Variant report

Variant	esv3384280
Chromosome Location	chr11:9766350-9911228
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2882)
CpG islands
(count:1465)
Chromatin interactive
region (count:62)
LncRNA
region (count:31)
Mature miRNA
region (count: 0)
miRNA target
sites (count:4)

(count:2882 , 50 per page) page: 1 2 3 4 5 6 7 ... 58

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr11:9878803-9879143	HepG2	liver:	n/a	n/a
2	ARID3A	chr11:9780344-9780442	HepG2	liver:	n/a	n/a
3	ARID3A	chr11:9812132-9812964	K562	blood:	n/a	n/a
4	ARID3A	chr11:9780552-9780644	K562	blood:	n/a	n/a
5	ARID3A	chr11:9787070-9787383	HepG2	liver:	n/a	n/a
6	ARID3A	chr11:9883748-9884013	HepG2	liver:	n/a	n/a
7	ARID3A	chr11:9883755-9884076	K562	blood:	n/a	n/a
8	ARID3A	chr11:9781323-9781523	HepG2	liver:	n/a	n/a
9	ARID3A	chr11:9774377-9774720	HepG2	liver:	n/a	n/a
10	ARID3A	chr11:9897927-9898136	K562	blood:	n/a	n/a
11	ARID3A	chr11:9813410-9813712	K562	blood:	n/a	n/a
12	ARID3A	chr11:9779865-9780126	HepG2	liver:	n/a	n/a
13	ARID3A	chr11:9770143-9770155	K562	blood:	n/a	n/a
14	ATF1	chr11:9806235-9806459	K562	blood:	n/a	n/a
15	ATF1	chr11:9880493-9880632	K562	blood:	n/a	n/a
16	ATF1	chr11:9813660-9813827	K562	blood:	n/a	n/a
17	ATF1	chr11:9789728-9789851	K562	blood:	n/a	n/a
18	ATF1	chr11:9772767-9772773	K562	blood:	n/a	n/a
19	ATF1	chr11:9897920-9898187	K562	blood:	n/a	n/a
20	ATF2	chr11:9770014-9770432	H1-hESC	embryonic stem cell:	n/a	n/a
21	ATF2	chr11:9781153-9781596	GM12878	blood:	n/a	n/a
22	ATF2	chr11:9769988-9770378	GM12878	blood:	n/a	n/a
23	ATF2	chr11:9779228-9779803	GM12878	blood:	n/a	n/a
24	ATF2	chr11:9781214-9781569	GM12878	blood:	n/a	n/a
25	ATF2	chr11:9860350-9860911	GM12878	blood:	n/a	n/a
26	ATF2	chr11:9766784-9767675	GM12878	blood:	n/a	n/a
27	ATF2	chr11:9775325-9775760	H1-hESC	embryonic stem cell:	n/a	n/a
28	ATF3	chr11:9781198-9781567	K562	blood:	n/a	n/a
29	ATF3	chr11:9780839-9781519	A549	lung:	n/a	n/a
30	ATF3	chr11:9769918-9770464	A549	lung:	n/a	n/a
31	ATF3	chr11:9813470-9813774	K562	blood:	n/a	n/a
32	ATF3	chr11:9781038-9781575	A549	lung:	n/a	n/a
33	ATF3	chr11:9897994-9898182	K562	blood:	n/a	n/a
34	BACH1	chr11:9779470-9780228	H1-hESC	embryonic stem cell:	n/a	n/a
35	BACH1	chr11:9779522-9779523	K562	blood:	n/a	n/a
36	BACH1	chr11:9770003-9770331	H1-hESC	embryonic stem cell:	n/a	n/a
37	BATF	chr11:9860392-9860752	GM12878	blood:	n/a	n/a
38	BATF	chr11:9766896-9767467	GM12878	blood:	n/a	n/a
39	BATF	chr11:9860401-9860780	GM12878	blood:	n/a	n/a
40	BATF	chr11:9766903-9767519	GM12878	blood:	n/a	n/a
41	BATF	chr11:9781165-9781629	GM12878	blood:	n/a	chr11:9781420-9781430 chr11:9781419-9781430
42	BCL11A	chr11:9860414-9860736	GM12878	blood:	n/a	chr11:9860433-9860442
43	BCL11A	chr11:9766925-9767259	GM12878	blood:	n/a	n/a
44	BCL11A	chr11:9860463-9860683	GM12878	blood:	n/a	n/a
45	BCL11A	chr11:9767262-9767488	GM12878	blood:	n/a	n/a
46	BCL11A	chr11:9766946-9767537	GM12878	blood:	n/a	n/a
47	BCL3	chr11:9780791-9781753	A549	lung:	n/a	chr11:9781418-9781427
48	BCL3	chr11:9781158-9781605	GM12878	blood:	n/a	chr11:9781418-9781427
49	BCL3	chr11:9780935-9781810	A549	lung:	n/a	chr11:9781753-9781766 chr11:9781418-9781427
50	BCL3	chr11:9779174-9780784	A549	lung:	n/a	n/a

(count:1465 , 50 per page) page: 1 2 3 4 5 6 7 ... 30

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr11:9907493-9907543	MCF-7	breast:	n/a
2	chr11:9907493-9907543	MCF-7	breast:	n/a
3	chr11:9787121-9787171	PFSK-1	brain:	n/a
4	chr11:9780133-9780183	SK-N-SH_RA	brain:	n/a
5	chr11:9897069-9897119	HEK293	kidney:	embryo
6	chr11:9775858-9775908	HCF	heart:	n/a
7	chr11:9781826-9781876	HL-60	blood:	n/a
8	chr11:9780133-9780183	HepG2	liver:	n/a
9	chr11:9779714-9779764	A549	lung:	n/a
10	chr11:9801439-9801489	NH-A	brain:	n/a
11	chr11:9787121-9787171	Hepatocyte	liver:	n/a
12	chr11:9783215-9783265	HUVEC	blood vessel:	n/a
13	chr11:9772285-9772335	BE2_C	brain:	n/a
14	chr11:9780133-9780183	ECC-1	luminal epithelium:	n/a
15	chr11:9824185-9824235	HNPCEpiC	eye:	n/a
16	chr11:9907493-9907543	AG10803	skin:	n/a
17	chr11:9772285-9772335	U87	brain:	n/a
18	chr11:9775858-9775908	HRE	kidney:	n/a
19	chr11:9778721-9778771	HL-60	blood:	n/a
20	chr11:9837208-9837258	HMEC	breast:	n/a
21	chr11:9884649-9884699	MCF-7	breast:	n/a
22	chr11:9779593-9779643	BJ	skin:	n/a
23	chr11:9769192-9769242	AG10803	skin:	n/a
24	chr11:9769192-9769242	AG04449	skin:	fetal
25	chr11:9781412-9781462	ProgFib	skin:	n/a
26	chr11:9880619-9880669	HIPEpiC	eye:	n/a
27	chr11:9824185-9824235	Hepatocyte	liver:	n/a
28	chr11:9842577-9842627	HRE	kidney:	n/a
29	chr11:9801439-9801489	H1-hESC	embryonic stem cell:	embryo
30	chr11:9860910-9860960	PFSK-1	brain:	n/a
31	chr11:9779714-9779764	HEEpiC	esophagus:	n/a
32	chr11:9775858-9775908	HPAEpiC	pulmonary alveolar:	n/a
33	chr11:9780844-9780894	SK-N-SH_RA	brain:	n/a
34	chr11:9880619-9880669	ProgFib	skin:	n/a
35	chr11:9781826-9781876	HPAEpiC	pulmonary alveolar:	n/a
36	chr11:9781826-9781876	RPTEC	kidney:	n/a
37	chr11:9775858-9775908	SK-N-SH_RA	brain:	n/a
38	chr11:9810051-9810101	HL-60	blood:	n/a
39	chr11:9787121-9787171	LNCaP	prostate:	n/a
40	chr11:9783215-9783265	AG09309	skin:	n/a
41	chr11:9772285-9772335	Jurkat	blood:	n/a
42	chr11:9780844-9780894	K562	blood:	n/a
43	chr11:9824185-9824235	AG04450	lung:	fetal
44	chr11:9837208-9837258	PFSK-1	brain:	n/a
45	chr11:9778721-9778771	HEK293	kidney:	embryo
46	chr11:9769192-9769242	HCF	heart:	n/a
47	chr11:9781412-9781462	GM19239	blood:	n/a
48	chr11:9879023-9879073	HNPCEpiC	eye:	n/a
49	chr11:9780844-9780894	HPAEpiC	pulmonary alveolar:	n/a
50	chr11:9880619-9880669	HNPCEpiC	eye:	n/a

(count:62 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr11:9773431..9775372-chr11:9777677..9779638,2	K562	blood:
2	chr11:9783060..9784913-chr11:9787043..9789186,2	MCF-7	breast:
3	chr11:9822472..9825243-chr11:9829711..9832940,3	MCF-7	breast:
4	chr11:9634372..9636251-chr11:9769619..9770984,14	MCF-7	breast:
5	chr11:9807314..9809632-chr11:10328158..10330110,2	K562	blood:
6	chr11:9780371..9782120-chr11:9786518..9788356,2	MCF-7	breast:
7	chr11:9780866..9785648-chr11:9787509..9790769,4	K562	blood:
8	chr11:9779490..9780399-chr17:27224168..27225092,2	Hela-S3	cervix:
9	chr11:9901256..9903580-chr11:9906386..9907985,2	MCF-7	breast:
10	chr11:9837195..9840045-chr11:9851275..9853158,2	K562	blood:
11	chr11:9837195..9840045-chr11:9851275..9853158,2	K562	blood:
12	chr11:9774053..9775652-chr11:9775984..9777697,2	MCF-7	breast:
13	chr11:9868824..9871415-chr11:9878281..9879857,2	MCF-7	breast:
14	chr11:9594244..9596039-chr11:9777459..9779743,2	MCF-7	breast:
15	chr11:9901256..9903580-chr11:9906386..9907985,2	MCF-7	breast:
16	chr11:9773431..9776316-chr11:9777677..9779608,2	K562	blood:
17	chr11:9780268..9785648-chr11:9787366..9790238,5	K562	blood:
18	chr11:9481460..9483596-chr11:9780067..9782132,2	K562	blood:
19	chr11:9844266..9846481-chr11:9866662..9869256,2	MCF-7	breast:
20	chr11:9759666..9763371-chr11:9766657..9768623,3	K562	blood:
21	chr11:9405010..9406723-chr11:9771415..9773442,2	MCF-7	breast:
22	chr11:9780076..9783440-chr11:9887895..9890537,3	MCF-7	breast:
23	chr11:9589955..9591769-chr11:9771252..9773790,2	MCF-7	breast:
24	chr11:9777757..9779600-chr11:10325814..10328384,2	MCF-7	breast:
25	chr11:9526683..9529040-chr11:9771305..9773861,2	K562	blood:
26	chr11:9772436..9774633-chr11:9780088..9782581,2	K562	blood:
27	chr11:9773431..9775372-chr11:9777677..9779638,2	K562	blood:
28	chr11:9628715..9629243-chr11:9769841..9770445,2	MCF-7	breast:
29	chr11:9779384..9779925-chr11:9883445..9884291,2	K562	blood:
30	chr11:9775646..9777707-chr11:9778312..9780698,2	MCF-7	breast:
31	chr11:9868824..9871415-chr11:9878281..9879857,2	MCF-7	breast:
32	chr11:9759666..9763532-chr11:9766394..9768623,4	K562	blood:
33	chr11:9807438..9810264-chr11:10314419..10316538,2	MCF-7	breast:
34	chr11:9773431..9776316-chr11:9777677..9779608,2	K562	blood:
35	chr11:9634807..9636345-chr11:9769633..9770231,4	K562	blood:
36	chr11:9481642..9483596-chr11:9779160..9782132,2	K562	blood:
37	chr11:9833892..9835650-chr11:9836412..9839137,2	K562	blood:
38	chr11:9779693..9780502-chr19:59086540..59087364,2	HCT-116	colon:
39	chr11:9813836..9815501-chr11:9816668..9819213,3	K562	blood:
40	chr11:9777333..9782154-chr11:10324598..10331360,10	MCF-7	breast:
41	chr11:9779761..9781749-chr11:9784316..9786862,4	K562	blood:
42	chr11:9844266..9846481-chr11:9866662..9869256,2	MCF-7	breast:
43	chr11:9634169..9637157-chr11:9770583..9773571,2	MCF-7	breast:
44	chr11:9783060..9784913-chr11:9787043..9789186,2	MCF-7	breast:
45	chr11:9878394..9880153-chr11:10314990..10317190,2	K562	blood:
46	chr11:9849633..9851299-chr11:9859618..9861347,2	K562	blood:
47	chr11:9813400..9815495-chr11:9817241..9820398,3	K562	blood:
48	chr11:9683816..9686109-chr11:9781623..9784319,2	MCF-7	breast:
49	chr11:9634797..9636840-chr11:9770227..9772919,2	MCF-7	breast:
50	chr11:9774053..9775652-chr11:9775984..9777697,2	MCF-7	breast:

(count:31 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-SBF2-3	chr11:9784522-9785209	NONHSAT017942
2	lnc-SBF2-2	chr11:9776676-9778445	ENSG00000245522
3	lnc-SWAP70-1	chr11:9829395-9829926	ENSG00000246273
4	lnc-WEE1-3	chr11:9766574-9768012	NONHSAT017934
5	lnc-SWAP70-1	chr11:9801923-9802052	NONHSAT017945
6	lnc-SBF2-2	chr11:9786904-9787083	XLOC_009371
7	lnc-SBF2-2	chr11:9780976-9781080	ENSG00000245522
8	lnc-SWAP70-1	chr11:9800694-9801489	NONHSAT017945
9	lnc-SWAP70-4	chr11:9785967-9786486	predAs_chen_BG207485_1
10	lnc-SWAP70-1	chr11:9800906-9802122	NONHSAT017946
11	lnc-SWAP70-1	chr11:9804587-9804656	ENSG00000246273
12	lnc-SWAP70-1	chr11:9779841-9780050	ENSG00000246273
13	lnc-SBF2-2	chr11:9779314-9779711	ENSG00000245522
14	lnc-SWAP70-1	chr11:9806155-9806323	NONHSAT017950
15	lnc-SBF2-2	chr11:9779314-9779392	XLOC_009371
16	lnc-SBF2-2	chr11:9778138-9778445	XLOC_009371
17	lnc-SWAP70-2	chr11:9860690-9860823	ENSG00000255476.1
18	lnc-SBF2-2	chr11:9779314-9779390	XLOC_009371
19	lnc-SBF2-2	chr11:9778117-9778445	XLOC_009371
20	lnc-SBF2-2	chr11:9779314-9779390	ENSG00000245522
21	lnc-SBF2-2	chr11:9776104-9777930	XLOC_009371
22	lnc-SWAP70-1	chr11:9829395-9829875	NONHSAT017946
23	lnc-SWAP70-1	chr11:9797278-9797312	ENSG00000246273
24	lnc-SWAP70-1	chr11:9829395-9829902	NONHSAT017950
25	lnc-SWAP70-1	chr11:9801923-9802122	ENSG00000246273
26	lnc-SBF2-3	chr11:9782514-9782682	NONHSAT017942
27	lnc-SWAP70-1	chr11:9812416-9812791	ENSG00000246273
28	lnc-SBF2-2	chr11:9776317-9778445	ENSG00000245522
29	lnc-SWAP70-1	chr11:9779843-9780050	ENSG00000246273
30	lnc-SWAP70-1	chr11:9801923-9802122	ENSG00000246273
31	lnc-SWAP70-1	chr11:9801923-9802378	ENSG00000246273

No data

(count:4 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location
1	SWAP70	hsa-miR-145-5p	chr11:9773228-9773250
2	SBF2	hsa-miR-335-5p	chr11:9860188-9860210
3	SWAP70	hsa-miR-124-3p	chr11:9773407-9773426
4	SWAP70	hsa-miR-145-5p	chr11:9773243-9773250

Variant related genes	Relation type
ENSG00000245522	TF binding region
ENSG00000255476	TF binding region
SBF2	TF binding region
RNU7-28P	TF binding region
SBF2-AS1	TF binding region
ENSG00000245522	CpG island
ENSG00000255476	CpG island
SBF2	CpG island
RNU7-28P	CpG island
SBF2-AS1	CpG island
ENSG00000167840	chromatin interactions
ENSG00000133805	chromatin interactions
ENSG00000205339	chromatin interactions
ENSG00000133789	chromatin interactions
ENSG00000234327	chromatin interactions
ENSG00000254554	chromatin interactions
ENSG00000132589	chromatin interactions
ENSG00000166483	chromatin interactions
ENSG00000133812	chromatin interactions
ENSG00000246273	chromatin interactions
ENSG00000266642	chromatin interactions
ENSG00000255476	chromatin interactions
ENSG00000213753	chromatin interactions
ENSG00000245522	chromatin interactions
ENSG00000166478	chromatin interactions
ENSG00000268403	chromatin interactions
ENSG00000148926	chromatin interactions
DNMT3A	miRNA target sites
SFRP2	miRNA target sites
YTHDC2	miRNA target sites
ARHGEF6	miRNA target sites
MAP7	miRNA target sites
SFXN1	miRNA target sites
CPEB3	miRNA target sites
SFMBT1	miRNA target sites
CLIC4	miRNA target sites
SLC9A1	miRNA target sites
WBP2	miRNA target sites
FGA	miRNA target sites
SF3B3	miRNA target sites
RAB1A	miRNA target sites

Extended variants
information (count: 5721 )
Associated
traits (count: 61 )

Variant overlapped rSNPs/rCNVs (count:5721 , 50 per page) page: 1 2 3 4 5 6 7 ... 115

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs61284089	chr11:9766359-9766360	Weak transcription Strong transcription Enhancers Genic enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs185848855	chr11:9766411-9766412	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs576915597	chr11:9766432-9766433	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs75722201	chr11:9766433-9766434	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs189112989	chr11:9766459-9766460	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs370812234	chr11:9766465-9766466	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs538808105	chr11:9766524-9766525	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs60929104	chr11:9766544-9766545	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
9	rs191403655	chr11:9766574-9766575	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
10	rs562376466	chr11:9766582-9766583	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
11	rs57650149	chr11:9766608-9766609	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
12	rs58765157	chr11:9766613-9766614	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
13	rs147016567	chr11:9766683-9766684	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
14	rs60544361	chr11:9766693-9766694	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs546741252	chr11:9766715-9766716	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
16	rs543839468	chr11:9766733-9766734	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
17	rs148052075	chr11:9766756-9766757	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
18	rs60601382	chr11:9766763-9766764	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
19	rs549592665	chr11:9766765-9766766	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
20	rs373078671	chr11:9766796-9766797	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
21	rs118025449	chr11:9766804-9766805	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
22	rs368869484	chr11:9766864-9766865	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
23	rs183709539	chr11:9766870-9766871	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
24	rs577533590	chr11:9766885-9766886	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
25	rs533806686	chr11:9766899-9766900	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
26	rs188418728	chr11:9766908-9766909	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
27	rs378825	chr11:9766932-9766933	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
28	rs140848612	chr11:9766944-9766945	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
29	rs559481367	chr11:9766964-9766965	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
30	rs528311742	chr11:9766980-9766981	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
31	rs76796939	chr11:9767011-9767012	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
32	rs74895871	chr11:9767038-9767039	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
33	rs544860077	chr11:9767093-9767094	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
34	rs564849621	chr11:9767131-9767132	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
35	rs181238843	chr11:9767239-9767240	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
36	rs546948753	chr11:9767241-9767242	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
37	rs530379850	chr11:9767242-9767243	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
38	rs560327808	chr11:9767257-9767258	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
39	rs186539186	chr11:9767286-9767287	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
40	rs190416547	chr11:9767291-9767292	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
41	rs150134760	chr11:9767302-9767303	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
42	rs182047936	chr11:9767303-9767304	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
43	rs138556891	chr11:9767337-9767338	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
44	rs571888496	chr11:9767349-9767350	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
45	rs141626565	chr11:9767352-9767353	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
46	rs553719050	chr11:9767439-9767440	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS	lncRNA	n/a	Overlapped CNVs	n/a
47	rs573602013	chr11:9767440-9767441	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS	lncRNA	n/a	Overlapped CNVs	n/a
48	rs535895604	chr11:9767457-9767458	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS	lncRNA	n/a	Overlapped CNVs	n/a
49	rs146198517	chr11:9767466-9767467	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS	lncRNA	n/a	Overlapped CNVs	n/a
50	rs116552382	chr11:9767473-9767474	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS	lncRNA	n/a	Overlapped CNVs	n/a

Variant related diseases (count:61)

Disease	PMID	Source
Neuroblastoma	18923191	CNVD
Breast cancer	19432969	CNVD
Alzheimer''s disease	17576883	CNVD
Long-qt syndrome	17576883	CNVD
Emphysema	19352772	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Chordoma	18071362	CNVD
Breast cancer	16608533	CNVD
Cancer	21183584	CNVD
Gastric adenocarcinoma	19115996	CNVD
Hepatocellular carcinoma	16750200	CNVD
Burkitt''s lymphoma	19759907	CNVD
Breast cancer	17603634	CNVD
Medulloblastoma	21979893	CNVD
Thyroid cancer	19087340	CNVD
Melanoma	18172304	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Wilms tumour	21544195	CNVD
Parathyroid adenoma	22454399	CNVD
Chordoma	21602918	CNVD
Breast cancer	21949216	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	19222835	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Beckwith-Wiedemann syndrome	21518781	CNVD
Wilms tumour	21518781	CNVD
Hepatoblastoma	21518781	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Gastric cancer	17908304	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Multiple myeloma	20724749	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Autism	22495311	CNVD
Ovine squamous-cell carcinoma	17599052	CNVD
Myelofibrosis	22110671	CNVD
Glioma	17123091	CNVD
Lung cancer	16773561	CNVD
Neuroblastoma	21124317	CNVD
Lung adenocarcinoma	17086460	CNVD
Lung cancer	17086460	CNVD
Schizophrenia	21399695	CNVD
Gastric cancer	16891809	CNVD
Cancer	17160897	CNVD
Multiple myeloma	16616336	CNVD
small cell lung cancer	20016488	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21785460	CNVD
Lung cancer	18438408	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:4821 , 50 per page) page: 1 2 3 4 5 6 7 ... 97

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:9742200-9779400	Weak transcription	Fetal Brain Male	brain
2	chr11:9745000-9775600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
3	chr11:9755000-9777600	Weak transcription	Colonic Mucosa	Colon
4	chr11:9755400-9769800	Weak transcription	Pancreas	Pancrea
5	chr11:9757400-9766400	Weak transcription	Rectal Mucosa Donor 31	rectum
6	chr11:9757400-9769200	Weak transcription	Rectal Smooth Muscle	rectum
7	chr11:9757600-9774600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
8	chr11:9758400-9769800	Weak transcription	Primary T cells fromperipheralblood	blood
9	chr11:9758400-9769800	Weak transcription	Stomach Mucosa	stomach
10	chr11:9758800-9769800	Weak transcription	Brain Anterior Caudate	brain
11	chr11:9758800-9776000	Weak transcription	Brain Germinal Matrix	brain
12	chr11:9759200-9769400	Weak transcription	Primary T helper cells fromperipheralblood	blood
13	chr11:9760600-9769800	Weak transcription	Fetal Heart	heart
14	chr11:9761000-9769400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
15	chr11:9761000-9777200	Weak transcription	Fetal Kidney	kidney
16	chr11:9761800-9772200	Weak transcription	Skeletal Muscle Female	skeletal muscle
17	chr11:9762200-9769400	Strong transcription	Breast Myoepithelial Primary Cells	Breast
18	chr11:9762200-9769400	Weak transcription	Ovary	ovary
19	chr11:9762200-9771600	Weak transcription	Aorta	Aorta
20	chr11:9762400-9767200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
21	chr11:9762400-9769200	Weak transcription	Skeletal Muscle Male	skeletal muscle
22	chr11:9762400-9769800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
23	chr11:9762400-9772000	Weak transcription	Gastric	stomach
24	chr11:9762400-9777200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
25	chr11:9762400-9777400	Weak transcription	Esophagus	oesophagus
26	chr11:9762400-9777400	Weak transcription	Right Ventricle	heart
27	chr11:9762400-9779400	Weak transcription	Liver	Liver
28	chr11:9762400-9779400	Weak transcription	Psoas Muscle	Psoas
29	chr11:9762600-9767200	Weak transcription	Brain Inferior Temporal Lobe	brain
30	chr11:9762600-9769000	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
31	chr11:9762600-9769200	Weak transcription	Duodenum Mucosa	Duodenum
32	chr11:9762600-9769800	Weak transcription	Brain Angular Gyrus	brain
33	chr11:9762600-9769800	Weak transcription	Brain Cingulate Gyrus	brain
34	chr11:9762600-9769800	Weak transcription	Brain Hippocampus Middle	brain
35	chr11:9762600-9779200	Weak transcription	Primary neutrophils fromperipheralblood	blood
36	chr11:9762800-9769800	Weak transcription	Placenta Amnion	Placenta Amnion
37	chr11:9762800-9779400	Weak transcription	Fetal Brain Female	brain
38	chr11:9763000-9769800	Weak transcription	Brain Substantia Nigra	brain
39	chr11:9763000-9770000	Weak transcription	Small Intestine	intestine
40	chr11:9763200-9766600	Weak transcription	Stomach Smooth Muscle	stomach
41	chr11:9763200-9767400	Weak transcription	Fetal Thymus	thymus
42	chr11:9763200-9768800	Weak transcription	Hela-S3	cervix
43	chr11:9763200-9769400	Weak transcription	Fetal Muscle Trunk	muscle
44	chr11:9763200-9773600	Weak transcription	HepG2	liver
45	chr11:9763200-9775200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
46	chr11:9763400-9766600	Weak transcription	Monocytes-CD14+_RO01746	blood
47	chr11:9763400-9769200	Weak transcription	Duodenum Smooth Muscle	Duodenum
48	chr11:9763400-9769400	Weak transcription	Colon Smooth Muscle	Colon
49	chr11:9763600-9772000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
50	chr11:9763600-9779400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

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