Variant report

Variant esv3384748
Chromosome Location chr19:56727320-56744483
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:317 , 50 per page) page: 1 2 3 4 5 6 7
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:56723600-56727400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr19:56724400-56728400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr19:56725200-56727400 Weak transcription A549 lung
4 chr19:56727400-56727600 ZNF genes & repeats A549 lung
5 chr19:56727400-56727800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr19:56727400-56728200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr19:56727600-56735800 Weak transcription A549 lung
8 chr19:56727800-56728000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr19:56727800-56729000 Enhancers Dnd41 blood
10 chr19:56728000-56728400 Enhancers H1 Cell Line embryonic stem cell
11 chr19:56728000-56728400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
12 chr19:56728000-56728400 Enhancers Primary hematopoietic stem cells short term culture blood
13 chr19:56728000-56728400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
14 chr19:56728000-56728400 Enhancers Cortex derived primary cultured neurospheres brain
15 chr19:56728000-56728400 Enhancers Esophagus oesophagus
16 chr19:56728000-56728800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr19:56728000-56729400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr19:56728200-56728400 Enhancers HUES48 Cell Line embryonic stem cell
19 chr19:56728200-56728400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr19:56728200-56728400 Enhancers Primary hematopoietic stem cells blood
21 chr19:56728200-56728400 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr19:56728200-56728400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr19:56728200-56728400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr19:56728200-56728400 Enhancers HMEC breast
25 chr19:56728200-56728400 Enhancers HUVEC blood vessel
26 chr19:56728200-56728600 Bivalent Enhancer Thymus Thymus
27 chr19:56728200-56728800 Bivalent Enhancer Placenta Placenta
28 chr19:56728200-56728800 Bivalent Enhancer Fetal Thymus thymus
29 chr19:56728200-56729200 Active TSS Rectal Mucosa Donor 31 rectum
30 chr19:56728200-56729400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr19:56728200-56729400 Enhancers Fetal Heart heart
32 chr19:56728400-56728600 Flanking Bivalent TSS/Enh iPS-15b Cell Line embryonic stem cell
33 chr19:56728400-56728600 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
34 chr19:56728400-56728600 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr19:56728400-56728600 Bivalent Enhancer Primary monocytes fromperipheralblood blood
36 chr19:56728400-56728600 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
37 chr19:56728400-56728600 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
38 chr19:56728400-56728600 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr19:56728400-56728600 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin03 Skin
40 chr19:56728400-56728600 Bivalent/Poised TSS Brain Angular Gyrus brain
41 chr19:56728400-56728600 Bivalent Enhancer Brain Germinal Matrix brain
42 chr19:56728400-56728600 Flanking Bivalent TSS/Enh Brain Hippocampus Middle brain
43 chr19:56728400-56728600 Bivalent Enhancer Brain Inferior Temporal Lobe brain
44 chr19:56728400-56728600 Flanking Active TSS Esophagus oesophagus
45 chr19:56728400-56728600 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
46 chr19:56728400-56728600 Bivalent Enhancer Fetal Brain Female brain
47 chr19:56728400-56728600 Flanking Active TSS Fetal Lung lung
48 chr19:56728400-56728600 Flanking Active TSS Fetal Muscle Trunk muscle
49 chr19:56728400-56728600 Bivalent Enhancer Fetal Stomach stomach
50 chr19:56728400-56728600 Enhancers Left Ventricle heart

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