Variant report

Variant	esv3384610
Chromosome Location	chr6:167197619-167198251
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 106 )
Associated
traits (count: 82 )

Variant overlapped rSNPs/rCNVs (count:106 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs575922999	chr6:167197621-167197622	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs543098311	chr6:167197632-167197633	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs564876537	chr6:167197640-167197641	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs532145540	chr6:167197650-167197651	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs541088789	chr6:167197653-167197654	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs560012091	chr6:167197665-167197666	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs530272400	chr6:167197670-167197671	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs556226700	chr6:167197682-167197683	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs113180993	chr6:167197686-167197687	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs143312122	chr6:167197687-167197688	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs200641939	chr6:167197717-167197718	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs79904542	chr6:167197719-167197720	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs201680620	chr6:167197749-167197750	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs79698189	chr6:167197751-167197752	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs199973723	chr6:167197781-167197782	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs552316514	chr6:167197782-167197783	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs111929522	chr6:167197783-167197784	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs553020889	chr6:167197790-167197791	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs565549642	chr6:167197791-167197792	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs536083517	chr6:167197792-167197793	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs113584293	chr6:167197802-167197803	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs554341279	chr6:167197810-167197811	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs201173154	chr6:167197813-167197814	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs4710097	chr6:167197815-167197816	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs558286017	chr6:167197821-167197822	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs576746400	chr6:167197824-167197825	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs367995349	chr6:167197825-167197826	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs559448442	chr6:167197830-167197831	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs574572562	chr6:167197831-167197832	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs200882931	chr6:167197840-167197841	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs542487042	chr6:167197843-167197844	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs563847624	chr6:167197844-167197845	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs200029321	chr6:167197856-167197857	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs552800468	chr6:167197863-167197864	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs564345042	chr6:167197864-167197865	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs76081081	chr6:167197873-167197874	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs546582174	chr6:167197876-167197877	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs374143509	chr6:167197877-167197878	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs181183432	chr6:167197878-167197879	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs535533629	chr6:167197884-167197885	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs548015839	chr6:167197885-167197886	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs569800436	chr6:167197886-167197887	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs536969736	chr6:167197887-167197888	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs201173702	chr6:167197888-167197889	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs576775155	chr6:167197895-167197896	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs534651837	chr6:167197903-167197904	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs552999478	chr6:167197905-167197906	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs113485678	chr6:167197909-167197910	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs574609941	chr6:167197910-167197911	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs541929989	chr6:167197917-167197918	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:82)

Disease	PMID	Source
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Neuroblastoma	18923191	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Melanoma	18172304	CNVD
Cancer	21637783	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	19010834	CNVD
Non-small cell lung cancer	21044232	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21385341	CNVD
Prostate cancer	16705090	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Colorectal cancer	16272173	CNVD
Ependymoma	16718352	CNVD
Gastric cancer	17908304	CNVD
High-proliferative meningiomas	17937814	CNVD
Intracranial tumor	16823260	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	16272173	CNVD
Wilms tumour	21544195	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Malignant melanoma	18718029	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Breast cancer	21858162	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	17603634	CNVD
Developmental delay	19490664	CNVD
Burkitt''s lymphoma	18698080	CNVD
Neurodevelopmental disorder	22521361	CNVD
small cell lung cancer	20016488	CNVD
Adenoid cystic carcinoma	18698036	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Leukemia	18688285	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Prostate cancer	18632612	CNVD
Lung cancer	18438408	CNVD
Burkitt''s lymphoma	19759907	CNVD
Esophageal cancer	21851588	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Breast cancer	17133270	CNVD
Testicular germ cell tumor	18059402	CNVD
Developmental delay	21147756	CNVD
Chordoma	18071362	CNVD
Glioblastoma multiforme	19435819	CNVD
Ovarian cancer	21720365	CNVD
abnormal development	18461090	CNVD
Epilepsy	22083797	CNVD
Myelofibrosis	22110671	CNVD
chordoma	19801981	CNVD
Myxofibrosarcoma	16751306	CNVD
Autism	17483303	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Acute myeloid leukemia	19651601	CNVD
Sudden cardiac death	19188705	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
Ependymoma	20639864	CNVD
Autism	22549408	CNVD

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:167182200-167218600	Weak transcription	Right Atrium	heart
2	chr6:167196400-167198600	Weak transcription	Brain Inferior Temporal Lobe	brain

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