinal Matrix	brain
41	chr17:45246800-45247600	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
42	chr17:45246800-45247800	Genic enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
43	chr17:45246800-45249200	Weak transcription	Placenta	Placenta
44	chr17:45246800-45249200	Weak transcription	Lung	lung
45	chr17:45246800-45251200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
46	chr17:45246800-45254400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
47	chr17:45247000-45247400	Weak transcription	Sigmoid Colon	Sigmoid Colon
48	chr17:45247000-45247800	Genic enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
49	chr17:45247000-45248600	Strong transcription	NHLF	lung
50	chr17:45247000-45249200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

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